Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2318 ATGGAAGGCCATAATCCTCATTCTCATCCTCATCCCCATCCCCTTATTCAGCTCCACCAGCAGCAACAAATTCAACTTCCTCCGCCACCGCCGCATCTCCACCAGAGCCTCGCCGTCTCCGCCGATCAAACCACAGCAACAGCCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTGATGATCAGAGCCGAGCTGGATCAAACCTTCATGGAAACCAAACGAAACAAGCTCTTGTGGGAAATTACTGCCTCCAAAATGAAGGAAAAGGGTTTTAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTTACTCGTTACAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGTTACAAGCAATATTTGGGGCAAGAATGCAAAGAATATTGTGGGCAGAGGCGGAGAGCGGCGGTAGCGGGTCGAAGAAGAAGACATTACCATTATCGTCTGACGATGACGAAGAAAACGACGATAGCGATGGCGATGGAGGCGAGACGAAAGTTAGCGGTAGGAAAAGGAAAAAAGTTAAAGGAATGGGCGGTACGACGACGGGAGGCGGCGAGGGCAGTGGAAAGAGTAGTATCAATGATTTGAAAGAAATGTTGGAAGATTTTATGAATCAACAAATGCAAATGGAGGTGCAATGGAGGGAGGCATTTGAGGCAAGGGAAAAAGAGAGACAAATGAGGGAAATGGAATGGAGAAGAAACATGGAAGCTTTAGAACATGAGAGGATAATCTTGGTTACAGAAATTGGGCAAACCGTGTTTTGTCTCAGAAATGGCACAGTAACTTCACTTCTCATTTTTATATTTCACCGACACACCATGTTGTCCCATACACCTGCTTCCTAG 906 45.58 MEGHNPHSHPHPHPLIQLHQQQQIQLPPPPPHLHQSLAVSADQTTATAADRFPQWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMQRILWAEAESGGSGSKKKTLPLSSDDDEENDDSDGDGGETKVSGRKRKKVKGMGGTTTGGGEGSGKSSINDLKEMLEDFMNQQMQMEVQWREAFEAREKERQMREMEWRRNMEALEHERIILVTEIGQTVFCLRNGTVTSLLIFIFHRHTMLSHTPAS 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 37430145 37433137 + CrPI670011_10g023180.1 Cre10g2318 511620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2318 301 Pfam Myb/SANT-like DNA-binding domain 54 138 IPR044822 -
Cre10g2318 301 MobiDBLite consensus disorder prediction 152 212 - -
Cre10g2318 301 Coils Coil 212 232 - -
Cre10g2318 301 Gene3D - 55 116 - -
Cre10g2318 301 ProSiteProfiles Myb-like domain profile. 55 111 IPR001005 -
Cre10g2318 301 PANTHER FI21293P1 27 268 - -
Cre10g2318 301 FunFam Zinc finger and SCAN domain-containing 20 55 116 - -
Cre10g2318 301 CDD GT1 53 118 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1494 Cre-Chr7:30169560 Cre10g2318 Cre-Chr10:37430145 5.70E-19 transposed
Cre10g2318 Cre-Chr10:37430145 Cre04g0799 Cre-Chr4:26616908 5.90E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54626 PF13837 Myb_DNA-bind_4 2.40E-18 CL0123 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2318 - - - 0.0