Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2241 ATGGCCCAACTCTGTTTTCTCTGTTTCTTCTTCTTCCTCTGCGTCGCCGGCCCCGCCGCATCTCAGCAGCTCTACTTCGCTGGATTTCATGACGCCGCCGCCGCCGCCAACTTAACCCTCACTGACATCGCCAAGATCGAGCAGAACGGAATCTTAAAGCTCACAAATGACACCAGTCGATTACAGGGTCATGCCTTTTACAGTTCCCCTGTTCGCTTCAAAAACTCTTCCGACGGCAAAGCTTTTTCCTTCTCCACCGCTTTTGTCATCGCCGTCGTCCCCGAATACCCGACTCTAGGCGGCCATGGACTCGCCTTCACCATTGCCCATTCGAAGAACCTCCGTGGACTTCCCAGTCAGTATTTAGGCCTTCTCAATGCGACCGACGTCGGAAACTTCACGAACCATCTCTTCGCCGTCGAGTTCGACACCGTTCAAGATTTTGAGTTCGGCGACATCAACGACAACCACGTCGGAATCAATCTCAACAATATGGTTTCTAATGCCTCCACCACCGCTTCCTATTTCGTCGACGATGGACCCACCAAGCAGAATCTAACCCTAAAAAGTGGGAGGCCGATTCAAGCTTGGATCGATTACGATTCCTCTGTAAATTCACTCACGGTTGCGCTTTCTCCGTTTTCAACCAAACCCAAGAAGCCGATTCTGTCGTTTAATGTAGATCTCTCTCCGATTCTTCAGGAGTCTATGTACGTTGGGTTCTCGGCCTCAACTGGGCTTCTTGCAAGTTCGCACTATGTGTTGGGATGGAGTTTCAGTATGAATGGACCAGCTGAGTCTCTGGATCTGTCTTCTTTGCCTTCTGTTCCAGGTCCGAAGAAGAAGCACACTGGTTTTACAATTGGGGTTTCTGTTGCGGCCGTTTTGATTGTGGTAATCGCGATTTGTGTTGCTGTTTTAATCATTTGGAAGATAAAAAACGCTGATATAATCGAGGCCTGGGAGCACGAAATCGGCCCTCATCGGTACTCTTACAAGGAGCTCAAGCAAGCGACTAAGCGATTTAGGGATAAAGAGCTCTTAGGGCGTGGTGGGTTTGGGAAAGTTTACAAAGGGACTTTGCCGAATTCGAAAACCCAAGTGGCTGTGAAGCGGATTTCTCACGAATCGAAACAGGGCCTAAGGGAATTTGTGTCGGAAATCGCTAGCATTGGCCGGCTTCGTCACCGGAACTTGGTTCAGTTGCTGGGATGGTGTCGCCGCCGTGGCGATCTGCTTCTGGTTTATGATTTCATGGCTAATGGGAGCTTGGATAACTACATTTTCGACGACCCGGATGTGAATCTGAGTTGGGAACAAAGGTTCAGAATCATTAAGGGCGTCGCCTCCGGTTTGCTCTACTTGCACGAAGGCTACGAGCAGGTGGTGATTCATAGAGATGTGAAGGCCAGTAATGTCCTGCTCGATGGCGAGATGAATGGGAAGCTCGGCGATTTCGGCCTGGCTCGACTATACGAACACGGGGCAAACCCGAGCACGACTCGGGTCGTCGGCACTCTGGGATATCTGGCGCCGGAGTTACCCAGAACAGGGAAGGCCACCACCAGCTCAGATGTGTATGCCTTCGGCGCACTTCTGCTAGAAGTGGCTTGCGGACGGCGGCCGATCGACCCGAAATCTTCGTCGGAAGAGCTAGTGCTGGTGGATTGGGTGTGGGAGAATTACAGGGAAGGGAAATTGCTGGAAGTAATGGATCCAAAATTGAAAGGGGATTTCAATGTAGCTGAGGCAGTGATGATTTTGAAGCTGGGGTTGTTCTGTTCGAACGATTCGGCGGCGGCCCGGCCTACTATGAGGCAGGTGGTGAGGTTTCTGGAGGGGGAGATTGGAGTTCCTGAGGAGATATCAGCGCCGAAAGTGGTGGAAGGAGGGAGGAATGGTGAAGGGTTCGATGATTTTGTGAATTCATTTGCATCTTCTTCCTTTAACAAGGGTAATTTTTACAGACGATGA 1974 50.76 MAQLCFLCFFFFLCVAGPAASQQLYFAGFHDAAAAANLTLTDIAKIEQNGILKLTNDTSRLQGHAFYSSPVRFKNSSDGKAFSFSTAFVIAVVPEYPTLGGHGLAFTIAHSKNLRGLPSQYLGLLNATDVGNFTNHLFAVEFDTVQDFEFGDINDNHVGINLNNMVSNASTTASYFVDDGPTKQNLTLKSGRPIQAWIDYDSSVNSLTVALSPFSTKPKKPILSFNVDLSPILQESMYVGFSASTGLLASSHYVLGWSFSMNGPAESLDLSSLPSVPGPKKKHTGFTIGVSVAAVLIVVIAICVAVLIIWKIKNADIIEAWEHEIGPHRYSYKELKQATKRFRDKELLGRGGFGKVYKGTLPNSKTQVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDNYIFDDPDVNLSWEQRFRIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDGEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSSDVYAFGALLLEVACGRRPIDPKSSSEELVLVDWVWENYREGKLLEVMDPKLKGDFNVAEAVMILKLGLFCSNDSAAARPTMRQVVRFLEGEIGVPEEISAPKVVEGGRNGEGFDDFVNSFASSSFNKGNFYRR 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36800090 36802423 - CrPI670011_10g022410.1 Cre10g2241 511543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2241 657 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
