Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2117 ATGATAATTCTTTTTATCACCACAATCTGTGGCATCGGTGGAACATTGACGGCGATGGACAATTTGGGCCAAATCGGGGAGTCTTTGGGGTATCCATCTCACAGTACCACCATATTAATCTCTCTCGTGAGCATATGGAATTACCTAGGTCGTGTAGTCTCCGGATTCTTATCGGATTACTTCTGGAAAAAATACAAACTCCCACGTCCTTTGTTGCTCTTCGCGACGCTTATTCTGTCCTGCGTGGGTCATCTTCTAATCGCATTTGGAGTTCCGAATTCATTGTATTTTTCTTCAATCATATTCGGGTTATGCTTTGGCGCGCAGTGGCCCTTGATCTTAGCAATCATATCGGAAATATTTGGGTTGAAGTACTATGCAACTCTGTGCAATTTGGGAGGAGCGGCAAGCCCGATTGGGGCGTATATTATGAAAGTGAGAGTTGCAGGTCATTTGTACGACAGGGAGGCGGAGCGGCAGATGGTGGCTGCAGGGCAGCGGAGAAAAACAGGGGAGGACTTGAGTTGCTTGGGAGTGGAGTGTTACAGAAAGGCATTTCTTATAATCACAGGGGTGACGCTCTTGGGGGGACTTGTTTCCCTCATTTTGGTGGTTCGGACATGGAAGTTTTATAACACCAATATTTACAACAACTTCAAGGAGGAGGAAGGTGAAGGTGAAGATGTCGACATCAAAGTCGTCGCACCGACCGACAATGTGTTGACAACACCAAAAATTGAATCTATTTAG 750 45.73 MIILFITTICGIGGTLTAMDNLGQIGESLGYPSHSTTILISLVSIWNYLGRVVSGFLSDYFWKKYKLPRPLLLFATLILSCVGHLLIAFGVPNSLYFSSIIFGLCFGAQWPLILAIISEIFGLKYYATLCNLGGAASPIGAYIMKVRVAGHLYDREAERQMVAAGQRRKTGEDLSCLGVECYRKAFLIITGVTLLGGLVSLILVVRTWKFYNTNIYNNFKEEEGEGEDVDIKVVAPTDNVLTTPKIESI 249
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 35756615 35757364 + CrPI670011_10g021170.1 Cre10g2117 511419
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2117 249 Gene3D MFS general substrate transporter like domains 1 212 IPR036259 -
Cre10g2117 249 SUPERFAMILY MFS general substrate transporter 2 209 IPR036259 -
Cre10g2117 249 Pfam Major Facilitator Superfamily 5 205 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cre10g2117 249 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 219 - GO:0016020(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0732 Cre-Chr8:20379496 Cre10g2117 Cre-Chr10:35756615 8.70E-81 dispersed
Cre10g2117 Cre-Chr10:35756615 Cre11g1194 Cre-Chr11:9775162 6.20E-33 dispersed
Cre10g2113 Cre-Chr10:35730619 Cre10g2117 Cre-Chr10:35756615 2.00E-114 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2117 - - - 0.0