Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g2310 | ATGTTGCAGCAGAACATGGATTTTGAACAAGGAACGTCGATCTTGCAAAACGGCGTCGTCAAGGGTTCGCTGAAGCACGCTCGAACGGCTCACAACATGTCGTCGTCATCGCTTCGTAAAAAGTCCGATTTGACCCTCGTCTCCAAGGTTCGTTTGGGTTGCCTCAGGCAGTTGCTTGTGAATCTTCAGGAGGTCGTTTTTGGAACCAGGATTTGGATTCTTTTTCCGGCGGTGCCGTTGGCTGTTTTGGCCGACTCTTTCGGCTTCGCAAGACCATGGGTTTTCGTTCTTAGCTTGCTGGGCCTTGCTCCACTCGCTGAACGCCTTAGCTTTCTGACCGAACAAATCTCACACTTCACCGGCCATACAGTTGGTGGGTTGCTAAATGCGACATGTGGGAATGCGACGGAGCTAATCGTAGCAGTTTTTGCACTTAGCAAGGATAAGATTAAGTTGGTGAAGTATTCTCTTTTGGGATCCGTTCTTTCAAACCTTCTTCTTGTTCTTGGAACCTCACTCTTCCTTGGTGGCATCGTCAATCTTAACAAAGAACAAACCTATGACCGAAGGCAAGCTGAGGTGAACTCGCACATGTTGTTGTTGGCGCTTTTGTGCCATTCCCTCCCGATGTTGTTCCCTTACGCTGGAGGATCGGCTGACGTGGGGGGAGCTGGTTCCCTGCGATTGTCTAGAGCCGGTAGTATAGTAATGCTGGTGGCTTATGTCGCTTACTTGATCTTTCACCTCTGGACTCATCGCCAATTATTTGAAGCAGACAAGGAACTGGACGTATACGACGACGCAGTGGAAGAATGTCCGGTGATTGGAAAATGGAGCGCAATAGCGTGGTTGGTGGTTATTACCCTTCTCATTGCTTTGTTATCTGAGTACGTGGTCGCCACAATTGAGGATGCATCAGAAACTTGGGGCTTATCTGTTGCGTTCCTTGGCATAATCTTGCTACCACTCGTTGGAAATGCAGCTGAGCATGCAGGAGCTGTCATTTTTGCTTACAAGAACAAGTTGGATATAACTTTAGGCGTTGCTTTAGGATCTGCAACTCAAATAGCAATGTTTGTGGTTCCTTTATGTGTAATTGTTGCTTGGGTTTTGGGAATGAATATGGATCTAAATTTTAATATCCTCGAAACTGCTTCCCTTGCTCTTTCTATATTGGCTTCATCATCCATTTTACAGGATGGTACGTCTCACTACATGAAGGGATTGATTCTCCTCCTCTTCTATCTTGTCATTGCAACATGTTTCTTCCTAATTAATGGTTACTATCAACAATTTAGGGTGGTCGAGAGTCCGACTAAAGCAACAATAACCAAAATTTACAATTTGTTCGAAGGGATGAATTTGATAATTCAACCCAAAGTCGACGATTTCGGATTCAGATTTGTACGCTTTGTTCAACGTATTTGCTTCATTCCTTTGGTCTTTGGTTGGTGGTTACTCTGGCTTTCTTGCATATCTCCCTGCCTTGTAAGCCATTCAGACTCAGTTCGGTTCGGGACTATGCGGGAAGAAAAGAAGCCAGTAATTGTATGGCGGAATATCGGAAAGCTTGAAGCCTCTGATCGTCGAGTCTTCAACACCACGGACTGTGAACCACTGTGGAATAGCAACAAGCAATTTGGCACCAGTGGTGGTAGTGGTAATGATGGTGATGGAACTAGCTGTAAATTTGCCTGCATTACTGTCGTAGAAAAGCGAAACCGGAAGGAGTTCCTGCCGACGTCGGCTCAGTTGCTTAAGCATCCATTAGCAATTCTGGCTTTGGTGCACAGAGAAGCAACGCTCTTCGCCGCTGGCGCCGTATCGGGGGCGGCCGCGAAGACTGCGACAGCTCCGCTTGAGCGAATCAAGCTTCTTATGCAGACTCATGGAGCAAGAATTGCGCAAGAAGGAGCTAAGAAGTCTATTGGCTTTATCGAGGCAATAAGAACAGTAATAAAGGTGGAAGGAGTTAAAGGACTTTGGAAAGGCAACTTTCCTCAGGTTATACGTATCATACCATATAGTGCTATCCAGCTCTTTGCCTATGAAACTTTCAAGAACCTTTTCAGGGGAGAAGATGGGGAACTTTCTGTGATTGGAAGACTCGCTGCTGGTGCATGCGCTGGCATGACATCCACCTTCATGACATATCCATTAGATGTTTTGAGGTTGCGTATGGCAGTTGACCCTGGGTTTCGAACGGCATCTGAGATTGCCTTAAGTATGCTACGAGAGGAAGGCATTACATCTTACTACAGTGGTCTTGGACCATCCCTTTTTGGCATAGCTCCTTACATTGCCGTGAACTTTTGCATTTTTGACTTGGTAAAAAAGTCTTTGCCAGAGGAAGCTCAAAGGAGAACTGAAACATCTTTATTCACAGCCTTGCTTTCGGCTTCCCTAGCTACACTCATGTGCTATCCTTTGGACACTGTGAGAAGACAGATGCAAATGAAGGGTACACCTTACAATACAGTTTTCGATGCTTTTGCAGGTATATGGGCTGGTGATAGATTTGTTGGATTCTACAGGGGCTTGCTGCCCAACTTCTTGAAGAATTTACCAAGCAGCAGCATCAAGCTTACCACATATGACTTTGTCAAGCGTCTTATTGAGACTAGTGAAAATGAGTACCAGAGAATCATTGAGGAAAATCGCGAAAAGCTTAACCAAAAGTTCACTGATTAA | 2691 | 45.45 | MLQQNMDFEQGTSILQNGVVKGSLKHARTAHNMSSSSLRKKSDLTLVSKVRLGCLRQLLVNLQEVVFGTRIWILFPAVPLAVLADSFGFARPWVFVLSLLGLAPLAERLSFLTEQISHFTGHTVGGLLNATCGNATELIVAVFALSKDKIKLVKYSLLGSVLSNLLLVLGTSLFLGGIVNLNKEQTYDRRQAEVNSHMLLLALLCHSLPMLFPYAGGSADVGGAGSLRLSRAGSIVMLVAYVAYLIFHLWTHRQLFEADKELDVYDDAVEECPVIGKWSAIAWLVVITLLIALLSEYVVATIEDASETWGLSVAFLGIILLPLVGNAAEHAGAVIFAYKNKLDITLGVALGSATQIAMFVVPLCVIVAWVLGMNMDLNFNILETASLALSILASSSILQDGTSHYMKGLILLLFYLVIATCFFLINGYYQQFRVVESPTKATITKIYNLFEGMNLIIQPKVDDFGFRFVRFVQRICFIPLVFGWWLLWLSCISPCLVSHSDSVRFGTMREEKKPVIVWRNIGKLEASDRRVFNTTDCEPLWNSNKQFGTSGGSGNDGDGTSCKFACITVVEKRNRKEFLPTSAQLLKHPLAILALVHREATLFAAGAVSGAAAKTATAPLERIKLLMQTHGARIAQEGAKKSIGFIEAIRTVIKVEGVKGLWKGNFPQVIRIIPYSAIQLFAYETFKNLFRGEDGELSVIGRLAAGACAGMTSTFMTYPLDVLRLRMAVDPGFRTASEIALSMLREEGITSYYSGLGPSLFGIAPYIAVNFCIFDLVKKSLPEEAQRRTETSLFTALLSASLATLMCYPLDTVRRQMQMKGTPYNTVFDAFAGIWAGDRFVGFYRGLLPNFLKNLPSSSIKLTTYDFVKRLIETSENEYQRIIEENREKLNQKFTD | 896 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 37336169 | 37349699 | - | CrPI670011_10g023100.1 | Cre10g2310 | 511612 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g2310 | 896 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 597 | 689 | IPR018108 | - | |
Cre10g2310 | 896 | Gene3D | Mitochondrial carrier domain | 597 | 876 | IPR023395 | - | |
Cre10g2310 | 896 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 22 | 425 | IPR004713 | GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER) | |
Cre10g2310 | 896 | PRINTS | Mitochondrial carrier protein signature | 712 | 730 | IPR002067 | GO:0055085(InterPro) | |
Cre10g2310 | 896 | PRINTS | Mitochondrial carrier protein signature | 753 | 771 | IPR002067 | GO:0055085(InterPro) | |
Cre10g2310 | 896 | PRINTS | Mitochondrial carrier protein signature | 796 | 818 | IPR002067 | GO:0055085(InterPro) | |
