Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2057 ATGGTAATTGAAATTGCAGTGTTTATTTTACTATCATTTTTGTGGGGTTTATGGGTGTGGCGCCGCCGTGGAGCGACGGCCGATGAGCAGCTTCCACCGGGACCGCCTCGTTGGCCGGTGGTTGGAAACTTACTCCAACTCAGTTTTTCCGCTCACGAATCCTTCACAAAACTCGCCGCCAAGTACGGCCCAATCATGACCCTCCAACTCGGATCAATGAAAACGATAGTCATTTCCTCAAGCACGGCGGCGCGTGAGATATTCAAAAACCACGACGCGCCGCTGTCAGGGAGAATGATTTACGAAGCAATGAAAGGGGACCACGGCACAGAAGGCTCCTTAATCACCTCCCAATACGGGCCGCACTGGCGGATGCTACGGCGACTGGCAACGTCAGAGTTCTTTGTCACCCGCCAGCTGGAAGCCATGAAACACGTCCGCCGCCGCTGCATTGACACCATGATCCGGCATGTGCAGGAGGAAACAGAAGTTGGCGAGGGCGGCGCGTGTGGGAACGTGGCGCCGTTGGACGTGGGGAAATTCATGTTCACAATGAGCTTTAATTTAATCGGGAATTTAATATTTTCAAAAGATTTATTGGAGGCAAATTCGAAGAGGGGAAAGGAATTTTATTACCATACGAGAAAAGTGATGGAGATGGCCGGAAAGCCGAATGTGGCGGACTTTTTGCCGGCGTTACGGTGGGTGGATCCGCAGGGGATTAGGAGGAAGACGCAATTTCATGTGAATAAAGCGTTTGAAATTGCTGGGGAATTTATAAAAGAGAGATTATTAATAAGGGAAAAAAGGAATATTATTATTATTAGTGATGAGAAAATTGAAGAAAGGAAAAAGGATTATTTGGATGTGCTTTTGGAGTTTCGTGGCGATGGGGTTGAGGAGCCTTCTCATTTCTCTTCTTGGATCATCAACGTTATCGTCTTCGAGATGTTCACGGCGGGGACGGACACCACCACCAGTACACTAGAATGGGCAATGGCAGAGCTCCTCCACAACCCAGCGGCGCTGCAGAAACTTCAGGCGGAGCTACGAGCCACCATCCCCCCGAACGGCAACCTCGAAGAAACCCATTTCCAAAACCTCCCATATCTCGATGCCGTCGTCAAAGAAACCCTCCGCCTCCACCCCCCGCTGCCGTTCCTCTTCCCAAGAATGGCAATGAAGCCCTGCAAAATTCTCGGCTACCGGATTCCGGCTGAAACGCAAGTCTTGGTCAACTTCTGGGCCATCGGCCGTGACCCCAAAAACTGGAAAGACCCTTTGGTTTTCTCACCGGAGAGATTCTTGGATCCTACAGGTGGCAAGGATTTCAAAGGTCAACACTTTGACTTCATTCCGTTTGGCTCCGGCCGCCGCATGTGCCCGGCGGTGCCGCTGGCGTCGAGGGTTCTTCCAATGGCTCTGGGGTCGTTGGTTCTGTCGTTTGATTGGGATCTGCCGGACGGAGTTTCGGCGGAGGAGATGGACATGTCGGAGCAATTGGGGATTACGCTTCGAAAGAAAATTCCTTTGAAGGCCATTCCGACTCCACACAAACGACGTTGTTTGGATTAG 1575 51.17 MVIEIAVFILLSFLWGLWVWRRRGATADEQLPPGPPRWPVVGNLLQLSFSAHESFTKLAAKYGPIMTLQLGSMKTIVISSSTAAREIFKNHDAPLSGRMIYEAMKGDHGTEGSLITSQYGPHWRMLRRLATSEFFVTRQLEAMKHVRRRCIDTMIRHVQEETEVGEGGACGNVAPLDVGKFMFTMSFNLIGNLIFSKDLLEANSKRGKEFYYHTRKVMEMAGKPNVADFLPALRWVDPQGIRRKTQFHVNKAFEIAGEFIKERLLIREKRNIIIISDEKIEERKKDYLDVLLEFRGDGVEEPSHFSSWIINVIVFEMFTAGTDTTTSTLEWAMAELLHNPAALQKLQAELRATIPPNGNLEETHFQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKILGYRIPAETQVLVNFWAIGRDPKNWKDPLVFSPERFLDPTGGKDFKGQHFDFIPFGSGRRMCPAVPLASRVLPMALGSLVLSFDWDLPDGVSAEEMDMSEQLGITLRKKIPLKAIPTPHKRRCLD 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35268139 35272856 + CrPI670011_10g020570.1 Cre10g2057 511359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2057 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 SUPERFAMILY Cytochrome P450 32 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre10g2057 524 CDD CYP76-like 59 515 - -
Cre10g2057 524 Pfam Cytochrome P450 32 505 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 519 - -
Cre10g2057 524 FunFam Cytochrome P450 76C4 23 514 - -
Cre10g2057 524 Gene3D Cytochrome P450 20 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g2057 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g2156 Cre-Chr9:40569090 Cre10g2057 Cre-Chr10:35268139 5.60E-72 dispersed
Cre09g2185 Cre-Chr9:40901272 Cre10g2057 Cre-Chr10:35268139 1.80E-69 dispersed
Cre09g2186 Cre-Chr9:40910547 Cre10g2057 Cre-Chr10:35268139 1.40E-37 dispersed
Cre10g1760 Cre-Chr10:31998110 Cre10g2057 Cre-Chr10:35268139 9.50E-73 dispersed
Cre10g1847 Cre-Chr10:33044805 Cre10g2057 Cre-Chr10:35268139 4.80E-77 dispersed
Cre10g2057 Cre-Chr10:35268139 Cre11g0531 Cre-Chr11:2326206 2.80E-91 dispersed
Cre10g2057 Cre-Chr10:35268139 Cre07g1255 Cre-Chr7:26308016 4.40E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2057 - - - 0.0