Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g2103 | ATGAAATGGGCCTTGGCCCAAATTTGTCCTTCAAATTTCAGACCGTACAGAACTTTCACTTCGGCGATTCGCTTAGATAAACAGAGAAAGGGGGTTTTAGGTCCCCGGAAGGACGAAGAAGCATTATCAGTCGGAAATCGGGATCCGGTAAAGAAGCAACGCCGAAGTTCGACGGCGATGGATAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGGCCTCGGCACAAAATGAAGCTATCGATCGCAGAGAGCGTCTTCGACGGCTGGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTATTTTATGCGGAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGTAATTACTTGGCGCACACGCAGGGGAAGCGGCATCAGACTAATTTGGCTAAGAGAGCTGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGCGGAAGGTCTCTGTTCGCAAAACAGTTAAAATTGGAAGGCCTGGTTATCGAGTTACAAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTCCTTTTTCAGATTGAATATCCTGAAATTGAAGACCTAGCAAAGCCTAGGCATCGTTTTATGTCCTCTTATGAACAGCGTGTGCAACCTTTTGACAAAAGATACCAATATCTTCTGTTTGCAGCTGAACCATATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATTGACAAATCAACTCCAAAATTCTTCTCACACTGGGATCCGGACTCAAAAATGTTCACGTTGCAATTGTATTTCAAATCCAAGCCACAAGAGGCAAACAAGCCACCACCTGTGCCTGCAGCCAACGGAACAGTGCCATCTGCTGCACCACCAAGGCCATTGCCGCCGCCACCACAAGCTCCACCACCGCCACCACCTCCAACACAGCAAGGAGCACCACCAAGAGTCCCTCCCCCTCCGATGCCTGGGTCCTTGCCACCTCCCCCTTCTGTAATGGCCAATGGTCCTAGGCCAATGCCTCCTGGTGGGGCTCCGCCCATCCCTCCGCCACCTCCAGTTGGTAATAACACAATGGCGAATTTCACTCCTGGTACTCAGATGAATCGACCTCCCATGCCACCTCCCCCACAGGGCTTCCCAGGTCAGGGTATCCGGCAGCCGCCGCCACCACCACCCAATATGGGCTAG | 1200 | 51.33 | MKWALAQICPSNFRPYRTFTSAIRLDKQRKGVLGPRKDEEALSVGNRDPVKKQRRSSTAMDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSAAPPRPLPPPPQAPPPPPPPTQQGAPPRVPPPPMPGSLPPPPSVMANGPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG | 399 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35647119 | 35650150 | - | CrPI670011_10g021030.1 | Cre10g2103 | 511405 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g2103 | 399 | MobiDBLite | consensus disorder prediction | 30 | 80 | - | - | |
Cre10g2103 | 399 | SMART | CactinC_cactus_3 | 148 | 275 | - | - | |
Cre10g2103 | 399 | MobiDBLite | consensus disorder prediction | 30 | 61 | - | - | |
Cre10g2103 | 399 | MobiDBLite | consensus disorder prediction | 371 | 399 | - | - | |
Cre10g2103 | 399 | MobiDBLite | consensus disorder prediction | 274 | 399 | - | - | |
Cre10g2103 | 399 | Pfam | Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) | 169 | 263 | IPR031781 | - | |
Cre10g2103 | 399 | PRINTS | Proline rich extensin signature | 295 | 311 | - | - | |
Cre10g2103 | 399 | PRINTS | Proline rich extensin signature | 333 | 358 | - | - | |
Cre10g2103 | 399 | PRINTS | Proline rich extensin signature | 314 | 331 | - | - | |
Cre10g2103 | 399 | PRINTS | Proline rich extensin signature | 274 | 295 | - | - | |
Cre10g2103 | 399 | Pfam | Zinc-finger of C2H2 type | 111 | 135 | IPR013087 | - | |
Cre10g2103 | 399 | Gene3D | - | 152 | 278 | - | - | |
Cre10g2103 | 399 | ProSiteProfiles | Zinc finger matrin-type profile. | 111 | 141 | IPR000690 | GO:0003676(InterPro)|GO:0005634(InterPro)|GO:0008270(InterPro) | |
Cre10g2103 | 399 | MobiDBLite | consensus disorder prediction | 276 | 360 | - | - | |
Cre10g2103 | 399 | Gene3D | Classic Zinc Finger | 105 | 148 | - | - | |
Cre10g2103 | 399 | PANTHER | SPLICING FACTOR 3A SUBUNIT 2 | 60 | 396 | IPR052092 | GO:0000245(PANTHER)|GO:0005686(PANTHER)|GO:0071004(PANTHER)|GO:0071013(PANTHER) | |
Cre10g2103 | 399 | FunFam | Splicing factor 3a subunit 2 | 153 | 277 | - | - | |
Cre10g2103 | 399 | SMART | ZnF_U1_5 | 108 | 142 | IPR003604 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cre10g2103 | 399 | SUPERFAMILY | beta-beta-alpha zinc fingers | 107 | 142 | IPR036236 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g2103 | K12826 | - | csv:101202831 | 465.692 |