Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2183 ATGGCACCCAATACCAAGGTGGACATCAAATGGAGTGGCAACAAAATGGAAGGTGGTGAAGTTTTGAAAACAATGGAGTGCCTAAGAAGGAGATTACTAGCAGAGAGGCAAGCATCATTACTTGCTAAAGAGGAGGCACAGCTCATGGGGAAAAGGGCTACAATTTCATCGGAAATTTGCGATGAAGATGAACCGAAAACCCTAATCGAAGTTCCGCCACTCACAAGAAACTCGAAAGCCATTGATGAAATTTCTCATTCGGAAGAAGAGAAACGAAATTCTCGTGGTTCTACAAGCTCAAACTCCGCTGCTTCCGAAATTTGTTCCGACGAACCTTCGAAAACGAAGATCGGAAATTGCGGAAAGGAGTTCGATTCCGTCGACGATTCACTAGCAAGTGTTACCGTGAACACGACGGAAAAATCAGAAACCGGCGATCAGTTGAAGTCCGTGATCAGTGAAAGGATCATTGAAGTTCTTAATGATCTGAAGCACGCCCGAGAGAGAATTCAGAGCTCAATGAAGATTTGTGAGCTCAACATGATTAAGTTGGACAACCCCAAGAACAGGCGGGATTCCCAATTTAGGGACAAAGCTCAGTCTGTTCCTGGAAGATGGCACAGAAGCAAAGGCCAAACCCATAAATCCCAGATTCAAGAAACTCCTGTAATTTTGTGTCCAGTGACTGGCCTTTTAGAAAAAATGGTTAAACCCTGCTGGAAGCCTCATGATGATGGCGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGACAATTCTCCATGGCAGTAATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCGTTGAGTATGACCAATCCAGGTCCGCAGGGGACCTTTGTAGGAGTTTATGATGGCCATGGCGGAACCGAAGCTTCACGGTTTGTCAATGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTACACCAAGACATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGGTTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTAGGGATCATATGCAATGGACAGCTATATATTGCAAATGCAGGCGATTCACGAGTAGTGCTGGGGAGAACTGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATAGAGTCTGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCCCAGATTGTGATCCTAAAGCACAATGTTTGGCGTGTTAAAGGTCTCATACAGGTTTCAAGATCCATTGGTGATGCATATTTGAAAAAAGCAAAGTTCAATAGACCTCCTCTCCCACCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGCGCAGAACCGTCAATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGTCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCCCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCAAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGTGTGAGAAGGCATTTCCACGATGACATTTCTGTTGTAGTTGTGTTCTTAGATCCTCATTTGATCAATGGCAGGCCCTCCCCTTGTTCCATATCAATCAAAGGAGGAGAAGGTCTCCCCTCATCGGCAAACTCCTAG 1815 44.57 MAPNTKVDIKWSGNKMEGGEVLKTMECLRRRLLAERQASLLAKEEAQLMGKRATISSEICDEDEPKTLIEVPPLTRNSKAIDEISHSEEEKRNSRGSTSSNSAASEICSDEPSKTKIGNCGKEFDSVDDSLASVTVNTTEKSETGDQLKSVISERIIEVLNDLKHARERIQSSMKICELNMIKLDNPKNRRDSQFRDKAQSVPGRWHRSKGQTHKSQIQETPVILCPVTGLLEKMVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQDISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGLIQVSRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPSPCSISIKGGEGLPSSANS 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36367698 36376101 - CrPI670011_10g021830.1 Cre10g2183 511485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2183 604 MobiDBLite consensus disorder prediction 72 112 - -
Cre10g2183 604 ProSitePatterns PPM-type phosphatase domain signature. 302 310 IPR000222 GO:0043169(InterPro)
Cre10g2183 604 Gene3D - 257 583 IPR036457 -
Cre10g2183 604 Pfam Protein phosphatase 2C 298 545 IPR001932 -
Cre10g2183 604 MobiDBLite consensus disorder prediction 81 95 - -
Cre10g2183 604 SUPERFAMILY PP2C-like 267 578 IPR036457 -
Cre10g2183 604 CDD PP2Cc 266 576 IPR001932 -
Cre10g2183 604 PANTHER PROTEIN PHOSPHATASE 245 575 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre10g2183 604 FunFam Phosphatase 2C family protein 257 585 - -
Cre10g2183 604 ProSiteProfiles PPM-type phosphatase domain profile. 268 576 IPR001932 -
Cre10g2183 604 SMART PP2C_4 246 574 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1677 Cre-Chr4:35085522 Cre10g2183 Cre-Chr10:36367698 1.90E-140 dispersed
Cre10g0310 Cre-Chr10:1963380 Cre10g2183 Cre-Chr10:36367698 2.50E-137 dispersed
Cre10g0436 Cre-Chr10:3246203 Cre10g2183 Cre-Chr10:36367698 2.00E-27 dispersed
Cre10g1870 Cre-Chr10:33280439 Cre10g2183 Cre-Chr10:36367698 7.00E-116 dispersed
Cre10g2183 Cre-Chr10:36367698 Cre11g1291 Cre-Chr11:11882183 4.80E-23 dispersed
Cre10g2183 Cre-Chr10:36367698 Cre02g1688 Cre-Chr2:29922927 1.70E-148 wgd
Cre10g2183 Cre-Chr10:36367698 Cre04g0961 Cre-Chr4:28250973 9.40E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2183 K01102 - csv:101210750 737.643