Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2282 ATGCTTCAGATCCGGCTTAGCAAAGTTCCACAGGCCGAAGGTGGTGGTGGGGCAGTGAAGCCCTTGCCGGCGGAGACTGTGACGGTCGCATGCCCCGACCACCTCGTTCTTGCTAATCTTCCTGTAGCTAAGGGCATTGGTGCGGCTACTGCTGCTTCCGTTGTCAAGTCGGTCGGTCGCAGGTCTCGCCGTCAGCTTGGAGAACGAGTTCATTTTTGTGTCAGATGCGATTTTCCTATTGCAATATATGGTCGCCTGAGTCCTTGTGAGCATGCCTTCTGTCTTGATTGTGCAAGGAGCGATTCTTTATGCTACCTTTGTGATGACCGTATCCAGAAGATTCAAACCATAAAATTGATGGAGGGGATCTTCATTTGTGCAGCCCCACACTGTCTCAAGTCTTTTCTTAAGAGGACTGAATTTGAATCTCATATACACGAGAGTCATGCTGACCTTCTTAAGCCAAATGCAGACAAGGAAGATGGAAATGAAATTGAGGCTCATAGTGCCAAACAATCTACAGCTTCTGAATCCACAGTACGAGGTCCATCGAGACCACTCATATCTCCGGGGTCCAATTCCCAGCCTCAAGAACGTGAAGAGAAGTTTCATCGTCAACAATCTAGAGACCAACCCAGATCTGGCATGCAGCAAAAGCAAACGCCAACTTTTGGCCAGAACCAAAACAATACATCGGAGTCTCAACAAGACAGCGGTCATTCACAAGGCTTTGATCGACATATCCCTCATGGCCGTTTCCCCCCTCAAAACTTCGATGCACAGGGTGCTCCACATCAGGACTCCAGTCAGTTTTCAGAGAAACAGCAAGGAGTTCTATCTGATACTCCATATTCTCAGTATCCTCCGTTGCAACCAATTCCACCACCAAATTATGTGGTTCCAGCTAACTCTAATCCAACGCCCCCTCTACCATTTGGTTATCCCCCTTTTCCAATTGAGGGAGGAGCACAACAATATTACAGTACACCCTATGAAGTGTCACGGCAAGACTCTGCAGCAGAGACCGGATCCGAGCAAGGGTCACTGCTAGGCTTTCCACCTGGTGCAGCAGGAGGAATGAATTTCCCAGCAACGTATCCACAATCTTGGAATACTGGGCAAGCGGGCATTCCTTATGAACACGCGGCTGGGGGTCATTCAATGCCCGAAGCTTTTGCTAATACGCCTGATTCTCAAGGAAAACATGGATTTTATCAAGGAGATTATAGACGCAGCCCTGGACGTATACCTGTGAATTCTTCTGCAGGTAATGCGATGGACTTAAGGGATGGTAAAGGTATATTAGCACCACAGCCTCTAATACAATTGCCTCCGCCTCCACCGCCCCCACCCTACATGTCGCATAACAAGCGGGGTAAGTTTTATCCAGGAGATATGGATCATGATGGGCAAAGCCATGGATGGCAGAATGACAGCCATAGCCGAGATAGCTTCGGAAGCGGCCAAGACTGA 1473 48.74 MLQIRLSKVPQAEGGGGAVKPLPAETVTVACPDHLVLANLPVAKGIGAATAASVVKSVGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDDRIQKIQTIKLMEGIFICAAPHCLKSFLKRTEFESHIHESHADLLKPNADKEDGNEIEAHSAKQSTASESTVRGPSRPLISPGSNSQPQEREEKFHRQQSRDQPRSGMQQKQTPTFGQNQNNTSESQQDSGHSQGFDRHIPHGRFPPQNFDAQGAPHQDSSQFSEKQQGVLSDTPYSQYPPLQPIPPPNYVVPANSNPTPPLPFGYPPFPIEGGAQQYYSTPYEVSRQDSAAETGSEQGSLLGFPPGAAGGMNFPATYPQSWNTGQAGIPYEHAAGGHSMPEAFANTPDSQGKHGFYQGDYRRSPGRIPVNSSAGNAMDLRDGKGILAPQPLIQLPPPPPPPPYMSHNKRGKFYPGDMDHDGQSHGWQNDSHSRDSFGSGQD 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 37092142 37094510 + CrPI670011_10g022820.1 Cre10g2282 511584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2282 490 MobiDBLite consensus disorder prediction 439 454 - -
Cre10g2282 490 MobiDBLite consensus disorder prediction 210 242 - -
Cre10g2282 490 CDD RING-HC_HAKAI-like 71 120 IPR040380 -
Cre10g2282 490 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 150 IPR013087 -
Cre10g2282 490 MobiDBLite consensus disorder prediction 460 476 - -
Cre10g2282 490 MobiDBLite consensus disorder prediction 168 196 - -
Cre10g2282 490 ProSitePatterns Zinc finger C2H2 type domain signature. 126 149 IPR013087 -
Cre10g2282 490 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 124 IPR013083 -
Cre10g2282 490 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 465 IPR040383 GO:0016567(PANTHER)|GO:0016567(InterPro)|GO:0030155(PANTHER)|GO:0061630(InterPro)|GO:0061630(PANTHER)
Cre10g2282 490 MobiDBLite consensus disorder prediction 407 490 - -
Cre10g2282 490 MobiDBLite consensus disorder prediction 152 167 - -
Cre10g2282 490 ProSitePatterns Zinc finger RING-type signature. 89 98 IPR017907 -
Cre10g2282 490 MobiDBLite consensus disorder prediction 287 304 - -
Cre10g2282 490 MobiDBLite consensus disorder prediction 261 286 - -
Cre10g2282 490 MobiDBLite consensus disorder prediction 152 304 - -
Cre10g2282 490 FunFam E3 ubiquitin-protein ligase Hakai 70 124 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2282 K15685 - csv:101220422 843.188