Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0557 ATGGGTTGCATTTGCTCGAAGGGAATTCCAGCTAACGACTATGTTGCTGAGAATCATTCCAAAGAGAGGCATTTGAAGTCTAATAGATCTTCCAGACATGGGGCTTCATTGAGGAAAGAAGAATCCGTGTTACATTCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATATTGAACCAACATGGGGAAGAGAATGCTGGATCAACATCTGAATCGGATGATGCTGAGAAGGCAACACCCATTGGAAAAGCTGCCGGTGCCAAGCCACTGCGTCAAGAACAACGGCCAAGTATGGAGGATGGAGAAAAGAGAGTAGGAGTACATAACAATAATAATAATGCAACACCTAGAATAATCGGTGTTGTAATTGGGGAAAAGGGGGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGACATCTGTGGCTGGAGAAGCAATCAATGGATGGGTTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCGTGATATTGAAACAAACAAGATTGTTGCATTGAAGAAGGTGCGATTTGCTAACATGGATCCTGAAAGTGTTCGTTTTATGGCCAGGGAAATTCTTATCCTACGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATCACTTCAAGGGTATCGGGCAGTTTATACCTCATATTTGAGTATATGGAACATGATCTTGCAGGGTTGGTAGCAACCCCAGGGATCAAGTTCACTGAAGCACAGATAAAATGCTATATGAAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCGCAGGGAGTTTTGCACCGTGACATCAAGGGCTCAAATCTTCTGATTGACAATAATGGTAATCTAAAGATAGGTGATTTTGGGCTATCAACATTTTTCCGTTCCCGGCAAAAGCAGCCTCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCACCTGAGCTTTTGCTTGGTGCAACGGACTATGGAGTTTCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAACTGTATGCTGGAAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACACAAGATCTTCAAACTCTGTGGCTCCCCGTCTGAAGAATACTGGAAAAAGTCAAAATTACCTCATGCCACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTTCCTTTCTCTGCATTGGCCCTTTTGGATGTCCTTCTCGCGGTGGAACCTGATGGCCGTGGAACAGCGTCCTCTGCCCTTCAAAGTGAGTTCTTTACCACTGAACCGCTTCCCTCGGATCCCTCTGCTTTGCCAAAGTACCCACCTTGCAAGGAGTTTGATGTAAAGCTTCGAGATGAGGAATCTCGAAGAAGAAGAGCTCCTATCTGCGTTGCACGTGAACATGAAGCAGCTCGTAAATTTTCCCGAGAATCAAAAGCAATTCCTGCACCAGATGCGAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGGCAGCAGAATCCTACAAGTGTCAGTGAAAAGTATAATCATGAAGAGGACGGTGGCTCTGGCTTTTGCATCGGCCCCCCAAGAGAAGCAACGCAAATGCAGCCAACTGCATTGGGTTCTTCACGATACATGAACGGGAGTCAGGGTGATAATCTAAGAGGTTCTTCAGTTGGGGCAAAAGGTGCAGAACTTAGAAAACAGAGATCTTTTATGCAGCATGGTGCTGGACAGTTATCTCGGTATTCCAATTCTGTTGCAGTTCGAGGTGGTTCACGATTTGGCTGTGGTGGAGAAAGTAGTGCTAATTCACACTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGCGACTCTTCAGAAAAGCATGAATGGTCTCACCATTTACTAGACAGGCCAAAATCTTCATATAAGATAGATAATCAATCAGCTGGAAAAGAGTCTACTATGAGTTATGCTCCGAAGAAGAGAATTCACTACTCAGGACCATTGATGCCTCCCGGGGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTGCGCAAGGCTCGTATTGACAAAGCTAAGACAAAAAAGACGTACGACGACAAAGGTCAGATGGAATCATTGCTTCACCATGCGAGAAATGGCAATTGA 2208 45.06 MGCICSKGIPANDYVAENHSKERHLKSNRSSRHGASLRKEESVLHSDGGQSDAMARLILNQHGEENAGSTSESDDAEKATPIGKAAGAKPLRQEQRPSMEDGEKRVGVHNNNNNATPRIIGVVIGEKGALVIAGWPSWLTSVAGEAINGWVPRKADSFQKLDKIGQGTYSSVYRARDIETNKIVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLVATPGIKFTEAQIKCYMKQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPFSALALLDVLLAVEPDGRGTASSALQSEFFTTEPLPSDPSALPKYPPCKEFDVKLRDEESRRRRAPICVAREHEAARKFSRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNHEEDGGSGFCIGPPREATQMQPTALGSSRYMNGSQGDNLRGSSVGAKGAELRKQRSFMQHGAGQLSRYSNSVAVRGGSRFGCGGESSANSHWPEECFNVSYNHFNGGDSSEKHEWSHHLLDRPKSSYKIDNQSAGKESTMSYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTKKTYDDKGQMESLLHHARNGN 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2596343 2608028 + CrPI670011_11g005570.1 Cre11g0557 512302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0557 735 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Cre11g0557 735 MobiDBLite consensus disorder prediction 510 524 - -
Cre11g0557 735 Pfam Protein kinase domain 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0557 735 MobiDBLite consensus disorder prediction 18 112 - -
Cre11g0557 735 ProSiteProfiles Protein kinase domain profile. 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0557 735 MobiDBLite consensus disorder prediction 705 735 - -
Cre11g0557 735 FunFam probable serine/threonine-protein kinase At1g54610 145 240 - -
Cre11g0557 735 Coils Coil 686 706 - -
Cre11g0557 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0557 735 SMART serkin_6 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0557 735 MobiDBLite consensus disorder prediction 510 542 - -
Cre11g0557 735 MobiDBLite consensus disorder prediction 705 727 - -
Cre11g0557 735 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524(InterPro)
Cre11g0557 735 SUPERFAMILY Protein kinase-like (PK-like) 152 449 IPR011009 -
Cre11g0557 735 PANTHER CELL DIVISION PROTEIN KINASE 157 442 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cre11g0557 735 Gene3D Transferase(Phosphotransferase) domain 1 241 481 - -
Cre11g0557 735 FunFam probable serine/threonine-protein kinase At1g54610 241 481 - -
Cre11g0557 735 CDD STKc_CDK9_like 158 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0379 Cre-Chr4:13084484 Cre11g0557 Cre-Chr11:2596343 2.50E-52 dispersed
Cre05g1117 Cre-Chr5:10515345 Cre11g0557 Cre-Chr11:2596343 1.20E-193 dispersed
Cre08g0070 Cre-Chr8:1516257 Cre11g0557 Cre-Chr11:2596343 1.70E-194 dispersed
Cre08g0267 Cre-Chr8:7173931 Cre11g0557 Cre-Chr11:2596343 2.30E-118 dispersed
Cre10g1554 Cre-Chr10:29524189 Cre11g0557 Cre-Chr11:2596343 8.50E-96 dispersed
Cre11g0557 Cre-Chr11:2596343 Cre11g0944 Cre-Chr11:6755157 6.50E-147 dispersed
Cre11g0557 Cre-Chr11:2596343 Cre05g0708 Cre-Chr5:6258340 1.70E-171 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64519 PF00069 Pkinase 3.30E-68 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0557 - - - 0.0