Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0504 ATGGATGAAAATGGTGGGATAAAGTTGAGTGGAATCCGGCAGATTGTGAGGCTGAAAGAGACTCTCCAACATTGGCAAGGCGTCACAGTTTGCCCCAAATCCAAAGCAGCAGCAGCCCATGAAAATGGAGGCCAAAATCAAAATCATAATCATGGGATCCTTTCACCAGCAATCAACAAAAGGCTGACAAATGTGTTGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAGCATCCACCCGATGTCCCCAAAGGGTATTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTTATCATTCCCACCAGCTATCTTAGTCATTCCGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTCGATCATACCGGCGGGCTCACTTTCCCATGCGAGATCGAAACATTCAAATACCTTCTCAAGTGCATGGAGAGCCAGCAGAAGGATCATCCTGATGACCACACCCCAGCTGAGAGTTCATTGACTATGGAAGGATAA 510 48.24 MDENGGIKLSGIRQIVRLKETLQHWQGVTVCPKSKAAAAHENGGQNQNHNHGILSPAINKRLTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDHTGGLTFPCEIETFKYLLKCMESQQKDHPDDHTPAESSLTMEG 169
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 1898853 1900022 - CrPI670011_11g005040.1 Cre11g0504 512249
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0504 169 Pfam Auxin responsive protein 57 146 IPR003676 GO:0009733(InterPro)
Cre11g0504 169 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 147 IPR003676 GO:0009733(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0584 Cre-Chr3:4596100 Cre11g0504 Cre-Chr11:1898853 1.10E-10 dispersed
Cre05g2797 Cre-Chr5:38697282 Cre11g0504 Cre-Chr11:1898853 2.90E-18 dispersed
Cre08g0713 Cre-Chr8:20143306 Cre11g0504 Cre-Chr11:1898853 2.80E-14 dispersed
Cre08g1390 Cre-Chr8:26893730 Cre11g0504 Cre-Chr11:1898853 3.00E-16 dispersed
Cre10g2001 Cre-Chr10:34696437 Cre11g0504 Cre-Chr11:1898853 2.00E-13 dispersed
Cre11g0504 Cre-Chr11:1898853 Cre11g0866 Cre-Chr11:5762988 6.70E-15 dispersed
Cre11g0504 Cre-Chr11:1898853 Cre04g1107 Cre-Chr4:29729947 3.20E-17 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0504 K14488 - csv:101207913 314.694