Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2155 ATGGCGGCCAAGAACCATTTGAGCTTTATTCTTCTTGTTGTTCTTTTGCAGCTCTTCTATTCAGGAAGGGGGGAATTGCAAATTAATTATTATGCAAAAAGTTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTGTTGATCTCTACTATGAACATGGAAACACTGCCGTTTCGTGGCTCAGAAATCTCTTCCATGATTGCGTTGTTAAGTCTTGCGATGCATCTCTATTATTGGACACAGTGGTGGGAGTGGAATCAGAGAAAGATTCAGACAGAAGTTTTGGGATGAGAAATTTCAAATACGTAAATAAGATCAAAGCTGCCGTTGAAAAAGAATGTCCTCTCACTGTTTCTTGTGCCGATATTGTTGCATTATCTGCTAGAGATGGCATAGTTATGTTAAAAGGGCCTCATATCGAGTTGAAAACAGGGAGAAGAGACAGCAAAGTGAGTTATTCAAATCTTGTTGAAGAGTTGGTTCCAAAGCACAATGAATCTCTTCTAAATGTTCTCTCCCGCTTTAACTCCATTGGCATTGATACTGAAGCAACCGTCGCTCTTTTAGGAGCCCACTCAGTAGGACGAGTCCACTGTGTAAACTTAGTGGAGAGATTATATCCAACAGTTGATCCAACCATTGATCCAGAATATGCAAAATACTTAAAACTTCGATGCCCAACGCCAAATCCTGATCCAAATGCAGTATTATATTCAAGAAACGACCGTAAAACTCCGATGATTTTGGATAATATGTACTATACTAATATACTCAAACACAAAGGGTTGCTCATAGTGGATCAAGAATTGGCTTCTAATCCTTTAACTTTACCTTATGTCAAGAAATTTGCTGCCGATAATCTCTATTTTCATGCCCAATTCTCTAGGGGAATTCGTTTGTTGTCTGAGAATAATCCCCTCACTGGAGATCAAGGTGAGATTAGGAAAGATTGTCGCTTTGTTAATTAA 969 38.6 MAAKNHLSFILLVVLLQLFYSGRGELQINYYAKSCPKAEEIIKQQVVDLYYEHGNTAVSWLRNLFHDCVVKSCDASLLLDTVVGVESEKDSDRSFGMRNFKYVNKIKAAVEKECPLTVSCADIVALSARDGIVMLKGPHIELKTGRRDSKVSYSNLVEELVPKHNESLLNVLSRFNSIGIDTEATVALLGAHSVGRVHCVNLVERLYPTVDPTIDPEYAKYLKLRCPTPNPDPNAVLYSRNDRKTPMILDNMYYTNILKHKGLLIVDQELASNPLTLPYVKKFAADNLYFHAQFSRGIRLLSENNPLTGDQGEIRKDCRFVN 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36096963 36101113 + CrPI670011_10g021550.1 Cre10g2155 511457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2155 322 FunFam Peroxidase 29 172 - -
Cre10g2155 322 Pfam Peroxidase 43 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PANTHER - 10 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 Gene3D - 29 322 - -
Cre10g2155 322 Gene3D Peroxidase, domain 2 162 301 - -
Cre10g2155 322 SUPERFAMILY Heme-dependent peroxidases 25 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre10g2155 322 FunFam Peroxidase 162 301 - -
Cre10g2155 322 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g2155 322 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g2155 Cre-Chr10:36096963 Cre04g1605 Cre-Chr4:34520778 5.10E-56 dispersed
Cre03g0759 Cre-Chr3:6448144 Cre10g2155 Cre-Chr10:36096963 4.00E-104 transposed
Cre10g2155 Cre-Chr10:36096963 Cre04g0981 Cre-Chr4:28411569 5.60E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2155 K00430 - csv:101215428 600.512