Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g2392 | ATGTCACCTGTGCAAACGCTGCTACTTTTCGCTTTCTTCTACGCTGGGATCGACACAACCGGTTCTTTCACTGATCCCCGCGATTCTGCGGCGCTGGAATCCCTGAAAAACGAATGGCAAAATACACCACCAAGCTGGGGAGCATCAAATGATCCGTGTGGAGCTCCCTGGGAAGGAGTGGCTTGCATCAATTCAAGAGTCACGGCACTGAGATTATCAACTATGGGCCTGAAAGGTAAACTTGGTGGTGACATTGGAGGCCTGACCGAACTAAAATCATTGGACCTTTCGTTCAATAAAGATCTCACTGGTTCAATCTCTCCAGCATTAGGGGATCTACAGAGTTTGAGTATCTTGATCCTGGCTGGGTGTGGCTTCAGTGGCAGTATTCCTGAACAACTGGGCAATCTTTCCAATCTATCCTTCTTGGCTTTAAACTCTAACAACTTCACTGGTTCCATACCGCCATCTCTGGGGAAACTCTCCAATCTCTATTGGCTGGACCTGGCAGATAATCAATTGACAGGTAGTCTCCCAGTCTCGACTTCCCAATCTTCTGGTTTGGACCTCCTTCTGAAGGCTAAACACTTTCATTTCAACAAAAACCAGTTGTCAGGTTCCATTTCACCTAAACTTTTTAGCTCTGAGATGGTATTAATACACATATTATTTGATGGAAATAATTTTTCTGGGAATATCCCACCGACACTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTAGATCGGAATTCTCTGACAGGAACTGTCCCATCAAATCTGAACAACCTAACAAATATCAATGAATTGAATTTAGCCAACAATAAGTTGACGGGTCCACTGCCAAACTTAACTCAAATGAGCTCACTAAATTACTTGGACCTTAGTAACAACTCATTTGATTCATCAGAAGCTCCAGAATGGTTCTCAAATCTACAATCTCTCACCACTCTGATCATTGAATTTGGGTCAATTCGAGGACCTGTGCCAGAAGGAGTGTTTAGCTTACCACAAATACAACAAATAAAATTGAAGAATAATGCATTTAGTGACACATTTAATATGGGTGACAAAGTCAGCGAACAGTTGCAGCTCGTTGATTTGCAAAATAACAATATTTCCCATTTTACCCTTGGTTCAAGATACACCAAAACTTTGATGCTTATAGGGAATCCTGTGTGTAGCACTGATGCTACCCTCTCAAATACAAACTACTGCCAAGTTCAAAATCAACCGGTGAAACCCTATTCAACCAGCCTTGCCAGTTGTTTAAGTAAGTCATGTTCTCCAGATGAGAAGTTAAGTCCTCAGAGTTGTGAATGTGCCTATCCATTTGAAGGGACTTTATACTTTAGAGCACCCTCGTTCAGGGAATTGTCCAATGTGACTTTGTTTCATTCTTTGGAAATGAGCCTTTGGAAAAAACTGGACCTTACACCGGGTTCAGTTTCTATTCAAAACCCTTTCTTCAATGTTGATGATTATCTTCAGATGCAAATTGCACTTTTTCCACCAGACGGAAAGTATTTTAATAGGTCAGATATTCAGAGGATTGGGTTTGACTTGAGCAATCAAACCTACAAACCTCCCCCAGAATTTGGGCCATTTTATTTCATTGCATCTCCCTACGGTTTTGCAGGCACGGCTAGGGGAACTTCAATCAGCCCTGGAGTGATAATTGGGGTAGCTATTGGTTGTGCCTTCCTCATTCTAGGCCTCATTGGAGTTGGAATATATGCAATTCGGCAAAAGAAACGTGCAGAAAAGGCCATCGGGATGAGTCGGCCATTTGCTTCTTGGGCACCAAGTGGCAATGATAGTGGGGGCGCACCACAATTGAAGGGAGCCCGATGGTTTTCTTATGATGAACTTAAAAAATGCACAAATAATTTCTCCATGAGCAATGAGGTAGGATCTGGAGGATATGGCAAGGTATATAGAGGAATGCTTGTGGATGGACAAGCAGTTGCAATCAAAAGAGCTCAGCAAGGATCAATGCAAGGTGGCCTTGAGTTCAAGACGGAAATCGAACTGCTTTCACGAGTTCATCACAAGAACCTTCTTGGCCTCGTGGGATTTTGTTTTGAACAAGGAGAACAGATGCTTGTTTATGAATTTATGCCTAATGGAACTCTGAGAGATAGCCTATCTGGAAAATCTGGTATCAATCTTGACTGGAAGAGAAGACTTCGTATTGCACTTGGGTCTGCCAGAGGATTGACTTACTTGCATGAACTTGCTAATCCTCCCATAATCCATAGAGACATTAAGTCCACCAATATTTTATTGGATGAACATTTAAATGCAAAAGTTGCAGATTTTGGCTTGTCCAAGCTTGTCTCAGACAGCGAAAAGGGACACGTTTCTACTCAAGTTAAAGGGACGTTGGGTTATTTGGATCCCGAATATTACATGACTCAACAATTGACGGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTATGTTGGAATTATTAACGGCTAAGCTGCCTATCGAGAAAGGAAAGTATGTAGTTCGTGAGGTGCGCATGTTGATGAATAAAAGTGAAGAAGAATATTATGGTCTGAAGCAGATAATGGATGTAACCATAATAAATAATACAACGACCATTATTGGGCTTGGAAGGTTCTTGGAGTTGGCCATGCAATGCGTTGAAGAATCAGCTGTAGATCGTCCCACAATGAGTGAAGTGGTCAAGGCAATTGAGAGTATTTTGCAGAATGATGGAATTAATACGAACACAACATCTGCATCCTCGTCTGCAACTGACTTTGGGGCTTCCAGAACCGCTCCTAGGCATCCCTATAATGATTCGATACCAAAAAAGGATGCTAATGACAGCAATGCTTTTGATTACAGTGGTGGATACACTCATTCGACAAAAGTGGAGCCCAAATAG | 2901 | 42.09 | MSPVQTLLLFAFFYAGIDTTGSFTDPRDSAALESLKNEWQNTPPSWGASNDPCGAPWEGVACINSRVTALRLSTMGLKGKLGGDIGGLTELKSLDLSFNKDLTGSISPALGDLQSLSILILAGCGFSGSIPEQLGNLSNLSFLALNSNNFTGSIPPSLGKLSNLYWLDLADNQLTGSLPVSTSQSSGLDLLLKAKHFHFNKNQLSGSISPKLFSSEMVLIHILFDGNNFSGNIPPTLGLVKTLEVLRLDRNSLTGTVPSNLNNLTNINELNLANNKLTGPLPNLTQMSSLNYLDLSNNSFDSSEAPEWFSNLQSLTTLIIEFGSIRGPVPEGVFSLPQIQQIKLKNNAFSDTFNMGDKVSEQLQLVDLQNNNISHFTLGSRYTKTLMLIGNPVCSTDATLSNTNYCQVQNQPVKPYSTSLASCLSKSCSPDEKLSPQSCECAYPFEGTLYFRAPSFRELSNVTLFHSLEMSLWKKLDLTPGSVSIQNPFFNVDDYLQMQIALFPPDGKYFNRSDIQRIGFDLSNQTYKPPPEFGPFYFIASPYGFAGTARGTSISPGVIIGVAIGCAFLILGLIGVGIYAIRQKKRAEKAIGMSRPFASWAPSGNDSGGAPQLKGARWFSYDELKKCTNNFSMSNEVGSGGYGKVYRGMLVDGQAVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCFEQGEQMLVYEFMPNGTLRDSLSGKSGINLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDEHLNAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYVVREVRMLMNKSEEEYYGLKQIMDVTIINNTTTIIGLGRFLELAMQCVEESAVDRPTMSEVVKAIESILQNDGINTNTTSASSSATDFGASRTAPRHPYNDSIPKKDANDSNAFDYSGGYTHSTKVEPK | 966 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 37962893 | 37971198 | + | CrPI670011_10g023920.1 | Cre10g2392 | 511694 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g2392 | 966 | Gene3D | Transferase(Phosphotransferase) domain 1 | 707 | 930 | - | - | |
Cre10g2392 | 966 | ProSiteProfiles | Protein kinase domain profile. | 631 | 906 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g2392 | 966 | Gene3D | Ribonuclease Inhibitor | 219 | 283 | IPR032675 | - | |
Cre10g2392 | 966 | MobiDBLite | consensus disorder prediction | 912 | 927 | - | - | |
Cre10g2392 | 966 | CDD | STKc_IRAK | 637 | 905 | - | - | |
Cre10g2392 | 966 | ProSitePatterns | Protein kinases ATP-binding region signature. | 637 | 659 | IPR017441 | GO:0005524(InterPro) | |
