Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2156 ATGTTGAATTTCTCTCCAATTTCCTCATCCATTACCTTCACATTACTTCTTTTTTCCTTTTCCAATACTGGCATTTTAGATTTCACCGCCACCGTTGCCGCCGTTGAATTTGACTTCGGCACTGTCGCCCTCAGTAGTTTAAAGCTACTCGGCGATGCCCACTTGAACAACGGGAGCGTGAGGCTCACTCGAGACCTTGCCGTCCCAAATTCCGGCTCCGGCAGAGTCCTCTACGCCAAACCCATCAGATTCCGGCAGCCAGGGATTAATTACCTCGCCAGTTTCTCCACATTTTTCTCCTTCTCCGTCACTAATCTCAACCCGTCGTCGATCGGTGGTGGTTTGGCGTTTGTGATATCTCCAGACGCCGAAACGCTCGGCGGCGCTGGTGGGTTGTTGGGGCTGGCCGATGAGAGGGGATTGGGGTTCGTGGCGGTGGAATTCGACACGTTAATGGATGTGGAATTTAAAGACATTAATGGAAACCATGTGGGATTGGATTTGAACGAAATGGTTTCGTTAGAGGTTAAAGATCTTGACGGAATTGGAATCGATCTCAAAAGCGGCGATACCGTTAATTCGTGGATTGAATACGACGGGTTGGCTCGGATCTTCAAAATCTTCGTTTCTTATTCGAATTTGAAACCGACAGAACCTCTAATGTCGTTCAATCTCGATCTTGATCCGTATTTGAACGATTTTATGTACGTTGGATTTTCCGGTTCAACACAGGGGAGTACGGAAGTTCACAGTGTGGACTGGTGGAGCTTTACGTCGTCGTTTGACTCAAATTCACCACCTGGGTCGGTTCCGCCGCCGCCAACGACGACGCTGATGAACCCAACGGCGAATGTCGTTCGTTCACCGCCGCCGTCGCAACCGCCATCGGATTCAGATTCCGTCACGCAAAAGAACTCCAAGTCGACGTCCTGCCACAATGGGCTCTGTAAGCAAGGCGCTGGTGCAGTGGTCGGAGTTGTGACCGCGGGGGCTTTTGTTCTAGCATTATTTGCCGGCGGGTTAATTTGGGTATATTCCAAAAAGATCAAGCGGGTTAAAAAATCGGATTCCCTCGCTTCAGAAATCATCAAAATGCCTAAGGAATTCACATACAAGGAGCTCAAAATCGCTACCAAATGCTTCAATTCGAACAGAATCATCGGCCATGGCGCTTTTGGGACTGTTTATAAAGGGATTCTGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGTAGCCATAGTACACAAGGGAAAAATGAATTCCTCTCTGAACTTTCAATCATCGGAACTCTCCGCCACCGGAATTTAGTCCGTCTTCAAGGATGGTGTCACGAGAAAGGCGAAATTTTACTCGTTTACGATTTAATGCCAAATGGGAGTTTAGATAAAGCACTATTCGAAGCTAGAACGCCGCTGCCGTGGCCTCACCGGAGAAAAATCCTTCTAGGCGTCGCCTCTGCTTTGGCTTATTTGCATCAAGAATGTGAAAATCAAGTCATTCATAGAGACGTTAAAACCAGCAATATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGATTGGCCCGACAAGTGGAGCACGATAAATCGCCGGACGCTACCGTCGCCGCCGGTACAATGGGATACTTAGCGCCGGAATATCTCCTCACAGGACGAGCCACGGAAAAAACCGACGTGTTTAGCTTCGGCGCCGTCGTTCTCGAAGTCGCTAGCGGCAGACGGCCGATCGAAAAAGAGACTGCCGCCGTTGGCGGCGGCGGAAAATTCGGTGTCAACAGTAATTTGGTGGATTGGGTTTGGAGTTTACACCGGGAAGGCCGGTTGTTAACGGCGGCAGATGGGAGACTCGGCGGCGAGTTTGAGGAATCCGAGATGAGGAAAGTTTTGTTAGTTGGGTTAGCTTGTTCTCACCCGGATCCGATGACCCGACCCACGATGAGAGGCGTAGTGCAAATGTTAATCGGCGATGCGGAGATTCCGATCGTCCCTCGGTCTAAGCCGTCAACGAGCTTCAGTACTGCTCATTTGCTTCTCACTTTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCCATTTCCACTTCCTCGTCCGAGCACAGCTTCAAGGGCGAGGATTTAATCTCACTTGATGATCGGACGGCGGGAAATCCATCAATTGTTTGA 2178 49.82 MLNFSPISSSITFTLLLFSFSNTGILDFTATVAAVEFDFGTVALSSLKLLGDAHLNNGSVRLTRDLAVPNSGSGRVLYAKPIRFRQPGINYLASFSTFFSFSVTNLNPSSIGGGLAFVISPDAETLGGAGGLLGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNEMVSLEVKDLDGIGIDLKSGDTVNSWIEYDGLARIFKIFVSYSNLKPTEPLMSFNLDLDPYLNDFMYVGFSGSTQGSTEVHSVDWWSFTSSFDSNSPPGSVPPPPTTTLMNPTANVVRSPPPSQPPSDSDSVTQKNSKSTSCHNGLCKQGAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEIIKMPKEFTYKELKIATKCFNSNRIIGHGAFGTVYKGILPETGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKETAAVGGGGKFGVNSNLVDWVWSLHREGRLLTAADGRLGGEFEESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDAEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNGMIAISTSSSEHSFKGEDLISLDDRTAGNPSIV 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36108561 36110738 + CrPI670011_10g021560.1 Cre10g2156 511458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2156 725 Gene3D - 32 268 - -
Cre10g2156 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g2156 725 Gene3D Transferase(Phosphotransferase) domain 1 457 663 - -
Cre10g2156 725 CDD lectin_legume_LecRK_Arcelin_ConA 35 261 IPR001220 GO:0030246(InterPro)
Cre10g2156 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 457 675 - -
Cre10g2156 725 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 270 IPR013320 -
Cre10g2156 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 345 456 - -
Cre10g2156 725 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Cre10g2156 725 ProSiteProfiles Protein kinase domain profile. 381 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g2156 725 Gene3D Phosphorylase Kinase; domain 1 343 456 - -
Cre10g2156 725 PANTHER - 39 673 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)
Cre10g2156 725 Pfam Legume lectin domain 36 264 IPR001220 GO:0030246(InterPro)
Cre10g2156 725 MobiDBLite consensus disorder prediction 261 308 - -
Cre10g2156 725 CDD STKc_IRAK 387 657 - -
Cre10g2156 725 SMART serkin_6 381 657 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g2156 725 Pfam Protein kinase domain 382 585 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g2156 725 SUPERFAMILY Protein kinase-like (PK-like) 363 687 IPR011009 -
Cre10g2156 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 33 270 - -
Cre10g2156 725 ProSitePatterns Protein kinases ATP-binding region signature. 387 410 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g0673 Cre-Chr10:6374958 Cre10g2156 Cre-Chr10:36108561 8.20E-173 dispersed
Cre10g1880 Cre-Chr10:33394452 Cre10g2156 Cre-Chr10:36108561 1.30E-96 dispersed
Cre10g2156 Cre-Chr10:36108561 Cre10g2340 Cre-Chr10:37577691 5.50E-98 dispersed
Cre10g2156 Cre-Chr10:36108561 Cre10g2241 Cre-Chr10:36800090 7.40E-111 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64494 PF00069 Pkinase 5.60E-50 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2156 - - - 0.0