Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g2308 | ATGGCCGCCACCGCATCCTCCTTCATTGGAACTCGTCTTCCTATTGCCCCATCCGGGTCGGGTCGGGTACACGCCAGATTCTCATTCGGCAGACCAAAAAGCGCACCGAAGAAATCGTCAAAAAAGCCCACTTCGGACCGGCCGCTGTGGTACCCGGGGGCCGTGGCGCCGGAGTGGCTGGACGGAAGCTTGGTGGGGGATTACGGGTTCGACCCGTTTGGGCTGGGAAAACCGGCGGAGTACTTGCAGTTCAATTTGGACTCATTGGACCAGAACTTGGCTAAGAATGTGGCTGGTGATGTGATCGGTACTCGGTTCGAGAATGCGGATGTGAAATCGACGCCGTTCCAGCCGTACAGTGAGGTGTTTGGGTTGCAGAGGTTTCGCGAGTGTGAGCTGATCCATGGAAGGTGGGCTATGTTGGCTACACTCGGTGCCCTTACTGTTGAGTGGCTCACTGGTGTCACTTGGCAAGATGCCGGAAAGGTAGAGCTGGTGGAAGGATCCTCATATCTTGGGCAGCCACTTCCATTCTCCATATCAACATTGATATGGATAGAGGTTCTAGTAATTGGGTACATTGAGTTTCAAAGGAATGCTGAGCTTGATCCAGAGAAGAGACTTTACCCAGGGGGCAAGTACTTTGATCCCCTTGGCTTAGCGGCCGACCCCGAGAAGAAGGCGACGCTTCAATTGGCCGAGATTAAGCACGCTCGCCTCGCCATGGTCGCGTTCCTCGGTTTTGCTGTTCAAGCTGCTGCCACTGGCAAAGGCCCCCTCAATAACTGGGCAACCCATCTGATCTTCAATTGTTCCGACGCCGTTAAGGAAGAATTCCTCAGGCATTTGGCTCCTCACCGGAAGCTTGCGGTTCCTGTCTATTGTGTACTATCAATTTCTAGTTCCTGA | 909 | 53.8 | MAATASSFIGTRLPIAPSGSGRVHARFSFGRPKSAPKKSSKKPTSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFNLDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLIFNCSDAVKEEFLRHLAPHRKLAVPVYCVLSISSS | 302 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 37320106 | 37323169 | - | CrPI670011_10g023080.1 | Cre10g2308 | 511610 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g2308 | 302 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 102 | 281 | - | - | |
Cre10g2308 | 302 | MobiDBLite | consensus disorder prediction | 20 | 49 | - | - | |
Cre10g2308 | 302 | SUPERFAMILY | Chlorophyll a-b binding protein | 43 | 267 | - | - | |
Cre10g2308 | 302 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 3 | 267 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) | |
Cre10g2308 | 302 | Gene3D | Chlorophyll a/b binding protein domain | 50 | 287 | - | - | |
Cre10g2308 | 302 | Pfam | Chlorophyll A-B binding protein | 56 | 252 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g0814 | Cre-Chr4:26817728 | Cre10g2308 | Cre-Chr10:37320106 | 1.10E-134 | dispersed | |
Cre10g2308 | Cre-Chr10:37320106 | Cre11g1792 | Cre-Chr11:29505023 | 1.50E-28 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g2308 | K08915 | - | rcu:8267514 | 482.641 |