Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g2179 | ATGATTTGGATTCCTTGTTCTGGAAATTCAAACAGGAAACTCAAGTCCAAGAAATTGAAGAAGTTGGAATCTCAGAAGACTCGAGTTGATCCGATCAACGGGAAACTAAAAACAAATTCCTCCTTCAGTGAAAACTCCAAAGGTGGAGGATCTGATCCTATCAAGGCACAGATATTTTCCTTCCGGGAGTTGGCAGCTGCTACCAGGAATTTTAGGGCAGACTGTCTTTTGGGAGAAGGAGGTTTTGGTAGAGTTTACAAGGGAAAGTTAGAAAGCATCAATCAGGTTGTGGCAATCAAACAACTCGATCGCAATGGGTCGCAAGGGAACAGAGAGTTTCTTGTTGAAGTATTGATGTTAAGCCTGCTTCATCACCCAAATCTAGTTAATCTGATCGGTTATTGTGCTGATGGAGATCAAAGGCTTCTGATATATGAATATATGCCTCTAGGATCTTTAGACGACCATTTACATGACATTTCACCTGGTACAAAGGTTCTAGATTGGAATACAAGAATGAAAATAGCTGCTGGGGCAGCACGAGGGTTGGAATATTTGCATGACAAAGCTAGCCCGCCGGTTATTTATCGAGATTTAAAAAGTTCCAACATTCTGCTTGATAAAGGTTATCATCCCAAACTATCTGATTTTGGATTGGCCAAACTTGGGCCTGTTGGGGATAATACACATGTATCTACCAGAGTTATGGGTACTTACGGATATTGCGCTCCCGAGTATGCAATGACTGGTCAGTTAACTCTCAAGTCGGATGTTTATAGCTTCGGTGTTGTCCTTCTAGAAATCATAACAGGCAGGAAAGCAATTGATGATTCAAGAGCTGCAGGGGAGCAGAATTTGGTTTCTTGGGCAAGACCATTATTTAAAGACCGTCTGAGATTTGCTCAAATGGCAGATCCAATGCTTAGAGGCCAATACCCTTCAAGGGGTTTGTATCAGGCTCTTGCAATTGCAGCAATGTGTGTTCAAGAGCAGCCAAATATGCGACCCGTAATTGCCGATGTCGTCACAGCTTTATCTTATCTTGCTTCCCAAAGATACTACCCTGGTACGAACATACCCCACGACTCCCCTGGATCTGCTTGTACTCCTCCAAGAACCAACAGAGATTCTGATAGGAAGCTTAATGGGGGTAGAAGATACGACAGAAATCCAACTAAACGACTATAA | 1188 | 42.59 | MIWIPCSGNSNRKLKSKKLKKLESQKTRVDPINGKLKTNSSFSENSKGGGSDPIKAQIFSFRELAAATRNFRADCLLGEGGFGRVYKGKLESINQVVAIKQLDRNGSQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLIYEYMPLGSLDDHLHDISPGTKVLDWNTRMKIAAGAARGLEYLHDKASPPVIYRDLKSSNILLDKGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDDSRAAGEQNLVSWARPLFKDRLRFAQMADPMLRGQYPSRGLYQALAIAAMCVQEQPNMRPVIADVVTALSYLASQRYYPGTNIPHDSPGSACTPPRTNRDSDRKLNGGRRYDRNPTKRL | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 36331013 | 36333844 | + | CrPI670011_10g021790.1 | Cre10g2179 | 511481 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g2179 | 395 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 194 | 206 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g2179 | 395 | MobiDBLite | consensus disorder prediction | 358 | 395 | - | - | |
Cre10g2179 | 395 | Gene3D | Phosphorylase Kinase; domain 1 | 44 | 147 | - | - | |
Cre10g2179 | 395 | SMART | serkin_6 | 71 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g2179 | 395 | SUPERFAMILY | Protein kinase-like (PK-like) | 57 | 356 | IPR011009 | - | |
Cre10g2179 | 395 | MobiDBLite | consensus disorder prediction | 31 | 50 | - | - | |
Cre10g2179 | 395 | Pfam | Protein tyrosine and serine/threonine kinase | 75 | 344 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g2179 | 395 | PANTHER | OS07G0668900 PROTEIN | 25 | 357 | - | - | |
Cre10g2179 | 395 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 100 | IPR017441 | GO:0005524(InterPro) | |
Cre10g2179 | 395 | FunFam | Serine/threonine-protein kinase PBS1 | 148 | 362 | - | - | |
Cre10g2179 | 395 | MobiDBLite | consensus disorder prediction | 15 | 51 | - | - | |
Cre10g2179 | 395 | Gene3D | Transferase(Phosphotransferase) domain 1 | 148 | 356 | - | - | |
Cre10g2179 | 395 | MobiDBLite | consensus disorder prediction | 373 | 395 | - | - | |
Cre10g2179 | 395 | CDD | STKc_IRAK | 77 | 345 | - | - | |
Cre10g2179 | 395 | FunFam | Serine/threonine-protein kinase PBS1 | 44 | 147 | - | - | |
Cre10g2179 | 395 | MobiDBLite | consensus disorder prediction | 358 | 372 | - | - | |
Cre10g2179 | 395 | ProSiteProfiles | Protein kinase domain profile. | 71 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g0524 | Cre-Chr3:3834706 | Cre10g2179 | Cre-Chr10:36331013 | 3.00E-144 | dispersed | |
Cre05g0718 | Cre-Chr5:6341480 | Cre10g2179 | Cre-Chr10:36331013 | 2.20E-149 | dispersed | |
Cre06g0954 | Cre-Chr6:3014227 | Cre10g2179 | Cre-Chr10:36331013 | 2.30E-145 | dispersed | |
Cre09g0865 | Cre-Chr9:8651998 | Cre10g2179 | Cre-Chr10:36331013 | 5.30E-131 | dispersed | |
Cre10g0763 | Cre-Chr10:7436416 | Cre10g2179 | Cre-Chr10:36331013 | 2.90E-132 | dispersed | |
Cre10g1311 | Cre-Chr10:26393469 | Cre10g2179 | Cre-Chr10:36331013 | 9.70E-87 | dispersed | |
Cre10g2179 | Cre-Chr10:36331013 | Cre11g2267 | Cre-Chr11:34447006 | 2.90E-125 | dispersed | |
Cre10g2179 | Cre-Chr10:36331013 | Cre02g2377 | Cre-Chr2:37166934 | 2.90E-133 | wgd | |
Cre10g2179 | Cre-Chr10:36331013 | Cre02g1692 | Cre-Chr2:29975035 | 4.10E-164 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64496 | PF07714 | PK_Tyr_Ser-Thr | 1.40E-46 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g2179 | - | - | - | 0.0 |