Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre11g0551 | ATGTCCCAATGCTTCAAGAAGAACTCAACTGTAAAGCCATCCAGACCGGGGAGGGGAATACTGAATGATGGAAGAGTAATTGCTGTAAAGCAACTATCTGTAAAATCTGACCAAGGAAGGAACCAGTTTGGCCACAATCGTCTCCTTGTTTATGAGTACCTGGAGAAAGGGAGTCTGGACCAAGCATTATTTGGAAAAAGAAACTTCACTCTTGATTGGCCGAAACGATTTTATATGTGCTTGGGCGTGGCGAGAGGTCTGACTTATCTTCATGAGGAATCAAGGCTTCGAATTGTTCATAGAGATGTTAACGCCAGTAACATTCTACTTGATGCTGATCTGAACCCCAAAATTTCAGATTTTGGTTTAGCAAAACTTTATGATGACAAAAAGACTCATATTAGCACCCTTGTTGCTGGGACAATTGGATATCTTGCACCCGAGTATGCCATGCGTGGCCATCTGACTGAGAAGGCTGATGTTTTTAGTTTTGGCGTTGTGGCACTTGAAATTGTCAGTGGTAGGCCAAATTCAGACCGAAGCTTGGAGGACAATGTTTTTCTTCTTGAATTGGCTTGGTACCTCTATGAAAACAATCGTGAAATCGAGTTGCTGGATTCGGATTTGTCGACATTCAATGAGGACGAAGTAAAGCGAGTGATCAGAGTAGGTCTTATGTGCACTCAAACATGCCCAGCTCGGCGGCCATCAATGTCACGGGTGGTGGCAATGTTGTGTGGAGATACTGAAGTGGCTGCTATTACTTCAAAGCCAGGATACTTAACTGAATGGACCTTCGATGACGTAGTCACTTCTGCAAATGATACAACTATAGAAGGATCCAGCACTACCCATGAAGGCTCTTCAAGTTTTAGCATCCATGCTAACTATTCAACCTCTTCAAATTAA | 909 | 43.01 | MSQCFKKNSTVKPSRPGRGILNDGRVIAVKQLSVKSDQGRNQFGHNRLLVYEYLEKGSLDQALFGKRNFTLDWPKRFYMCLGVARGLTYLHEESRLRIVHRDVNASNILLDADLNPKISDFGLAKLYDDKKTHISTLVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSDRSLEDNVFLLELAWYLYENNREIELLDSDLSTFNEDEVKRVIRVGLMCTQTCPARRPSMSRVVAMLCGDTEVAAITSKPGYLTEWTFDDVVTSANDTTIEGSSTTHEGSSSFSIHANYSTSSN | 302 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 2535035 | 2541986 | - | CrPI670011_11g005510.1 | Cre11g0551 | 512296 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre11g0551 | 302 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 44 | 281 | IPR052059 | GO:0004674(PANTHER)|GO:0006468(PANTHER) | |
| Cre11g0551 | 302 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 54 | 257 | - | - | |
| Cre11g0551 | 302 | ProSiteProfiles | Protein kinase domain profile. | 1 | 251 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cre11g0551 | 302 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 263 | IPR011009 | - | |
| Cre11g0551 | 302 | Pfam | Protein tyrosine and serine/threonine kinase | 46 | 244 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cre11g0551 | 302 | Gene3D | Transferase(Phosphotransferase) domain 1 | 54 | 257 | - | - | |
| Cre11g0551 | 302 | MobiDBLite | consensus disorder prediction | 277 | 302 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre11g0551 | Cre-Chr11:2535035 | Cre11g2138 | Cre-Chr11:33088320 | 4.50E-70 | dispersed | |
| Cre11g0551 | Cre-Chr11:2535035 | Cre11g2136 | Cre-Chr11:33047180 | 5.50E-68 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 64517 | PF07714 | PK_Tyr_Ser-Thr | 4.30E-31 | CL0016 | Cre | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre11g0551 | - | - | - | 0.0 |