Cre10g2310 | 896 | PRINTS | Mitochondrial carrier protein signature | 615 | 629 | IPR002067 | GO:0055085(InterPro) | |
Cre10g2310 | 896 | PRINTS | Mitochondrial carrier protein signature | 664 | 684 | IPR002067 | GO:0055085(InterPro) | |
Cre10g2310 | 896 | PRINTS | Mitochondrial carrier protein signature | 602 | 615 | IPR002067 | GO:0055085(InterPro) | |
Cre10g2310 | 896 | Coils | Coil | 865 | 892 | - | - | |
Cre10g2310 | 896 | SUPERFAMILY | Mitochondrial carrier | 601 | 868 | IPR023395 | - | |
Cre10g2310 | 896 | Gene3D | - | 268 | 424 | IPR044880 | - | |
Cre10g2310 | 896 | Gene3D | - | 120 | 259 | IPR044880 | - | |
Cre10g2310 | 896 | Pfam | Sodium/calcium exchanger protein | 280 | 422 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cre10g2310 | 896 | Pfam | Sodium/calcium exchanger protein | 93 | 249 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cre10g2310 | 896 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 787 | 871 | IPR018108 | - | |
Cre10g2310 | 896 | Pfam | Mitochondrial carrier protein | 696 | 783 | IPR018108 | - | |
Cre10g2310 | 896 | Pfam | Mitochondrial carrier protein | 792 | 874 | IPR018108 | - | |
Cre10g2310 | 896 | Pfam | Mitochondrial carrier protein | 602 | 692 | IPR018108 | - | |
Cre10g2310 | 896 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 697 | 780 | IPR018108 | - | |
Cre10g2310 | 896 | NCBIfam | calcium/proton exchanger | 76 | 423 | IPR004798 | GO:0006816(InterPro)|GO:0015369(InterPro) | |
Cre10g2310 | 896 | FunFam | Vacuolar cation/proton exchanger | 268 | 424 | - | - | |
Cre10g2310 | 896 | FunFam | Envelope ADP,ATP carrier protein | 599 | 877 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre07g0714 | Cre-Chr7:5144282 | Cre10g2310 | Cre-Chr10:37336169 | 9.80E-37 | dispersed | |
Cre08g1650 | Cre-Chr8:28994345 | Cre10g2310 | Cre-Chr10:37336169 | 1.20E-37 | dispersed | |
Cre10g0647 | Cre-Chr10:6088277 | Cre10g2310 | Cre-Chr10:37336169 | 3.30E-91 | dispersed | |
Cre04g0803 | Cre-Chr4:26711682 | Cre10g2310 | Cre-Chr10:37336169 | 5.80E-145 | transposed | |
Cre10g2310 | Cre-Chr10:37336169 | Cre03g0393 | Cre-Chr3:2385772 | 9.10E-119 | wgd | |
Cre10g2310 | Cre-Chr10:37336169 | Cre04g0802 | Cre-Chr4:26701840 | 2.30E-162 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g2310 | K07300 | - | csv:101213421 | 668.692 |