Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g2180 | ATGGCTGCTCTCGTGGAAGAGGTTCTACCTCCGTCGTTGGATGCCACCGCCGAACAACCTCCTCTGTTCGACGGAACTACTAGGTTATATACTGCTTACATATGCCCCTATGCTCAACGTGTGTGGATCACCCGAAATTACAAGGGACTACAAGATAAAATTAAGCTAGTTCCTCTCAACCTTTATAACAGGCCTGACTGGTATAAGGAGAAAGTATACCCTATAAACAAGGTGCCATCTCTAGAACATAATGGGAAAGTTATTGGAGAAAGTCTTGATCTGATCAAATATGTTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATGATCCTGCTAAAAGAGAGTATGCTGAAGAGTTGCTATCCTACAGCGATACGTTTAACATCGCAGTAGCTTCTTCATTTAAAGGCGACACCGCAAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCTTTGCAAAAATTTGATGGCCCCTTCTTCCTTGGAGAGATCAGTCAGGTGGATATAGCATACATTCCATTTGTTGAAAGGTTCCAGGTTTTCTTATTAGAGGCTCTCAAGATTGACATCACAGAAGGAAGGCCTAAGCTAGCTGCATGGATTGAGGAGCTCAATAAGATTGATGCGTATAAGCAAACAAAAGCTGATCCCAAGCTAATTGTTGAAGCTTATACAAAGCGATTTTTGGTTGAAGAGATGATACGAATAAATTACCCAACATGTGGACGGGAATTTTTCGATGTTTGTTCTGTACTTTCTATGTATTTTGGTGTGTTTGAAGCAATTAGTTTGTATGTCGCTGCTCGCGTTCGCTTCCTCCGATTCCCTATACATACATCTCTCAATGAAGCGGCCATATATCTCATTCGAAGAACATCCATGGCGTCCCCCTACGTGGAAGAAATTCCACCTCCGTCGTTGGATGCCACCGCCGAACAACCTCCCCTGTTTGATGGAACTACCAGGTTGTACACTGCTTACATTTGCCCTTATGCACACCGTGTTTGGATCATCCGGAATTACAAGGGACTACAACATAAAATTAAGCTTGTTCCTCTCAATCTTATTAATAGGCCTGACTGGTATAAGGAGAAAGTGTACCCTATGAACAAGGTGCCATCTCTGGAACATAATGGAAAAGTTATCGGAGAAAGCCTTGATCTGCTCAAATATATTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATCCTGCTAAAAGAGAGTATGCCGAAGAGTTGCTATCCTACGGCGAAACGTTTAACGGCGCAATAATCGATTCGTTTAAAGGTGACACCGCTAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCTTTGGGAAAATTTGATGGCCCGTTCCTCCTTGGAGAAATCAGCCAGGTGGATATAGCATACATTCCATTTGTTGAAAGGTTCCACATTTTCTTATTAGAGGCTCTCAAAATTGACATCACAGAAGGAAGGCCTAAATTACTTGCCTGGATTGAGGAGTTCAATAAGATTGATGCGTACAAGCAAACAAAAGTTGATCCCAAGTTGGTCGTTGAAATTTATTCAATGCGATTCTTGGGCACAGTGGAACGTTATCAAAACCCTCCGCACCATAACGCATCTCCTGATGGGCGCTGTAACGCCGTCCATTTTCATCTTCGCGCCATGAAAATTTTTAGAGCTTTAGAGAGAGAAAGAGAGAAGGAGAGACCGAAGAAACCGATCTACCTTCTCCACCCGCTAATGGCGGAGAGGAGCATTCACATGCTCCACATTCTCGAGCCGAGAAGGGATGCCTATGGATTTGCTCTGAGACCTCAACACACGCATAGATATAGAGAGCATGCTAACATTTACAAGGAGGAAGAAGAGGAAAGGTGTGATAAGTGGAAGAACTTTCTTGATCAAGTAGCTACATCATTTCAAGTGTGTCCTCTTGAGGAGGCAAATACAAATACACTGCAGGCTGAAACTAGCGAGCACCAAGAAGAGACCGTATCGGGGAGGAGTAGCACAGGGGATGACTCAACTGGCTCAAACTCTGATTCTGTTGACACCACAGATAGTGTTCCTACAAAACTCTTAGAGCCTCCAGTAGAAACACAAAAACGTGTTGTTCAGACTTGGTGTCAAACTAGGCCATCTCTAAATGCCATTGAGATTATGATGAGCTCTCGTGTTAAAAAGAAGATTATGAAAGATGAAAAGACAAGTAATGGTGGCGATCATCTTCCACTGCTAGAGGAGGCAGAATCTTTAGAAGGAACATCTGTGGCAAACTCTGAAGAGGAAGAAGCTTGCTTCAGTGGAGCACTAAATCGTAGTACATCTGCTACTGGGGCAGAAAGTAGGATGGACGAATCCATTTCTAACAGTGTGAAGCCCTCCGAGAGAGATGGTGTTGTGGGGGATGGAGTTTCTCAAGATCAATTGTTTACATGGAAAGAAGAATTAGAATGCCTTGTTCGTGGGGGGTTGCCAAAAGATCTGAGGGGAGAGGTGTGGCAAGCCTTTGTAGGTGTAAAGACCCGTCGAATTGAGAAATATTACCAGGATTTGTTGGACCAAGAAACTAATTGTAGTGCAGATAATGAGAACAATATCCCATCTGGTGTACCGATAAAATTGAGAAAACAGATTGAGAAGGATATACCACGGACATTTCCTGGTCATCCTGCCCTGGATGAGAATGGTAGAGACTCCTTAAGGCGTTTACTTTTAGCATATGCTCTTCACAATCCCTCTGTTGGTTACTGTCAGGCAATGAATTTCTTTGCGGGCTTGTTACTACTCCTGATGCCCGAGGAGAATGCCTTTTGGACTTTGGTTGGAATAATAGATGACTATTTTGATGGATATTACACTGAGGAAATGATAGAATCGCAGGTGGACCAGCTTGTTTTTGAGGAATTGATGCGTGAAAGATTTCCTAAATTGGTTAAACATTTGGATTACTTGGGAGTGCAAGTGGCATGGATCACAGGACCTTGGTTCCTTTCCATTTTTGTAAATATGCTTCCGTGGGAGAGTGTACTCCGAGTTTGGGATGTGCTTCTGTTTGAAGGCAACAGAGTCATGCTGTTCCGGACAGCACTTGCATTGATGGAACTATATGGTCCTGCATTAGTTACTACGAAAGATGCGGGGGACGCCATAACTCTGTTACAATCCCTTGCTGGTTCCACATTTGATAGTAGCCAGCTTGTGTTGACTGCTTGCATGGGTTTTCTGACTGTAACTGAAGTAAGACTAGTAGAGTTGAGAGAAAAGCTCCGACCATCTGTGCTAGCTGTACTTGAAGAAAGAACAAAGAAGGGTCGGGTTTGGAAGGATTCCAAAGGGCTAGCTTCCAAGCTTTATAGTTTCAAGCATGATCCCGGATCACCTATGGAGAGGAAAAAGACAGCTGCAGGAGCCGATGTAGGATCCTGTACCCCTAATCTGGATGACTTCCTTAGTGGATTAGCCGGTGATTCAGAAACAGAATCACTCCCAGACCTTCAAGAACAAGTAGTATGGTTGAAGGTTGAGTTGTGCAGGTTGCTGGAGGAAAAAAGATCTGCGGTTCTAAGAGCCGAGGAGCTAGAAACAGCACTTATGGAAATGGTCACCCAAGATAATCGACGACTATTAAGTGCCAGGGTTGAACAACTGGAGATAGAGGTAGCCGAGCTAAAGAAAACTCTAGCAGAGAAGAAAGAACAAGAAGTTGCAATGCTTCAGTTGTTGATGCGTGTTGAGCAAGAGCAAAGAGTAACCGAGGAAGCTAGAATAAATGCCGAGCAAGACGTAGCAGCTCAAAAATATGCTGTTCATATGCTTCAGGATAAATATGAGAAAGCTATGGCTTCACTTGCTGAGATGGAGAAAAGGGTGGTGATGGCCGAATCCATGTTGGAGGCTACATTACAATATGAATCTGGCCAAGTTAAAGCAATGTCATCTCCTGGGTCGCGTAATCAAGGATCTGCACAGGAAAATCAAAGAAAGGTTGGTTTGCTGCCATTTGCACTAGGCTGGCGAGATCGAAACAAGCTTGAATTTCTATTCTCGAATTGGGTCGACTGGCGTAGCTTAGAGGATCTTTCTTTTAGTTTTCTTCACATTAACAGAATGGAAAGGCTTTTTCTTTGGGTGAAGAACCTTAATTTCAGAGTGAAGTTCCAACAGCTAAGTGACCCGTTCAGGCACCGTCCAGTGCATTCAATCAAGCTTTTGAATCACCTATGGTACTCCTCCTCGTAG | 4251 | 43.52 | MAALVEEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLVPLNLYNRPDWYKEKVYPINKVPSLEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPAKREYAEELLSYSDTFNIAVASSFKGDTAKEAGAQFDYLENALQKFDGPFFLGEISQVDIAYIPFVERFQVFLLEALKIDITEGRPKLAAWIEELNKIDAYKQTKADPKLIVEAYTKRFLVEEMIRINYPTCGREFFDVCSVLSMYFGVFEAISLYVAARVRFLRFPIHTSLNEAAIYLIRRTSMASPYVEEIPPPSLDATAEQPPLFDGTTRLYTAYICPYAHRVWIIRNYKGLQHKIKLVPLNLINRPDWYKEKVYPMNKVPSLEHNGKVIGESLDLLKYIDSNFEGPSLLPDPAKREYAEELLSYGETFNGAIIDSFKGDTAKEAGAQFDYLENALGKFDGPFLLGEISQVDIAYIPFVERFHIFLLEALKIDITEGRPKLLAWIEEFNKIDAYKQTKVDPKLVVEIYSMRFLGTVERYQNPPHHNASPDGRCNAVHFHLRAMKIFRALEREREKERPKKPIYLLHPLMAERSIHMLHILEPRRDAYGFALRPQHTHRYREHANIYKEEEEERCDKWKNFLDQVATSFQVCPLEEANTNTLQAETSEHQEETVSGRSSTGDDSTGSNSDSVDTTDSVPTKLLEPPVETQKRVVQTWCQTRPSLNAIEIMMSSRVKKKIMKDEKTSNGGDHLPLLEEAESLEGTSVANSEEEEACFSGALNRSTSATGAESRMDESISNSVKPSERDGVVGDGVSQDQLFTWKEELECLVRGGLPKDLRGEVWQAFVGVKTRRIEKYYQDLLDQETNCSADNENNIPSGVPIKLRKQIEKDIPRTFPGHPALDENGRDSLRRLLLAYALHNPSVGYCQAMNFFAGLLLLLMPEENAFWTLVGIIDDYFDGYYTEEMIESQVDQLVFEELMRERFPKLVKHLDYLGVQVAWITGPWFLSIFVNMLPWESVLRVWDVLLFEGNRVMLFRTALALMELYGPALVTTKDAGDAITLLQSLAGSTFDSSQLVLTACMGFLTVTEVRLVELREKLRPSVLAVLEERTKKGRVWKDSKGLASKLYSFKHDPGSPMERKKTAAGADVGSCTPNLDDFLSGLAGDSETESLPDLQEQVVWLKVELCRLLEEKRSAVLRAEELETALMEMVTQDNRRLLSARVEQLEIEVAELKKTLAEKKEQEVAMLQLLMRVEQEQRVTEEARINAEQDVAAQKYAVHMLQDKYEKAMASLAEMEKRVVMAESMLEATLQYESGQVKAMSSPGSRNQGSAQENQRKVGLLPFALGWRDRNKLEFLFSNWVDWRSLEDLSFSFLHINRMERLFLWVKNLNFRVKFQQLSDPFRHRPVHSIKLLNHLWYSSS | 1416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 36333897 | 36354870 | - | CrPI670011_10g021800.1 | Cre10g2180 | 511482 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g2180 | 1416 | SUPERFAMILY | Thioredoxin-like | 20 | 107 | IPR036249 | - | |
Cre10g2180 | 1416 | Gene3D | - | 401 | 530 | - | - | |
Cre10g2180 | 1416 | Gene3D | - | 104 | 235 | - | - | |
Cre10g2180 | 1416 | Pfam | Glutathione S-transferase, N-terminal domain | 29 | 105 | IPR004045 | - | |
Cre10g2180 | 1416 | Pfam | Glutathione S-transferase, N-terminal domain | 326 | 402 | IPR004045 | - | |
Cre10g2180 | 1416 | Gene3D | - | 955 | 1094 | - | - | |
Cre10g2180 | 1416 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 25 | 106 | IPR004045 | - | |
Cre10g2180 | 1416 | SUPERFAMILY | GST C-terminal domain-like | 400 | 527 | IPR036282 | - | |
Cre10g2180 | 1416 | Coils | Coil | 1210 | 1265 | - | - | |
Cre10g2180 | 1416 | CDD | GST_C_Lambda | 111 | 227 | - | - | |
Cre10g2180 | 1416 | MobiDBLite | consensus disorder prediction | 772 | 792 | - | - | |
Cre10g2180 | 1416 | FunFam | Lambda class glutathione S-transferase | 104 | 234 | - | - | |
Cre10g2180 | 1416 | SUPERFAMILY | Thioredoxin-like | 317 | 404 | IPR036249 | - | |
Cre10g2180 | 1416 | MobiDBLite | consensus disorder prediction | 762 | 806 | - | - | |
Cre10g2180 | 1416 | SMART | tbc_4 | 824 | 1048 | IPR000195 | - | |
Cre10g2180 | 1416 | SFLD | Glutathione Transferase (cytosolic) | 28 | 208 | IPR040079 | - | |
Cre10g2180 | 1416 | SFLD | Glutathione Transferase (cytosolic) | 325 | 503 | IPR040079 | - | |
