Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0556 | ATGTTCGCTTTGGGAAATTCAGCATCGAGCTACAAAACCCTACTCCACTTCCCAACTTCATCGCCTCCCACTGCCTCTCGTGCTTCTGCCACTACGCTACCCCTCCCAGATCTGAAACCAGACCGTGGAGCATTTCTCCCTTCAGCCATGGCACTGGTCTTACACGCAGGAAAGACAAATAAAAATTCTTTCAAGGCTCTCATTGCTGCAGAATACAATGGAGTCGAAGCGAAATTGGTCCCAGACTTTGAGATGGGAGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTCCCTGTATTAGAAACGCCCGATGGCCCCATATTCGAGAGTAACGCTATAGCCCGTTATGTTTCTCGCTTGAAGGCTGATAGTCCTCTCTATGGTTCATCTCTGATAGATTATGGACATATTGAACAATGGATTGATTTTGCAACATTGGAGATAGATTCTAATATTTTGACTTGGTTTAGACCTAGAATGGGGAGAGCTGTTTATCTTCCTCCTGTCGAGGAAGCTGCAATTGCTGCATTGAAGAGAGCTTTGGGAGCTTTGAATACACACCTGGCTTCAAATACATACCTAGTTGGTCATTCTGTTACATTAGCTGACATAATCTTGACTTGCAACCTGTTCTTGGGTTTTACTAAGCTCATGACTAAGAGCTTTTCCTCGGAGTTCCCACATGTTGAGCGGTACTTCTGGACCTTGGTCAATCAGCCAAACTTCAAAAAAATCTTGGGTGAGGTGAAGCAGGCAGAGTCAGTTCTTCCTGTTCAATCTGTAAAGAAACCTGATGAATCTTCTAAGCAAAAGCACACGGATGAGAGTAAGAAAGAACCTAAAAAGGAAGCTGAAAAAGAGAAGCCAAAGGCTGTAGCTGGTGAGGGAGAGGATGAGGCACCAAAGCCAAAACCAAAAAATCCTCTTGATTTGCTACCTCCCAGTAAGATGATTCTGGATGAGTGGAAGCGGCTATACTCGAATACCAAAACCAACTTTCGGGAGGTTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGATATTCTCTTTGGTTCTGTGAATACAAGTACAACGATGAGAATACTGTTTCATTCGTGACTTTGAACAAGGTTGGTGGCTTCCTCCAGCGAATGGATCTCGCTCGTAAGTATGCTTTTGGGAAGATGTTAGTGATTGGATCAGAACCTCCATTTAAGGTGAAGGGTCTATGGCTTTTCCGTGGACAAGAGATACCCAAATTCGTCTTGGACGAGTGCTACGACATGGAACTTTATGAATGGAGGAAGGTTGATATATCAGATGAGGCACAAAAGGAACGCGTAAACCAGATGATTGAAGATCAGGAGCCTTTTGAAGGGGAGGCTTTGTTGGATGCCAAATGCTTCAAGTGA | 1416 | 44.21 | MFALGNSASSYKTLLHFPTSSPPTASRASATTLPLPDLKPDRGAFLPSAMALVLHAGKTNKNSFKALIAAEYNGVEAKLVPDFEMGVSNKTPEFIKMNPIGKVPVLETPDGPIFESNAIARYVSRLKADSPLYGSSLIDYGHIEQWIDFATLEIDSNILTWFRPRMGRAVYLPPVEEAAIAALKRALGALNTHLASNTYLVGHSVTLADIILTCNLFLGFTKLMTKSFSSEFPHVERYFWTLVNQPNFKKILGEVKQAESVLPVQSVKKPDESSKQKHTDESKKEPKKEAEKEKPKAVAGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVLDECYDMELYEWRKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK | 471 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2587283 | 2589962 | - | CrPI670011_11g005560.1 | Cre11g0556 | 512301 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0556 | 471 | SUPERFAMILY | GST C-terminal domain-like | 131 | 263 | IPR036282 | - | |
Cre11g0556 | 471 | FunFam | Elongation factor 1-gamma 1 | 311 | 471 | - | - | |
Cre11g0556 | 471 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 136 | 264 | IPR010987 | - | |
Cre11g0556 | 471 | MobiDBLite | consensus disorder prediction | 263 | 318 | - | - | |
Cre11g0556 | 471 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 50 | 471 | IPR044628 | GO:0004364(InterPro) | |
Cre11g0556 | 471 | Gene3D | Glutaredoxin | 49 | 123 | - | - | |
Cre11g0556 | 471 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 50 | 131 | IPR004045 | - | |
Cre11g0556 | 471 | SFLD | Glutathione Transferase (cytosolic) | 53 | 239 | IPR040079 | - | |
Cre11g0556 | 471 | FunFam | Elongation factor 1 gamma | 129 | 265 | - | - | |
Cre11g0556 | 471 | Gene3D | - | 129 | 266 | - | - | |
Cre11g0556 | 471 | Pfam | Glutathione S-transferase, C-terminal domain | 175 | 246 | IPR004046 | - | |
Cre11g0556 | 471 | CDD | GST_C_EF1Bgamma_like | 139 | 259 | - | - | |
Cre11g0556 | 471 | SUPERFAMILY | Thioredoxin-like | 49 | 134 | IPR036249 | - | |
Cre11g0556 | 471 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 311 | 471 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cre11g0556 | 471 | MobiDBLite | consensus disorder prediction | 270 | 311 | - | - | |
Cre11g0556 | 471 | FunFam | Elongation factor 1B gamma | 50 | 123 | - | - | |
Cre11g0556 | 471 | Pfam | Elongation factor 1 gamma, conserved domain | 310 | 418 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cre11g0556 | 471 | Pfam | Glutathione S-transferase, N-terminal domain | 59 | 125 | IPR004045 | - | |
Cre11g0556 | 471 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 311 | 471 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cre11g0556 | 471 | CDD | GST_N_EF1Bgamma | 52 | 126 | - | - | |
Cre11g0556 | 471 | SMART | EF1G_2 | 310 | 418 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cre11g0556 | 471 | SFLD | Main (cytGST) | 53 | 239 | - | - | |
Cre11g0556 | 471 | SUPERFAMILY | eEF1-gamma domain | 311 | 471 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre10g0906 | Cre-Chr10:10469490 | Cre11g0556 | Cre-Chr11:2587283 | 5.90E-182 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0556 | K03233 | - | rcu:8263260 | 710.294 |