Cre10g2392 | 966 | FunFam | Leucine-rich repeat protein kinase family protein | 600 | 706 | - | - | |
Cre10g2392 | 966 | Gene3D | Ribonuclease Inhibitor | 25 | 218 | IPR032675 | - | |
Cre10g2392 | 966 | FunFam | Predicted protein | 186 | 405 | - | - | |
Cre10g2392 | 966 | Gene3D | Ribonuclease Inhibitor | 284 | 423 | IPR032675 | - | |
Cre10g2392 | 966 | SMART | serkin_6 | 631 | 906 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g2392 | 966 | SUPERFAMILY | Protein kinase-like (PK-like) | 616 | 916 | IPR011009 | - | |
Cre10g2392 | 966 | FunFam | Leucine-rich repeat family protein | 27 | 183 | - | - | |
Cre10g2392 | 966 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 707 | 919 | - | - | |
Cre10g2392 | 966 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 751 | 763 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g2392 | 966 | MobiDBLite | consensus disorder prediction | 912 | 966 | - | - | |
Cre10g2392 | 966 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 39 | 903 | - | - | |
Cre10g2392 | 966 | SUPERFAMILY | L domain-like | 43 | 411 | - | - | |
Cre10g2392 | 966 | Gene3D | Phosphorylase Kinase; domain 1 | 605 | 706 | - | - | |
Cre10g2392 | 966 | Pfam | Leucine Rich Repeat | 139 | 161 | IPR001611 | GO:0005515(InterPro) | |
Cre10g2392 | 966 | Pfam | Leucine Rich Repeat | 243 | 264 | IPR001611 | GO:0005515(InterPro) | |
Cre10g2392 | 966 | Pfam | Leucine Rich Repeat | 289 | 312 | IPR001611 | GO:0005515(InterPro) | |
Cre10g2392 | 966 | Pfam | Leucine Rich Repeat | 115 | 137 | IPR001611 | GO:0005515(InterPro) | |
Cre10g2392 | 966 | Pfam | Protein tyrosine and serine/threonine kinase | 633 | 901 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g0224 | Cre-Chr5:2146417 | Cre10g2392 | Cre-Chr10:37962893 | 2.00E-62 | dispersed | |
Cre08g0225 | Cre-Chr8:5852521 | Cre10g2392 | Cre-Chr10:37962893 | 1.10E-59 | dispersed | |
Cre10g1471 | Cre-Chr10:28570798 | Cre10g2392 | Cre-Chr10:37962893 | 0.00E+00 | dispersed | |
Cre10g2392 | Cre-Chr10:37962893 | Cre11g1014 | Cre-Chr11:7454804 | 6.90E-72 | dispersed | |
Cre02g0349 | Cre-Chr2:589792 | Cre10g2392 | Cre-Chr10:37962893 | 2.80E-259 | transposed | |
Cre10g2392 | Cre-Chr10:37962893 | Cre04g0723 | Cre-Chr4:25370642 | 3.80E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64515 | PF07714 | PK_Tyr_Ser-Thr | 5.80E-47 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g2392 | - | - | - | 0.0 |