Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g2370 ATGAGAAGATGCCTTTTCAACTATGGAAATAAGAATCAAGTTCCAGAGTCCAAGTTAGATAAAGACCCCATGGATTTTTGTTATTGCTTTCTTTTCTCGCGGATAAAGTTTCCTCGGAAATTTTGGCGTCAACTATGTTCTACTGATTGCAAACCAGGAAATGTGAATGACTGTATGAGTTGTAACGAGAAGAATAGAGGGGTAGATGATAGGGAAACTGAACAGCCAGTTTTTAGGAACTCTGTCGAGGCACAACGGATACCAGCCATCCAGAATGGATCCATAACGGCCCAACAGTTGACGATTGATGATAATCTTCTTGTTGACCCAAAATTGCTATTTATTGGATCGAAGATTGGTGAGGGTGCTCACGGGAAGGTTTATGAAGGCAGGTACCGGAACCAAATTGTGGCCATTAAAGTTCTCCATCGAGGGAGTACTCCAGAAGAAAGAGCAGCTCTTGAAAATCGTTTTGCCCGTGAAGTAAATATGATGTCCCGAGTAAAACATGAAAATCTTGTCAAGTTCATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAATAATCGTAAGCAACAGCTGGACCCTCGGATGGCCATTAACTTTGCTTTGGATGTTGCTCGTGCTATGGATTGTCTACATGCAAATGGGATTATACATAGAGATCTGAAACCTGATAATTTGTTGCTTACTGCAAATCAAAGATCTGTGAAGCTTGCAGACTTTGGACTTGCTAGAGAAGAATCTGTGACTGAGATGATGACTGCTGAAACAGGGACTTACCGCTGGATGGCTCCTGAGTTGTATAGCACTGTGACATTGCGCCAGGGAGAGAAAAAGCATTACAACAACAAAGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAGCTCTTGACCAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCTTATGCTGCTGCTTTCAAGCAAGAGAGACCTAGTATTCCAGGTGACATACCTCCCGATTTAGCATTTGTAGTACAGTCGTGTTGGGTTGAAGATCCTAACATGAGGCCCAGCTTCAGCCAGATCATCCGCATGCTTAATGCTTATCTGTTTACACTCCCAACTCCTTCACCATCTTCACCATCTTCACCATCTTCACCAAAATCTGACACAACAGAGACAGCAACAACTAGCAATGGTGCTATTACCGAGTTCTCTGCTCGTGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAGAGGGCTAAGAACTCGCAATGA 1314 43.0 MRRCLFNYGNKNQVPESKLDKDPMDFCYCFLFSRIKFPRKFWRQLCSTDCKPGNVNDCMSCNEKNRGVDDRETEQPVFRNSVEAQRIPAIQNGSITAQQLTIDDNLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTPEERAALENRFAREVNMMSRVKHENLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQQLDPRMAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFVVQSCWVEDPNMRPSFSQIIRMLNAYLFTLPTPSPSSPSSPSSPKSDTTETATTSNGAITEFSARARGKFGFLRQLFAAKRAKNSQ 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 37805218 37809403 + CrPI670011_10g023700.1 Cre10g2370 511672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g2370 437 ProSitePatterns Protein kinases ATP-binding region signature. 119 140 IPR017441 GO:0005524(InterPro)
Cre10g2370 437 PANTHER SERINE-THREONINE PROTEIN KINASE 92 375 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cre10g2370 437 MobiDBLite consensus disorder prediction 384 411 - -
Cre10g2370 437 SUPERFAMILY Protein kinase-like (PK-like) 112 403 IPR011009 -
Cre10g2370 437 SMART serkin_6 113 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g2370 437 PRINTS Tyrosine kinase catalytic domain signature 189 202 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g2370 437 PRINTS Tyrosine kinase catalytic domain signature 227 245 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g2370 437 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g2370 437 PRINTS Tyrosine kinase catalytic domain signature 345 367 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g2370 437 Gene3D Phosphorylase Kinase; domain 1 101 192 - -
Cre10g2370 437 MobiDBLite consensus disorder prediction 392 411 - -
Cre10g2370 437 ProSiteProfiles Protein kinase domain profile. 113 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g2370 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g2370 437 FunFam Kinase suppressor of Ras 1 102 192 - -
Cre10g2370 437 Gene3D Transferase(Phosphotransferase) domain 1 196 405 - -
Cre10g2370 437 Pfam Protein tyrosine and serine/threonine kinase 115 374 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g2370 437 CDD STKc_MAP3K-like 119 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0525 Cre-Chr1:4536100 Cre10g2370 Cre-Chr10:37805218 1.80E-112 dispersed
Cre06g2601 Cre-Chr6:33704064 Cre10g2370 Cre-Chr10:37805218 6.90E-116 dispersed
Cre10g1526 Cre-Chr10:29191485 Cre10g2370 Cre-Chr10:37805218 4.10E-115 dispersed
Cre10g2370 Cre-Chr10:37805218 Cre11g1556 Cre-Chr11:25129522 1.80E-64 dispersed
Cre10g2370 Cre-Chr10:37805218 Cre04g1918 Cre-Chr4:36749287 5.30E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64511 PF07714 PK_Tyr_Ser-Thr 1.60E-61 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g2370 - - - 0.0