Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0620 ATGGGGGACGAGGAGCATAATGGGAATGGGAGTAGCCGGTTGGCGCCGCCGCGGGGTCCAGCGGAGCACTGTGTGGAAATTGTTCATCCGGTGGTTCCGCCGCCGAGGAGAAGCTGGATACAGAAGCTGCGCAACCGGCTGAAGGAAATATTTTTTCCGGACGATCCTCTCCGGCAGTTCAAAGGGCAGTCTCCGGCGAGGAAATGGGTGATTGGAGGTCAATATATATTCCCAATTCTTCAATGGGGGCCTCACTATAATCTTAGCCTTTTTAAATCTGATGTTGTTGCTGGTCTCACCATTGCTAGCTTGGCCATACCTCAGGGTATTAGCTATGCTAAGCTTGCTAATTTGCCTCCCATTGTTGGACTTTATTCAAGCTTTGTTCCACCACTAGTATATGCTGTTCTTGGAAGCTCAAGAGATCTAGCAGTTGGACCTGTTTCAATAGCATCACTAATATTGGGTTCCATGCTGAGGCAACAAGTTTCTCCCATCAAAGATCCCATTCTTTTTCTTCAGCTCGGCTTCACTTCTACCTTATTCGCGGGTCTCTTCCAAGCTTCGCTCGGGTTTCTCAGACTTGGTTTTATAATAGATTTTTTATCGAAGGCGACTTTGATTGGATTCATGGCAGGAGCAGCCATTATTGTGTCTTTGCAACAACTTAAAGGGTTGCTTGGAATAACCCATTTCACTAAACAGATGGGTTTGATTCCTGTTTTGTCCTCAGTTTTTCATCACACTCATGAGTGGTCATGGCAGACTATACTGATGGGCTTTTGTTTCCTTCTCTTTCTTCTCCTCACAAGGCACATTAGCATGAAAAAGCCAAAATTGTTCTGGGTGTCAGCTGGAGCTCCTTTGGTGTCCGTCATTCTTTCAACCATTTTGGTCTTTGCATTCAAGGCGGATCGCCATGGCATCACTGTTATAGGAAAGTTGCAAGAAGGATTGAACCCACCTTCATGGAACATGCTTCGATTTGAAGGGTCACACCTTGGCCTTGTTATTAAGACTGGACTCGTCACCGGCATCATCTCTCTCACTGAAGGAATCGCAGTAGGGCGAACTTTTGCAGCTATAAAAGACTACCGCGTCGATGGTAACAAGGAAATGATTGCAATCGGCCTCATGAATGTCGTCGGCTCTTTCACTTCTTGCTATATCACAACAGGTGCATTTTCAAGGTCAGCGGTGAACCATAATGCGGGAGCAAAGACCGCAGTGTCGAACATCATAATGTCAGTGACGATAATGGTGACGTTGTTGTTTCTGATGCCTCTGTTTCAGTATACACCCAATCTGGTGTTGGCTGCCATCATCGTCACCGCCGTTGTCGGCCTTATCGACATCCCGGCCGCCTATGGCATTTGGAAGGTCGACAAGTTCGATTTCGTTGTGATGCTTTGTGCCTTCTTCGGCGTCATTCTCATCTCTGTTCAACATGGCCTCGCCATTGCTGTTGGCATATCAATTTTCAAGATCATCCTACAAATCACAAGGCCAAAAACAGTGATGTTGGGAAACATAGCTGGAACAGATATATATAGAAACCTTCACCATTACAAGGATGCAATGAGTGTCGAAGGCTTTCTCATTTTAAGCATTGAAGCTCCAATCAACTTTGCCAACACCACATATCTCAATGAAAGGATTTTGAGATGGATCGAAGATTATGAAGCTGATCAAGATCATATTAAGAAGGAGGACTCCAGCCTTCAGTTTGTTGTTTTAGAATTGTCAGCTGTGAGTGCTATAGACACTAGTGGAGTCCTACTCTTCAAAGACTTAAGGAGAGCATTGGAAAAGAAGGGTGTTGAGCTAGTGTTGGTGAACCCATTGGGTGAAGTTTTGGAAAAGTTGCAAAAGGCAGATGAAAATCAAGAGATTTTGAGGCCAAATAATGAAATTACCAAAATGGCACTTACCGCCATGGGAATTGTTCGTATTCTGGATTCGGATCAACTCCACTTCTTTGATTCTCACGGTTATCTTGTGATTGAATCATTCGCCACTCCTGATGAAATTCATGCCATGAGAAGCAGAATGGAGCAGTTGCTTCATGAATTTGACTGCTCCAGTTCCTCTGTTTTCTCTACTGTAAATCAGCAGCAGTTGACCGACGATTACTTCCTCGAAAGCGCCGAGAATATTTCCTTCTTTTTTGAGGAAAAAGCATTTCGAGAGGATGGAAACTTGAAACAAGCAAAGGAGCTCTCAATTAACAAAGTTGGTCATGCATTGCATGAGCTTGATCCAGTTTTCAAAAGCTTCTCCAACTCTGAGAAGTTTTCAGGTTTATTGTTGTCCTTAGGATACAAGAGGCCGATACCCATTCAGTCCATGTACATATTTAAGCAACCAGGTATTGGAGGTGAAGTAGTGCCTCACCAGGATAACTCATTTCTTTACACCGAACCAACTACATGCACAGGGCTGTGGCTGGCACTTGAAGATGCAAATACAACAAATGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAATGGACTTGTTAGAAGGTTTCTTAGAGGAGACAAAGGGGTGTACTTTGATCAACCTTCTCCAGCTTATGAAAAGAAAGATTTTGTGCCTATTGAAGTGAAAGCTGGATCTTTGGTTGTTATTCATGGAGACCTTATTCATCAAAGCTTTGAGAATCAGTCTCCAAAATCAAGACATGCGTATAGCGTGCACGTGGTTGATACAGAAGGTTGCGTATGGGCTCAAGATAATTGGATGAGGAGAAAAGTGCAGCCAGAGCCTCTATATGAACCTTGA 