Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2113 ATGGCCGCCTCAAATTCCACCTCCCCCAACCCCTTCTGGTACCAGTTGCTCTTTGGCCGGTGGTTCTCTGTTTTTGCTTCCATTCTCATCATGTCCGTCTCCGGCGCCACCTATATGTTCGGCCTCTACTCCTCCGACATCAAATCCTCCTTAGGCTACGACCAAACCACCGTCAATTTGCTCAGCTTCTTCAAGGACTTAGGCGGCAATGTCGGCGTCATCAGCGGCCTCATCAACGAGGTCGCTCCGGCCTGGATCGTTCTTCTCATCGGCGCCATCATGAACCTTTTCGGCTACACCATGATTTGGCTGGCTGTAACCAATCGGATCCCCAAGCCCCAGATCTGGCATATGTGTCTCTACATTTGTATAGGAGCTAATTCTCAGACCTTTGCTAATACAGGGGCTCTTGTAACCTCCGTCAAAAACTTCCCGGAAAGTCGTGGTAGCGTTTTGGGACTTTTGAAGGGATTCGTCGGCTTAAGCGGCGCTATTTTGTCCCAGCTTTTCCATGCCTTTTATGGCAACAACTCCAAGTCTCTTATCCTCTTAATCGCTTGGCTTCCTGCAGCCGTCTCTGTTACTTTCCTCCGTTTCGTTCGCATCATTAAGGATCTCCGGCAGCCCAACGAGCTCAAAGTTTTTTACCATATCCTTTATATTTCTCTTAGCCTTGCTGGGTCGTTAATGGTTTTGATTATTTTGCAAAATCGTCTCCGATTTCAACAAATACAATACGCGGGAAGTGTCATCGTCGTGATTGTTCTGCTTCTACTGCCTCTAGCCATTGTTTTCAGAGAGGAATTGAGTGTTTGGAAGAATAAAACCGCAGGTTCAATTTTACAATTAGAGCTAGCATCACAACAACCACTCCCACCAGCGACTTCGGTGGTGCCACCAGCGCCGCCGAGCCCTCCCTCGGGCTCTTGTTTTAAAAACACGTTTAAACCCCCAAACAGAGGAGAAGATTACACAATTCCACAAGCCATTTTCAGCATCGATATGATAATTATTTTTATCGCCACAATTTGTGGTGTCGGTGGAACATTGACGGCAATCGACAATTTGGGCCAAATCGGAGAGTCTTTAGGATACCCATCTCACAGTACCACCACATTCATCTCTCTTGTCAGCATATGGAATTACCTCGGCCGTGTAGTCTCCGGATTCGTATCAGAATATTTCTGGAAAAAGTACAAAGTCCCACGTCCTCTATTTCTCTTCGCGACACTTATTTTATCCTGCGTCGGCCATCTTCTAATCGCATTCGGAGTTCCAAATTCGCTGTATTTTTCTTCAATCATAATTGGGTTCTGCTTTGGTGCACAATGGCCGTTGATCTTCGCAATCATATCGGAAATTTTCGGGCTGAAGTACTACGCAACTCTATACAATTTGGGAGGAACGGCGAGCCCGATTGGGGCGTATATTATGAGCGTGAGAGTGGCGGGTCATTTGTACGACAAAGAGGCGCAGCGACAGATGGAGACGGCGGGACGACGGAGAAAAATAGGAGAGGATTTGATTTGCTTGGGAGTGGAATGTTATAGAAAGGCGTTTCTTATAATCACGGCAGCGACGGTGTTGGGAGGACTTGTTTCGCTGATTTTGGTTGTTCGGACATGGAAGTTTTATAAGGGCGATATTTACAGGAAGTTCAGGGAGGAGGAAGGTGAAGACGTAGACATGAAAATTGCCGCTCCAACAAATAGTGTGTTGACGGCCACAAAATCTGAATCTGTTTAG 1746 47.08 MAASNSTSPNPFWYQLLFGRWFSVFASILIMSVSGATYMFGLYSSDIKSSLGYDQTTVNLLSFFKDLGGNVGVISGLINEVAPAWIVLLIGAIMNLFGYTMIWLAVTNRIPKPQIWHMCLYICIGANSQTFANTGALVTSVKNFPESRGSVLGLLKGFVGLSGAILSQLFHAFYGNNSKSLILLIAWLPAAVSVTFLRFVRIIKDLRQPNELKVFYHILYISLSLAGSLMVLIILQNRLRFQQIQYAGSVIVVIVLLLLPLAIVFREELSVWKNKTAGSILQLELASQQPLPPATSVVPPAPPSPPSGSCFKNTFKPPNRGEDYTIPQAIFSIDMIIIFIATICGVGGTLTAIDNLGQIGESLGYPSHSTTTFISLVSIWNYLGRVVSGFVSEYFWKKYKVPRPLFLFATLILSCVGHLLIAFGVPNSLYFSSIIIGFCFGAQWPLIFAIISEIFGLKYYATLYNLGGTASPIGAYIMSVRVAGHLYDKEAQRQMETAGRRRKIGEDLICLGVECYRKAFLIITAATVLGGLVSLILVVRTWKFYKGDIYRKFREEEGEDVDMKIAAPTNSVLTATKSESV 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35730619 35732364 - CrPI670011_10g021130.1 Cre10g2113 511415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2113 581 CDD MFS_Mch1p_like 19 530 - -
Cre10g2113 581 Pfam Nodulin-like 20 265 IPR010658 -
Cre10g2113 581 SUPERFAMILY MFS general substrate transporter 24 547 IPR036259 -
Cre10g2113 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 20 554 - GO:0016020(PANTHER)
Cre10g2113 581 Gene3D MFS general substrate transporter like domains 327 544 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1490 Cre-Chr2:27012904 Cre10g2113 Cre-Chr10:35730619 8.00E-86 dispersed
Cre06g2518 Cre-Chr6:32857726 Cre10g2113 Cre-Chr10:35730619 4.10E-87 dispersed
Cre06g2519 Cre-Chr6:32862977 Cre10g2113 Cre-Chr10:35730619 1.40E-84 dispersed
Cre10g2113 Cre-Chr10:35730619 Cre11g1194 Cre-Chr11:9775162 2.20E-81 dispersed
Cre10g2113 Cre-Chr10:35730619 Cre10g2117 Cre-Chr10:35756615 2.00E-114 proximal
Cre04g0330 Cre-Chr4:9582130 Cre10g2113 Cre-Chr10:35730619 5.10E-160 transposed
Cre10g2113 Cre-Chr10:35730619 Cre04g1033 Cre-Chr4:28929595 1.50E-207 wgd
Cre10g2113 Cre-Chr10:35730619 Cre05g2306 Cre-Chr5:34613215 1.10E-192 wgd
Cre10g2113 Cre-Chr10:35730619 Cre08g0732 Cre-Chr8:20379496 1.10E-192 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2113 - - - 0.0