Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0535 ATGGAAGATCAGAATAGTTTGAAATCACGGTGGCGTTTACGTTACTGCTATGCACATGGAGGAATAGCTGCCGGGGAAAGTCGTGGTTATCCAAGAATTGGTGAACATATGGAGCATGGAGATCGAATTGAAGAAGGTAGCTCCAGATTGCTGCGGGGCAATAGCGTTGCTGGGAGTAGTAATGATTACAGGTGGGTTGACGGTAGTGAAGTCGACTCCGAATCGCCTCCTTGGTCGCTGTTTGAAGAAAGAGAGAGCGGGGAAGGATATGGATCTATCAGAAGGAGGTTAATTAAGAAGCCCAAGAGAGTTGATTCTTTTGATGTTGAAGCAATGGAGATTGCCGGTGCCAACTATCACCATTTAAAGGATGTTTCCCTTTGGCAAACTATTGCTATAGCATTTCAAACACTTGGTGTTGTGTATGGTGACATGGGTACAAGTCCATTATACGTCTTTGCTGATGTATTTAGCAAGGTGCATATTGAGGCAGATGTTGATGTCTTGGGGGCTCTTTCCTTAGTGATTTATACAATTGCTCTTATTCCTTTGGCAAAATATGTTTTTGTAGTGCTCAGAGCCAACGACAATGGGGAAGGAGGAACATTTGCATTGTATTCACTTATCTGTAGGTATGCCAAAGTTAACATGCTGCCAAACCGTCAGCCAGCTGACGAACATATCTCAAGTTTTAAGCTTAAACTTCCCACTCCAGAGTTGGAAAGGGCCTTACATATCAAAGAGACTTTGGAGAAGAGATCATCCTTGAAAACTCTTATATTGCTGTTGGTTCTCATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTCTGCAGGGACAAATAAAGTCATTTGATACAAATGCTGTGGTTATTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGAACTGGGAAAGTAGGATTTATGTTTGCTCCTGTCCTTGCTTTGTGGTTTTTTAGTTTGGGATCTATTGGAATTTACAATGTAGTGAAGTATGATCCCACCGTTGTAAGGGCTCTCAATCCCACTTACATCTATTTATTCTTCAAGAAAAATTCAAAAAATGCATGGTCAGCTCTCGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCCATGTTCGCCGATCTAGGCCATTTCACTGTGCCAGCCATACAGATTGCCTTCACATGTGTTGTTTTCCCCTGCCTTCTCTTGGCATACATGGGCCAGGCTGCGTACCTTTTGAAACATCCAGATTCTGCAGCAAGAATATTTTATGATTCTGTGCCAGCAAGTCTTTTTTGGCCGGTCTTTGTGACAGCAACACTTGCTGCTATGATTGCGAGCCAAGCAATGATTTCTGCAACCTTTTCTTGTGTCAAGCAATCTATGGCTCTTGGATGTTTTCCAAGAATGAAGATAGTTCACACCTCTAAGAGACGAATGGGTCAAATTTACATCCCTGTGATCAATTGGTTTTTGATGATAATGTGCATATTTGTCGTTGCAATATTTCGAAGGACTACAGACATCGCCAATGCTTATGGTATTGCTGAAGTTGGTGTGATGTTGGTGAGCACTGTCCTGGTGACTCTAGTAATGCTCCTAATCTGGCAGACAAATTTGTTTCTTGCGTTTTGTTTCCCACTTGTATTTGGGTCAGTGGAAGTTATCTACTTATCTGCAGTTCTATCAAAAATCAGAGAGGGTGGATGGTTGCCACTTGCTTTTGCTTCCGTCTTCCTCTCTGTGATGTACACATGGAACTATGGGAGTGTGTTGAAGTACCAAAGTGAGGTGAGAGACAAAATATCAACGGATTTCTTGCTTGAACTGGGTTCTACACTTGGAACTGTAAGAGTTCCAGGAATTGGTCTCCTGTACAATGAGCTTGTCCAAGGCATTCCTGCAATTTTTGGGCAATTTCTTCTTAGCCTTCCAGCCATCCACTCCACAATTGTGTTTGTGTGCATTAAATATGTTCCAATCCCCGTGGTTCCACAAGAGGAAAGGTTTTTGTTTAGGAGGGTTGGCCCAAAAGATTACCATATGTTCCGTTGCATCGCAAGATATGGTTACAAGGATGTGCGGAAGGAAGATCACCATGCGTTTGAGCAACTTTTGATGGAGAGCCTTGAGAAGTTCTTAAGAAAGGAGTCTCAAGATCTTGCCCTGGAGAGCAATTTGAATGAGTTGCAATTCGACAATATTTCAGAGAGGTCGCGGGATTCTCCATCTCGAGGTGCTGCTGATGTGAATGAGGAGCTGAGAATTCCATTGATGGAACAGGAAAGAACTGTGGATTCGGAAGAAGGTTATGGGGTGCGGTTGCCATCCAGCATTATGGCATCAGATGACGACCCTAGTTTGGAGTATGAGCTATCAGCCCTTCGGGAAGCAATGGATTCAGGATTTACGTATCTATTGGCCCAAGGGGACGTTCGAGCAAAGAAAAACTCATTTTTTGTTAAGAAGCTTGTTATAAACTATTTCTATGCATTCCTAAGGAGGAACTGTAGGGGTGGTGCAGCAACAATGCGAGTTCCTCACATGAACATTATGCAAGTTGGGATGACTTACATGGTTTGA 2625 42.9 MEDQNSLKSRWRLRYCYAHGGIAAGESRGYPRIGEHMEHGDRIEEGSSRLLRGNSVAGSSNDYRWVDGSEVDSESPPWSLFEERESGEGYGSIRRRLIKKPKRVDSFDVEAMEIAGANYHHLKDVSLWQTIAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNMLPNRQPADEHISSFKLKLPTPELERALHIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVIVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNVVKYDPTVVRALNPTYIYLFFKKNSKNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLLKHPDSAARIFYDSVPASLFWPVFVTATLAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCIFVVAIFRRTTDIANAYGIAEVGVMLVSTVLVTLVMLLIWQTNLFLAFCFPLVFGSVEVIYLSAVLSKIREGGWLPLAFASVFLSVMYTWNYGSVLKYQSEVRDKISTDFLLELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHMFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKESQDLALESNLNELQFDNISERSRDSPSRGAADVNEELRIPLMEQERTVDSEEGYGVRLPSSIMASDDDPSLEYELSALREAMDSGFTYLLAQGDVRAKKNSFFVKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 874
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2351729 2357537 + CrPI670011_11g005350.1 Cre11g0535 512280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0535 874 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 115 874 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre11g0535 874 Pfam K+ potassium transporter integral membrane domain 134 621 IPR053951 -
Cre11g0535 874 NCBIfam potassium uptake protein 133 873 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre11g0535 874 Pfam K+ potassium transporter C-terminal domain 634 872 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0885 Cre-Chr7:7660789 Cre11g0535 Cre-Chr11:2351729 9.30E-192 dispersed
Cre09g0579 Cre-Chr9:5436441 Cre11g0535 Cre-Chr11:2351729 5.20E-184 dispersed
Cre10g1091 Cre-Chr10:21538101 Cre11g0535 Cre-Chr11:2351729 2.40E-249 dispersed
Cre10g1582 Cre-Chr10:29861172 Cre11g0535 Cre-Chr11:2351729 3.20E-186 dispersed
Cre11g0535 Cre-Chr11:2351729 Cre10g1217 Cre-Chr10:24847580 2.50E-190 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0535 K03549 - csv:101202804 1517.67