Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre10g2117 | ATGATAATTCTTTTTATCACCACAATCTGTGGCATCGGTGGAACATTGACGGCGATGGACAATTTGGGCCAAATCGGGGAGTCTTTGGGGTATCCATCTCACAGTACCACCATATTAATCTCTCTCGTGAGCATATGGAATTACCTAGGTCGTGTAGTCTCCGGATTCTTATCGGATTACTTCTGGAAAAAATACAAACTCCCACGTCCTTTGTTGCTCTTCGCGACGCTTATTCTGTCCTGCGTGGGTCATCTTCTAATCGCATTTGGAGTTCCGAATTCATTGTATTTTTCTTCAATCATATTCGGGTTATGCTTTGGCGCGCAGTGGCCCTTGATCTTAGCAATCATATCGGAAATATTTGGGTTGAAGTACTATGCAACTCTGTGCAATTTGGGAGGAGCGGCAAGCCCGATTGGGGCGTATATTATGAAAGTGAGAGTTGCAGGTCATTTGTACGACAGGGAGGCGGAGCGGCAGATGGTGGCTGCAGGGCAGCGGAGAAAAACAGGGGAGGACTTGAGTTGCTTGGGAGTGGAGTGTTACAGAAAGGCATTTCTTATAATCACAGGGGTGACGCTCTTGGGGGGACTTGTTTCCCTCATTTTGGTGGTTCGGACATGGAAGTTTTATAACACCAATATTTACAACAACTTCAAGGAGGAGGAAGGTGAAGGTGAAGATGTCGACATCAAAGTCGTCGCACCGACCGACAATGTGTTGACAACACCAAAAATTGAATCTATTTAG | 750 | 45.73 | MIILFITTICGIGGTLTAMDNLGQIGESLGYPSHSTTILISLVSIWNYLGRVVSGFLSDYFWKKYKLPRPLLLFATLILSCVGHLLIAFGVPNSLYFSSIIFGLCFGAQWPLILAIISEIFGLKYYATLCNLGGAASPIGAYIMKVRVAGHLYDREAERQMVAAGQRRKTGEDLSCLGVECYRKAFLIITGVTLLGGLVSLILVVRTWKFYNTNIYNNFKEEEGEGEDVDIKVVAPTDNVLTTPKIESI | 249 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 35756615 | 35757364 | + | CrPI670011_10g021170.1 | Cre10g2117 | 511419 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre10g2117 | 249 | Gene3D | MFS general substrate transporter like domains | 1 | 212 | IPR036259 | - | |
| Cre10g2117 | 249 | SUPERFAMILY | MFS general substrate transporter | 2 | 209 | IPR036259 | - | |
| Cre10g2117 | 249 | Pfam | Major Facilitator Superfamily | 5 | 205 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
| Cre10g2117 | 249 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 2 | 219 | - | GO:0016020(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre08g0732 | Cre-Chr8:20379496 | Cre10g2117 | Cre-Chr10:35756615 | 8.70E-81 | dispersed | |
| Cre10g2117 | Cre-Chr10:35756615 | Cre11g1194 | Cre-Chr11:9775162 | 6.20E-33 | dispersed | |
| Cre10g2113 | Cre-Chr10:35730619 | Cre10g2117 | Cre-Chr10:35756615 | 2.00E-114 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre10g2117 | - | - | - | 0.0 |