Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0591 ATGCCCATTTCAAGGCTTTGCCTATTTCTCGCCTTCTTTCCGCTGTTTCTTTCACCCCTTTCCGCCGCCGCCGCCGCCGCCGATGACCGGAGCTTCCTCCTCCTCCGCCACCACCGCCACCTCCTCCACCAACCCTTTTTCCCATGGACTTCTTTACCTCCATCTCAAGCTCCATCTTCTCTTTCTCCCTTGCCTCAACCACAGCACCAACAGCCTAAACTCCCCTTTTCTTCTACTTCATTTTCCTCGCCCCCTAAACCCTTTTTTCCATCCTACCCTTCGTCGCCGCCGCCGCCTCCGTCGCCTCCTTTGACGGCGCTCCCTACATTTCCGGCCAACATTTCTGCTCTTCTCTTTCCGCAACCTACTTCTTCTTCCCAACACCTCCACCGCCATGTCTTTGCCATTGTCATCTCTGTTTCTCTTGTCTTCTCTGTTCTTGTTTTTCTCGTTGCTCTGTACTATTACTTTCGAAAGCGGAACCGACAAATCTCTGCTACCGATAAGGCCTCGAGAACTGATAATCTCCGGCTGTATCCGCCGGATATTGACACTTCTGATGGAGTTAACAAACACAGAACCTCCTCCACCACCAGCTCCAAATTTCTTTATCTTGGGACTTTGGCTACTTCTCGAGAGATTGATGAGGAGGCCGCCGGAAATGTGGAGGACGGTGGCGGCGGGATCGTGGAGTCTGTTTCTCCGGTGAAAATGGGGTCGCCGGAGCTGAAGCCCCTTCCACCGCTTCCTCGCCGGAATTTCGCCGAAGATTATCAGAGGAATGTTGATAGTAATGACAACGATGATGACGAAGAAGATCGCGACGATGAAGAGTTCTTTTCGCCAAGAGGGTCTTCTGTCGGCGGGAAGGATAATGTGGGGAGTAATAGAAGATTGAGCCCTGTGAAGTTGTTTCATAATGTGGAAACTGAAAATTTCTTGAGGAAAAGCTATAATTCTAGTTTGAATTCTGGTTCTCCCTCTGTTTCTGTTCCCAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACGAGTTTGAGATCGAAGTCGCCTGACTCCATTATCAGATTCCCTGTTCCTTTACGGCCATTGCCAACACTTCCGGTACCGCCATCACCGTCGTTGTCCTCTGCTTCTTCACCACTGGGAGGTTCAGGGAACACCAAGAACTCGCCGTCGAGAGATTCCGATTTGTCAGAGCTGCATCGGCAGTGTTCAAATGGTTTTAGGATGGATTACCAGCAACCATTACCGGTAAAACTACCACCACCCCGGCCACCACCACCGCCACCACCTCCTCCAATGTTTTGGGAGATTCCTCAATCTTCCTCTCTTCTCAACAAGGAACCAAATCTAGGTCCACCGGTACTCACCGTGCCATCGAGACCGATACTCTCACAGAACATAGCTCATATGTCAGCAGGGGAGCAGTCAAACACCATTGGAGATGCAGAGAGAATGGAAGAAAATTCGAAGCCGAAACTGAAGGCCTTGCATTGGGACAAAGTTCGGACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAGTCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTGAATAACAATAATTCAAGTCTGATGAGCAAGGAAAATGGTAGTGTTCGTCAAAACATGCCTTTAGGGAGCCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGAAATTCAGATACTTTGTGCACTGAACTGCTAGAAAGTTTACTAAAAATGGCTCCGACCGAAGAAGAAGAACGTAATTTGAAAGAATACAAAGATGATTCACCTTTTAAACTTGGCCCAGCTGAGAAATTCCTCAAGGTAGTTCTCGATGTACCATTTGCATTCAAAAGGGTGGATGCAATGCTTTACATTGCTAATTTCGAATCTGAGGTCGAGTACCTCAATCGGTCCTTTGAAACTCTTGAGGCTGCTTGTATAGAATTGAAGAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACTGGGAACCGGATGAATGTAGGCACGAACCGAGGCGATGCACATGCTTTTAAACTCGACACCCTTCTGAAGCTTGTCGATATCAAGGGCACTGATGGAAAGACCACTCTCTTGCATTTCGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACACTCCACCTCTGACCTCAACATGACAGCTGATAAAACTCAACAATCTTCCTTAACAAATGACGTCGAGTTTCGGAAGCTTGGTCTTCAAGTCGTTTCAGGTCTTAGTAGGGAGCTATCCAATGTGAAGAAAGCTGCATTAATGGATGCAGATGTGCTTAGCAACGACGTAGGGAAACTCGCTGGAGGGATCACAAAAATCACTGAGGTCATTAGATTAAATGAAGACATGTCGAAAGGAGGGAGTAAGTCAAATTTCTCGGACTCCATGAACAGGTTCTTGGGGAGGGCAGCTGAAGAAGTAGCAAGGGTACAAGTCAAAGAGGGCATTGTCCTCTCCATGGTAAAGGAAATAACCGAATACTTTCATGGAAACTTAGCGAAAGAAGAAGCTCGGCCGCTGCGTATATTCATGGTGGTAAAGGATTTTCTTGCAATCTTAGATCAGGTATGCAAAGAAGTTGGAAGAATCAATGAAAGAACAATAGTTGGTTCGGCTCGTCAATTTACGGGCCCTCCGAATCCATGTCTTCCATCGATTTTCCCTGGATTATGCGAAAGTCAGCGCTATGGTTCCTCTGATGATGATAGCTCATCTTCCTCATCTTAG 