Cre10g2241 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g2241 657 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Cre10g2241 657 SUPERFAMILY Protein kinase-like (PK-like) 323 624 IPR011009 -
Cre10g2241 657 Gene3D - 21 262 - -
Cre10g2241 657 Gene3D Transferase(Phosphotransferase) domain 1 419 627 - -
Cre10g2241 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 281 IPR013320 -
Cre10g2241 657 CDD lectin_legume_LecRK_Arcelin_ConA 26 263 IPR001220 GO:0030246(InterPro)
Cre10g2241 657 Pfam Protein kinase domain 343 550 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g2241 657 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524(InterPro)
Cre10g2241 657 ProSiteProfiles Protein kinase domain profile. 342 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g2241 657 SMART serkin_6 342 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g2241 657 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Cre10g2241 657 PANTHER - 39 619 IPR050528 GO:0005886(PANTHER)
Cre10g2241 657 FunFam L-type lectin-domain containing receptor kinase S.4 20 267 - -
Cre10g2241 657 Pfam Legume lectin domain 22 273 IPR001220 GO:0030246(InterPro)
Cre10g2241 657 CDD STKc_IRAK 348 614 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0897 Cre-Chr4:27646271 Cre10g2241 Cre-Chr10:36800090 1.40E-188 dispersed
Cre06g2596 Cre-Chr6:33658888 Cre10g2241 Cre-Chr10:36800090 5.20E-140 dispersed
Cre07g0641 Cre-Chr7:4204046 Cre10g2241 Cre-Chr10:36800090 1.30E-125 dispersed
Cre10g1875 Cre-Chr10:33320536 Cre10g2241 Cre-Chr10:36800090 4.40E-102 dispersed
Cre10g2241 Cre-Chr10:36800090 Cre10g2340 Cre-Chr10:37577691 2.10E-152 dispersed
Cre01g0799 Cre-Chr1:8875012 Cre10g2241 Cre-Chr10:36800090 1.60E-96 transposed
Cre02g0651 Cre-Chr2:3447582 Cre10g2241 Cre-Chr10:36800090 3.60E-99 transposed
Cre08g0615 Cre-Chr8:19077930 Cre10g2241 Cre-Chr10:36800090 8.40E-96 transposed
Cre10g0673 Cre-Chr10:6374958 Cre10g2241 Cre-Chr10:36800090 9.20E-116 transposed
Cre10g0919 Cre-Chr10:10742888 Cre10g2241 Cre-Chr10:36800090 2.30E-109 transposed
Cre10g2156 Cre-Chr10:36108561 Cre10g2241 Cre-Chr10:36800090 7.40E-111 transposed
Cre10g2241 Cre-Chr10:36800090 Cre04g0895 Cre-Chr4:27621717 4.20E-214 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64498 PF00069 Pkinase 5.50E-46 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2241 - - - 0.0