Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2148 ATGGTTTCTGATCGGGATGCCTTATTGCTGAAGTTCATCCCTTCTTTACTTGTTTACTCTTTACAAGGATTAATTCTCCTTTTGCAGGAGAATATGGCAACTAGAGGTCAAGGTGGTATCCAACAATTGCTTGCTGCGGAGCAAGAAGCACAACACATCGTCAATGCTGCCAGAAATGCAAAAATGGCTAGACTGAAACAAGCCAAAGAAGAGGCTGAAAAGGAAATTGCTGCATATCGCGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTTGCTGAGAGTAGTGGAGATTCAGGAGCTAATGTTAAGCGGCTTGAGATCGAGACAGATGAAAAGATTTATCACCTGAAAGAAGAGTCTGCGAGAATTTCACACGACGTTGTGAACATGCTTCTGAAGCACGTGACAACCGTGAAAAATTGA 423 42.79 MVSDRDALLLKFIPSLLVYSLQGLILLLQENMATRGQGGIQQLLAAEQEAQHIVNAARNAKMARLKQAKEEAEKEIAAYRAQVESEFQRKLAESSGDSGANVKRLEIETDEKIYHLKEESARISHDVVNMLLKHVTTVKN 140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36036397 36037231 + CrPI670011_10g021480.1 Cre10g2148 511450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2148 140 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 34 140 IPR005124 GO:0016471(InterPro)|GO:0016471(PANTHER)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cre10g2148 140 Gene3D - 30 140 - -
Cre10g2148 140 Pfam Vacuolar (H+)-ATPase G subunit 37 139 IPR005124 GO:0016471(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cre10g2148 140 NCBIfam V-type ATPase subunit G 32 139 IPR005124 GO:0016471(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cre10g2148 140 FunFam V-type proton ATPase subunit G 33 140 - -
Cre10g2148 140 Coils Coil 55 89 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1609 Cre-Chr8:28557465 Cre10g2148 Cre-Chr10:36036397 5.60E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2148 K02152 - csv:101216393 180.644