Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g2370 | ATGAGAAGATGCCTTTTCAACTATGGAAATAAGAATCAAGTTCCAGAGTCCAAGTTAGATAAAGACCCCATGGATTTTTGTTATTGCTTTCTTTTCTCGCGGATAAAGTTTCCTCGGAAATTTTGGCGTCAACTATGTTCTACTGATTGCAAACCAGGAAATGTGAATGACTGTATGAGTTGTAACGAGAAGAATAGAGGGGTAGATGATAGGGAAACTGAACAGCCAGTTTTTAGGAACTCTGTCGAGGCACAACGGATACCAGCCATCCAGAATGGATCCATAACGGCCCAACAGTTGACGATTGATGATAATCTTCTTGTTGACCCAAAATTGCTATTTATTGGATCGAAGATTGGTGAGGGTGCTCACGGGAAGGTTTATGAAGGCAGGTACCGGAACCAAATTGTGGCCATTAAAGTTCTCCATCGAGGGAGTACTCCAGAAGAAAGAGCAGCTCTTGAAAATCGTTTTGCCCGTGAAGTAAATATGATGTCCCGAGTAAAACATGAAAATCTTGTCAAGTTCATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAATAATCGTAAGCAACAGCTGGACCCTCGGATGGCCATTAACTTTGCTTTGGATGTTGCTCGTGCTATGGATTGTCTACATGCAAATGGGATTATACATAGAGATCTGAAACCTGATAATTTGTTGCTTACTGCAAATCAAAGATCTGTGAAGCTTGCAGACTTTGGACTTGCTAGAGAAGAATCTGTGACTGAGATGATGACTGCTGAAACAGGGACTTACCGCTGGATGGCTCCTGAGTTGTATAGCACTGTGACATTGCGCCAGGGAGAGAAAAAGCATTACAACAACAAAGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAGCTCTTGACCAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCTTATGCTGCTGCTTTCAAGCAAGAGAGACCTAGTATTCCAGGTGACATACCTCCCGATTTAGCATTTGTAGTACAGTCGTGTTGGGTTGAAGATCCTAACATGAGGCCCAGCTTCAGCCAGATCATCCGCATGCTTAATGCTTATCTGTTTACACTCCCAACTCCTTCACCATCTTCACCATCTTCACCATCTTCACCAAAATCTGACACAACAGAGACAGCAACAACTAGCAATGGTGCTATTACCGAGTTCTCTGCTCGTGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAGAGGGCTAAGAACTCGCAATGA | 1314 | 43.0 | MRRCLFNYGNKNQVPESKLDKDPMDFCYCFLFSRIKFPRKFWRQLCSTDCKPGNVNDCMSCNEKNRGVDDRETEQPVFRNSVEAQRIPAIQNGSITAQQLTIDDNLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTPEERAALENRFAREVNMMSRVKHENLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQQLDPRMAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFVVQSCWVEDPNMRPSFSQIIRMLNAYLFTLPTPSPSSPSSPSSPKSDTTETATTSNGAITEFSARARGKFGFLRQLFAAKRAKNSQ | 437 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 37805218 | 37809403 | + | CrPI670011_10g023700.1 | Cre10g2370 | 511672 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g2370 | 437 | ProSitePatterns | Protein kinases ATP-binding region signature. | 119 | 140 | IPR017441 | GO:0005524(InterPro) | |
Cre10g2370 | 437 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 92 | 375 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cre10g2370 | 437 | MobiDBLite | consensus disorder prediction | 384 | 411 | - | - | |
Cre10g2370 | 437 | SUPERFAMILY | Protein kinase-like (PK-like) | 112 | 403 | IPR011009 | - | |
Cre10g2370 | 437 | SMART | serkin_6 | 113 | 378 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g2370 | 437 | PRINTS | Tyrosine kinase catalytic domain signature | 189 | 202 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g2370 | 437 | PRINTS | Tyrosine kinase catalytic domain signature | 227 | 245 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g2370 | 437 | PRINTS | Tyrosine kinase catalytic domain signature | 301 | 323 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g2370 | 437 | PRINTS | Tyrosine kinase catalytic domain signature | 345 | 367 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g2370 | 437 | Gene3D | Phosphorylase Kinase; domain 1 | 101 | 192 | - | - | |
Cre10g2370 | 437 | MobiDBLite | consensus disorder prediction | 392 | 411 | - | - | |
Cre10g2370 | 437 | ProSiteProfiles | Protein kinase domain profile. | 113 | 378 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g2370 | 437 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 233 | 245 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g2370 | 437 | FunFam | Kinase suppressor of Ras 1 | 102 | 192 | - | - | |
Cre10g2370 | 437 | Gene3D | Transferase(Phosphotransferase) domain 1 | 196 | 405 | - | - | |
Cre10g2370 | 437 | Pfam | Protein tyrosine and serine/threonine kinase | 115 | 374 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g2370 | 437 | CDD | STKc_MAP3K-like | 119 | 374 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g0525 | Cre-Chr1:4536100 | Cre10g2370 | Cre-Chr10:37805218 | 1.80E-112 | dispersed | |
Cre06g2601 | Cre-Chr6:33704064 | Cre10g2370 | Cre-Chr10:37805218 | 6.90E-116 | dispersed | |
Cre10g1526 | Cre-Chr10:29191485 | Cre10g2370 | Cre-Chr10:37805218 | 4.10E-115 | dispersed | |
Cre10g2370 | Cre-Chr10:37805218 | Cre11g1556 | Cre-Chr11:25129522 | 1.80E-64 | dispersed | |
Cre10g2370 | Cre-Chr10:37805218 | Cre04g1918 | Cre-Chr4:36749287 | 5.30E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64511 | PF07714 | PK_Tyr_Ser-Thr | 1.60E-61 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g2370 | - | - | - | 0.0 |