2847 46.93 MPISRLCLFLAFFPLFLSPLSAAAAAADDRSFLLLRHHRHLLHQPFFPWTSLPPSQAPSSLSPLPQPQHQQPKLPFSSTSFSSPPKPFFPSYPSSPPPPPSPPLTALPTFPANISALLFPQPTSSSQHLHRHVFAIVISVSLVFSVLVFLVALYYYFRKRNRQISATDKASRTDNLRLYPPDIDTSDGVNKHRTSSTTSSKFLYLGTLATSREIDEEAAGNVEDGGGGIVESVSPVKMGSPELKPLPPLPRRNFAEDYQRNVDSNDNDDDEEDRDDEEFFSPRGSSVGGKDNVGSNRRLSPVKLFHNVETENFLRKSYNSSLNSGSPSVSVPNSPSPPLMLSPTSLRSKSPDSIIRFPVPLRPLPTLPVPPSPSLSSASSPLGGSGNTKNSPSRDSDLSELHRQCSNGFRMDYQQPLPVKLPPPRPPPPPPPPPMFWEIPQSSSLLNKEPNLGPPVLTVPSRPILSQNIAHMSAGEQSNTIGDAERMEENSKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNNNSSLMSKENGSVRQNMPLGSQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLCTELLESLLKMAPTEEEERNLKEYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYIANFESEVEYLNRSFETLEAACIELKNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDLNMTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLSNDVGKLAGGITKITEVIRLNEDMSKGGSKSNFSDSMNRFLGRAAEEVARVQVKEGIVLSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLAILDQVCKEVGRINERTIVGSARQFTGPPNPCLPSIFPGLCESQRYGSSDDDSSSSSS 948
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3007334 3011580 - CrPI670011_11g005910.1 Cre11g0591 512336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0591 948 PANTHER FORMIN-RELATED 40 942 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cre11g0591 948 Gene3D Formin, FH2 domain 484 903 IPR042201 -
Cre11g0591 948 ProSiteProfiles Formin homology-2 (FH2) domain profile. 485 919 IPR015425 -
Cre11g0591 948 MobiDBLite consensus disorder prediction 376 394 - -
Cre11g0591 948 MobiDBLite consensus disorder prediction 217 298 - -
Cre11g0591 948 MobiDBLite consensus disorder prediction 413 435 - -
Cre11g0591 948 MobiDBLite consensus disorder prediction 57 85 - -
Cre11g0591 948 Pfam Formin Homology 2 Domain 488 893 IPR015425 -
Cre11g0591 948 SMART it6_source 485 908 IPR015425 -
Cre11g0591 948 MobiDBLite consensus disorder prediction 368 399 - -
Cre11g0591 948 MobiDBLite consensus disorder prediction 86 105 - -
Cre11g0591 948 Coils Coil 655 675 - -
Cre11g0591 948 MobiDBLite consensus disorder prediction 57 105 - -
Cre11g0591 948 MobiDBLite consensus disorder prediction 319 350 - -
Cre11g0591 948 MobiDBLite consensus disorder prediction 417 435 - -
Cre11g0591 948 SUPERFAMILY Formin homology 2 domain (FH2 domain) 422 906 - -
Cre11g0591 948 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1973 Cre-Chr3:36749257 Cre11g0591 Cre-Chr11:3007334 8.80E-106 dispersed
Cre07g0601 Cre-Chr7:3841222 Cre11g0591 Cre-Chr11:3007334 4.10E-166 dispersed
Cre08g0831 Cre-Chr8:21398118 Cre11g0591 Cre-Chr11:3007334 2.00E-68 dispersed
Cre10g0719 Cre-Chr10:6941951 Cre11g0591 Cre-Chr11:3007334 1.30E-16 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0591 K28090 - csv:101213912 1369.76