Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2181 ATGGCTACTCCAACTGTCGTATCGGAAGTTCGTCCGCCGTCATTGGAAGCCGACGCCGAACAACCTCCCCTCTTCGACGGAACCACCAGGTTGTATATGGCTTACTATTGCCCATTCGCACAACGTGCTTGGATTACAAGAAATTACAAGGGATTAGAGGATAAAATTAAATTAGTGCCTCTAAACCTTCAAAACAGGCCTGCTTGGTATAAGGAAAAAGTCTACCCAACAAACAAGGTGCCAGCATTGGAACACAGTGGAAAAGTTATTGGAGAAAGCCTTGATTTGATCAGATACATAGATAGCAACTTTGAAGGGCCTTCTCTTCTTTCAGATGATCCTGTTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACCGATACGTTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCTAAGGAAGCAGGTCCTCAATTTGATTACTTGGAGAATGCTCTTCAGAAATTTGATGATGGCCCATTCTTTTTGGGTCAATTCAGTGGGGTGGATATTGCATACATCACATTTATTGAAAGATTCCATGTGTTCTTAAATGAAGTTTTCAAATATGATATCATAGAAGGAAGACCTAATCTAGCTGCATGGATTGAGGAGTTCAATAAGATTGATGCTTACAAGCAAACAAAATATGATCCTAAAGCGATTGTTGAACTTTACAAGAAGCGCTTCATGGTGGATATAGCATACATTCCATTTGTTGAAAGATATCACATTTTCTTATTTGAGGTTTTCAAGATTGACATCACTCAAACAAGGCTTAGATTAACTGTATGGATTGAGGAGTTCAACAAGATTAATACTTACAAGCAAACAAAATATGATCCTAAAGCTATTGTTGAATATTACACAAAGCGCTTTCTGGTACCATATGCTACTTAA 912 38.71 MATPTVVSEVRPPSLEADAEQPPLFDGTTRLYMAYYCPFAQRAWITRNYKGLEDKIKLVPLNLQNRPAWYKEKVYPTNKVPALEHSGKVIGESLDLIRYIDSNFEGPSLLSDDPVKRQFGEELLAYTDTFTGAVYPSFKGDPAKEAGPQFDYLENALQKFDDGPFFLGQFSGVDIAYITFIERFHVFLNEVFKYDIIEGRPNLAAWIEEFNKIDAYKQTKYDPKAIVELYKKRFMVDIAYIPFVERYHIFLFEVFKIDITQTRLRLTVWIEEFNKINTYKQTKYDPKAIVEYYTKRFLVPYAT 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36357397 36362714 - CrPI670011_10g021810.1 Cre10g2181 511483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2181 303 FunFam Glutathione S-transferase L2, chloroplastic 2 105 - -
Cre10g2181 303 CDD GST_C_Lambda 113 231 - -
Cre10g2181 303 Pfam Glutathione S-transferase, C-terminal domain 150 208 - -
Cre10g2181 303 SUPERFAMILY GST C-terminal domain-like 235 297 IPR036282 -
Cre10g2181 303 Gene3D - 236 299 - -
Cre10g2181 303 FunFam Lambda class glutathione S-transferase 106 236 - -
Cre10g2181 303 SUPERFAMILY GST C-terminal domain-like 104 234 IPR036282 -
Cre10g2181 303 Gene3D Glutaredoxin 2 105 - -
Cre10g2181 303 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Cre10g2181 303 SUPERFAMILY Thioredoxin-like 21 109 IPR036249 -
Cre10g2181 303 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
Cre10g2181 303 SFLD Main (cytGST) 30 210 - -
Cre10g2181 303 Gene3D - 106 235 - -
Cre10g2181 303 SFLD Glutathione Transferase (cytosolic) 30 210 IPR040079 -
Cre10g2181 303 PANTHER GLUTATHIONE S-TRANSFERASE L1 235 299 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1689 Cre-Chr2:29929566 Cre10g2181 Cre-Chr10:36357397 8.30E-85 dispersed
Cre10g2180 Cre-Chr10:36333897 Cre10g2181 Cre-Chr10:36357397 5.80E-19 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2181 K00799 - csv:101210004 448.358