2784 44.04 MGDEEHNGNGSSRLAPPRGPAEHCVEIVHPVVPPPRRSWIQKLRNRLKEIFFPDDPLRQFKGQSPARKWVIGGQYIFPILQWGPHYNLSLFKSDVVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQQVSPIKDPILFLQLGFTSTLFAGLFQASLGFLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKGLLGITHFTKQMGLIPVLSSVFHHTHEWSWQTILMGFCFLLFLLLTRHISMKKPKLFWVSAGAPLVSVILSTILVFAFKADRHGITVIGKLQEGLNPPSWNMLRFEGSHLGLVIKTGLVTGIISLTEGIAVGRTFAAIKDYRVDGNKEMIAIGLMNVVGSFTSCYITTGAFSRSAVNHNAGAKTAVSNIIMSVTIMVTLLFLMPLFQYTPNLVLAAIIVTAVVGLIDIPAAYGIWKVDKFDFVVMLCAFFGVILISVQHGLAIAVGISIFKIILQITRPKTVMLGNIAGTDIYRNLHHYKDAMSVEGFLILSIEAPINFANTTYLNERILRWIEDYEADQDHIKKEDSSLQFVVLELSAVSAIDTSGVLLFKDLRRALEKKGVELVLVNPLGEVLEKLQKADENQEILRPNNEITKMALTAMGIVRILDSDQLHFFDSHGYLVIESFATPDEIHAMRSRMEQLLHEFDCSSSSVFSTVNQQQLTDDYFLESAENISFFFEEKAFREDGNLKQAKELSINKVGHALHELDPVFKSFSNSEKFSGLLLSLGYKRPIPIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPAYEKKDFVPIEVKAGSLVVIHGDLIHQSFENQSPKSRHAYSVHVVDTEGCVWAQDNWMRRKVQPEPLYEP 927
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3312001 3331021 - CrPI670011_11g006200.1 Cre11g0620 512365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0620 927 Pfam Sulfate permease family 91 471 IPR011547 GO:0016020(InterPro)
Cre11g0620 927 Pfam Phytanoyl-CoA dioxygenase (PhyH) 660 896 IPR008775 -
Cre11g0620 927 ProSiteProfiles STAS domain profile. 522 625 IPR002645 -
Cre11g0620 927 SUPERFAMILY SpoIIaa-like 527 626 IPR036513 -
Cre11g0620 927 CDD STAS_SulP_like_sulfate_transporter 523 626 - -
Cre11g0620 927 Gene3D q2cbj1_9rhob like domain 650 925 - -
Cre11g0620 927 NCBIfam sulfate permease 78 626 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cre11g0620 927 PANTHER SULFATE TRANSPORTER 63 632 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre11g0620 927 SUPERFAMILY Clavaminate synthase-like 652 918 - -
Cre11g0620 927 Pfam STAS domain 525 631 IPR002645 -
Cre11g0620 927 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cre11g0620 927 Gene3D STAS domain 502 645 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0209 Cre-Chr9:2213096 Cre11g0620 Cre-Chr11:3312001 7.40E-227 dispersed
Cre09g1526 Cre-Chr9:30768953 Cre11g0620 Cre-Chr11:3312001 6.70E-172 dispersed
Cre11g0620 Cre-Chr11:3312001 Cre11g1949 Cre-Chr11:31287786 9.20E-183 dispersed
Cre11g0620 Cre-Chr11:3312001 Cre09g0691 Cre-Chr9:6600917 3.00E-205 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0620 K17471 - csv:101219163 1152.5