Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g2181 | ATGGCTACTCCAACTGTCGTATCGGAAGTTCGTCCGCCGTCATTGGAAGCCGACGCCGAACAACCTCCCCTCTTCGACGGAACCACCAGGTTGTATATGGCTTACTATTGCCCATTCGCACAACGTGCTTGGATTACAAGAAATTACAAGGGATTAGAGGATAAAATTAAATTAGTGCCTCTAAACCTTCAAAACAGGCCTGCTTGGTATAAGGAAAAAGTCTACCCAACAAACAAGGTGCCAGCATTGGAACACAGTGGAAAAGTTATTGGAGAAAGCCTTGATTTGATCAGATACATAGATAGCAACTTTGAAGGGCCTTCTCTTCTTTCAGATGATCCTGTTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACCGATACGTTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCTAAGGAAGCAGGTCCTCAATTTGATTACTTGGAGAATGCTCTTCAGAAATTTGATGATGGCCCATTCTTTTTGGGTCAATTCAGTGGGGTGGATATTGCATACATCACATTTATTGAAAGATTCCATGTGTTCTTAAATGAAGTTTTCAAATATGATATCATAGAAGGAAGACCTAATCTAGCTGCATGGATTGAGGAGTTCAATAAGATTGATGCTTACAAGCAAACAAAATATGATCCTAAAGCGATTGTTGAACTTTACAAGAAGCGCTTCATGGTGGATATAGCATACATTCCATTTGTTGAAAGATATCACATTTTCTTATTTGAGGTTTTCAAGATTGACATCACTCAAACAAGGCTTAGATTAACTGTATGGATTGAGGAGTTCAACAAGATTAATACTTACAAGCAAACAAAATATGATCCTAAAGCTATTGTTGAATATTACACAAAGCGCTTTCTGGTACCATATGCTACTTAA | 912 | 38.71 | MATPTVVSEVRPPSLEADAEQPPLFDGTTRLYMAYYCPFAQRAWITRNYKGLEDKIKLVPLNLQNRPAWYKEKVYPTNKVPALEHSGKVIGESLDLIRYIDSNFEGPSLLSDDPVKRQFGEELLAYTDTFTGAVYPSFKGDPAKEAGPQFDYLENALQKFDDGPFFLGQFSGVDIAYITFIERFHVFLNEVFKYDIIEGRPNLAAWIEEFNKIDAYKQTKYDPKAIVELYKKRFMVDIAYIPFVERYHIFLFEVFKIDITQTRLRLTVWIEEFNKINTYKQTKYDPKAIVEYYTKRFLVPYAT | 303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 36357397 | 36362714 | - | CrPI670011_10g021810.1 | Cre10g2181 | 511483 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g2181 | 303 | FunFam | Glutathione S-transferase L2, chloroplastic | 2 | 105 | - | - | |
Cre10g2181 | 303 | CDD | GST_C_Lambda | 113 | 231 | - | - | |
Cre10g2181 | 303 | Pfam | Glutathione S-transferase, C-terminal domain | 150 | 208 | - | - | |
Cre10g2181 | 303 | SUPERFAMILY | GST C-terminal domain-like | 235 | 297 | IPR036282 | - | |
Cre10g2181 | 303 | Gene3D | - | 236 | 299 | - | - | |
Cre10g2181 | 303 | FunFam | Lambda class glutathione S-transferase | 106 | 236 | - | - | |
Cre10g2181 | 303 | SUPERFAMILY | GST C-terminal domain-like | 104 | 234 | IPR036282 | - | |
Cre10g2181 | 303 | Gene3D | Glutaredoxin | 2 | 105 | - | - | |
Cre10g2181 | 303 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 27 | 108 | IPR004045 | - | |
Cre10g2181 | 303 | SUPERFAMILY | Thioredoxin-like | 21 | 109 | IPR036249 | - | |
Cre10g2181 | 303 | Pfam | Glutathione S-transferase, N-terminal domain | 31 | 107 | IPR004045 | - | |
Cre10g2181 | 303 | SFLD | Main (cytGST) | 30 | 210 | - | - | |
Cre10g2181 | 303 | Gene3D | - | 106 | 235 | - | - | |
Cre10g2181 | 303 | SFLD | Glutathione Transferase (cytosolic) | 30 | 210 | IPR040079 | - | |
Cre10g2181 | 303 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 235 | 299 | IPR044629 | GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g1689 | Cre-Chr2:29929566 | Cre10g2181 | Cre-Chr10:36357397 | 8.30E-85 | dispersed | |
Cre10g2180 | Cre-Chr10:36333897 | Cre10g2181 | Cre-Chr10:36357397 | 5.80E-19 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g2181 | K00799 | - | csv:101210004 | 448.358 |