Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0589 ATGGCAATGACTCGAGTAATCCTCGTTGTTACGTTGTCGTTGTTGCTTTTCGGTATAGCTTGTGATGCCCAACTTTCTTCTACATTTTACGATCAAACTTGTCCTACTGCACTCAATACTATTAGAACTGTTGTTAGGCAAGCAGTTTCTCAAGAGCGTCGAATGGCTGCATCTCTTATTCGCCTCCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGCATCGATATTGCTTGATGATACTCCTTCCATGATTGGTGAACAAAATGCAGCTCCAAACAGAAACTCTGCAAGAGGTTATGGGGTGATACACAAGGCTAAGACTGAAGTTGAGAAGATATGTCCTGGTGTTGTATCTTGTGCAGATATTCTTACTGTGGCTGCAAGGGATGCATCTTTTGCTGTCGGAGGTCCATCTTGGACAGTGAAACTTGGAAGACGAGATTCTACCACCGCAAGTAAAACTCTAGCAGAAAGCGAGCTACCAGGCTTCCAAGAAAGCCTCGACAAACTTATATCCATTTTTGAGAACAAAGGTCTTAGTGCTAGAGACATGGTTGCACTTTCAGGTTCTCACACCATAGGACAAGCCCAATGCTTTCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGACACAGGATTTGCTAGTACTCGTCGTAGAAATTGTCCTACAACTGGTGGTAATGGAAATTTGGCACCACTTGATTTGGTTACACCTAACTCCTTTGACAATAACTACTTCAAAAATCTTGTGCAAAAGAAGGGATTGCTTGAAACAGATCAAGTTCTCTTTAATGGAGGATCAACAGATAGTATTGTCACAGAGTATAGTAGGAATCCCACTACATTCAAATCAGATTTTGCAACTGCAATGATAAAAATGGGAGACATTCAACCTCTTATTGGAGTAGAAGGACAAATAAGAAAGATATGTGGTGCAGTGAACTAA 954 40.57 MAMTRVILVVTLSLLLFGIACDAQLSSTFYDQTCPTALNTIRTVVRQAVSQERRMAASLIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPNRNSARGYGVIHKAKTEVEKICPGVVSCADILTVAARDASFAVGGPSWTVKLGRRDSTTASKTLAESELPGFQESLDKLISIFENKGLSARDMVALSGSHTIGQAQCFLFRNRIYNQSNIDTGFASTRRRNCPTTGGNGNLAPLDLVTPNSFDNNYFKNLVQKKGLLETDQVLFNGGSTDSIVTEYSRNPTTFKSDFATAMIKMGDIQPLIGVEGQIRKICGAVN 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2992064 2993214 - CrPI670011_11g005890.1 Cre11g0589 512334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0589 317 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cre11g0589 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cre11g0589 317 FunFam Peroxidase 162 296 - -
Cre11g0589 317 CDD secretory_peroxidase 24 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre11g0589 317 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 ProSiteProfiles Plant heme peroxidase family profile. 24 317 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 FunFam Peroxidase 28 178 - -
Cre11g0589 317 Gene3D Peroxidase, domain 2 162 296 - -
Cre11g0589 317 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Cre11g0589 317 PANTHER PEROXIDASE 72-RELATED 10 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 Gene3D - 28 313 - -
Cre11g0589 317 Pfam Peroxidase 41 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g0589 317 SUPERFAMILY Heme-dependent peroxidases 24 317 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g1538 Cre-Chr9:31132415 Cre11g0589 Cre-Chr11:2992064 1.00E-59 dispersed
Cre11g0563 Cre-Chr11:2663100 Cre11g0589 Cre-Chr11:2992064 2.70E-158 dispersed
Cre11g0589 Cre-Chr11:2992064 Cre11g1063 Cre-Chr11:8063455 1.10E-106 dispersed
Cre11g0588 Cre-Chr11:2986905 Cre11g0589 Cre-Chr11:2992064 2.70E-144 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0589 K00430 - csv:116403994 556.599