Cre10g2180 | 1416 | FunFam | TBC1 domain family member 8B | 955 | 1095 | - | - | |
Cre10g2180 | 1416 | FunFam | Glutathione S-transferase L2, chloroplastic | 297 | 400 | - | - | |
Cre10g2180 | 1416 | SFLD | Main (cytGST) | 28 | 208 | - | - | |
Cre10g2180 | 1416 | Gene3D | Glutaredoxin | 297 | 400 | - | - | |
Cre10g2180 | 1416 | Gene3D | Glutaredoxin | 1 | 103 | - | - | |
Cre10g2180 | 1416 | MobiDBLite | consensus disorder prediction | 671 | 692 | - | - | |
Cre10g2180 | 1416 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 961 | 1076 | IPR035969 | - | |
Cre10g2180 | 1416 | FunFam | Ypt/Rab-GAP domain of gyp1p superfamily protein | 856 | 954 | - | - | |
Cre10g2180 | 1416 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 812 | 984 | IPR035969 | - | |
Cre10g2180 | 1416 | SUPERFAMILY | GST C-terminal domain-like | 102 | 231 | IPR036282 | - | |
Cre10g2180 | 1416 | Gene3D | putative rabgap domain of human tbc1 domain family member 14 like domains | 844 | 954 | - | - | |
Cre10g2180 | 1416 | Pfam | Rab-GTPase-TBC domain | 831 | 1042 | IPR000195 | - | |
Cre10g2180 | 1416 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 2 | 241 | IPR044629 | GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER) | |
Cre10g2180 | 1416 | MobiDBLite | consensus disorder prediction | 655 | 702 | - | - | |
Cre10g2180 | 1416 | FunFam | Glutathione S-transferase L2, chloroplastic | 1 | 103 | - | - | |
Cre10g2180 | 1416 | Coils | Coil | 1273 | 1300 | - | - | |
Cre10g2180 | 1416 | Pfam | Glutathione S-transferase, C-terminal domain | 146 | 205 | - | - | |
Cre10g2180 | 1416 | Pfam | Glutathione S-transferase, C-terminal domain | 442 | 501 | - | - | |
Cre10g2180 | 1416 | ProSiteProfiles | TBC/rab GAP domain profile. | 827 | 1024 | IPR000195 | - | |
Cre10g2180 | 1416 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 322 | 403 | IPR004045 | - | |
Cre10g2180 | 1416 | CDD | GST_C_Lambda | 407 | 523 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre10g2180 | Cre-Chr10:36333897 | Cre10g2181 | Cre-Chr10:36357397 | 5.80E-19 | tandem | |
Cre02g1284 | Cre-Chr2:14384893 | Cre10g2180 | Cre-Chr10:36333897 | 8.00E-43 | transposed | |
Cre02g1691 | Cre-Chr2:29945165 | Cre10g2180 | Cre-Chr10:36333897 | 1.50E-224 | transposed | |
Cre10g2180 | Cre-Chr10:36333897 | Cre02g1689 | Cre-Chr2:29929566 | 5.30E-89 | wgd | |
Cre10g2180 | Cre-Chr10:36333897 | Cre04g0990 | Cre-Chr4:28480229 | 4.40E-27 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g2180 | - | - | - | 0.0 |