Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g2318 | ATGGAAGGCCATAATCCTCATTCTCATCCTCATCCCCATCCCCTTATTCAGCTCCACCAGCAGCAACAAATTCAACTTCCTCCGCCACCGCCGCATCTCCACCAGAGCCTCGCCGTCTCCGCCGATCAAACCACAGCAACAGCCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTGATGATCAGAGCCGAGCTGGATCAAACCTTCATGGAAACCAAACGAAACAAGCTCTTGTGGGAAATTACTGCCTCCAAAATGAAGGAAAAGGGTTTTAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTTACTCGTTACAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGTTACAAGCAATATTTGGGGCAAGAATGCAAAGAATATTGTGGGCAGAGGCGGAGAGCGGCGGTAGCGGGTCGAAGAAGAAGACATTACCATTATCGTCTGACGATGACGAAGAAAACGACGATAGCGATGGCGATGGAGGCGAGACGAAAGTTAGCGGTAGGAAAAGGAAAAAAGTTAAAGGAATGGGCGGTACGACGACGGGAGGCGGCGAGGGCAGTGGAAAGAGTAGTATCAATGATTTGAAAGAAATGTTGGAAGATTTTATGAATCAACAAATGCAAATGGAGGTGCAATGGAGGGAGGCATTTGAGGCAAGGGAAAAAGAGAGACAAATGAGGGAAATGGAATGGAGAAGAAACATGGAAGCTTTAGAACATGAGAGGATAATCTTGGTTACAGAAATTGGGCAAACCGTGTTTTGTCTCAGAAATGGCACAGTAACTTCACTTCTCATTTTTATATTTCACCGACACACCATGTTGTCCCATACACCTGCTTCCTAG | 906 | 45.58 | MEGHNPHSHPHPHPLIQLHQQQQIQLPPPPPHLHQSLAVSADQTTATAADRFPQWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMQRILWAEAESGGSGSKKKTLPLSSDDDEENDDSDGDGGETKVSGRKRKKVKGMGGTTTGGGEGSGKSSINDLKEMLEDFMNQQMQMEVQWREAFEAREKERQMREMEWRRNMEALEHERIILVTEIGQTVFCLRNGTVTSLLIFIFHRHTMLSHTPAS | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 37430145 | 37433137 | + | CrPI670011_10g023180.1 | Cre10g2318 | 511620 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g2318 | 301 | Pfam | Myb/SANT-like DNA-binding domain | 54 | 138 | IPR044822 | - | |
Cre10g2318 | 301 | MobiDBLite | consensus disorder prediction | 152 | 212 | - | - | |
Cre10g2318 | 301 | Coils | Coil | 212 | 232 | - | - | |
Cre10g2318 | 301 | Gene3D | - | 55 | 116 | - | - | |
Cre10g2318 | 301 | ProSiteProfiles | Myb-like domain profile. | 55 | 111 | IPR001005 | - | |
Cre10g2318 | 301 | PANTHER | FI21293P1 | 27 | 268 | - | - | |
Cre10g2318 | 301 | FunFam | Zinc finger and SCAN domain-containing 20 | 55 | 116 | - | - | |
Cre10g2318 | 301 | CDD | GT1 | 53 | 118 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre07g1494 | Cre-Chr7:30169560 | Cre10g2318 | Cre-Chr10:37430145 | 5.70E-19 | transposed | |
Cre10g2318 | Cre-Chr10:37430145 | Cre04g0799 | Cre-Chr4:26616908 | 5.90E-38 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54626 | PF13837 | Myb_DNA-bind_4 | 2.40E-18 | CL0123 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g2318 | - | - | - | 0.0 |