Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0631 ATGGGCGCTTTTGGAATTGTGTTCTTCTTCCTCCTCCTTGTCGCTGTGTTTCCTTTGTCTTCTCCTTTGTCCGAGAACGAAGCTCTTTTGAAACTCAAACAATCCTTCACCCATTCCGAATCCTTGAATTCTTGGAACTCTGACTCTGTCCCTTGCTCCGCTCGATGGACCGGCATTATCTGTAATAGAGGCGTTATCACCGGCCTACATCTCTCCGGCCTCCAACTCTCCGGAAAAATCGACGTCGAAGCTCTTCTTCAGCTTCGTAGCCTTCGAACCATTAGCTTCGTTAACAACAAATTCTCCGGTCCGATTCCGGAATTCAACAAAATCGGAGTTCTAAAATCTCTTCTCTTAACCGGAAACCACTTCTCCGGCGCTATCCCAAACGATTTCTTCTCTTCCTTAACTTCTTTAAAAAAGGTTTGGCTCTCTTCAAACAATTTCTCCGGTAACATTCCAAATTCTCTAGCTCAACTCTCCCATTTAATCGAACTCCATCTCGAGAGCAACCAATTTTCAGGACCAATCCCAAATCTCAAATACGCTTCAATTATAACATCCCTTGATCTCTCCAACAACAAACTCGAAGGTCAAATTCCCGAAACCCTTTCAAAATTCGACGCAAAAGCATTCGCTGGAAATGAAGGCCTTTGCGGAAACCCACTCCCGAAATCTTGCGGCGAAAACGCTGGACGAATTTCTGAAGAGAAACCCCTTTCTTCACCTTCACCTCCTGGGGAATCGCAAAGCAATGTTTCGAAATTGGTTGTGGCTTCATTGATAGCCGTGGTTGTATTTCTAATGGTGTTTATATTTTTGAGTGCTTCAAAGCGCAGAGAAGATGAGTTCAGTGTATTGGGGAGAGAACAAATGGAGGAAGTTGTGGAGGTTCATGTACCGAGTTCCGGCGGCGGCCATGATAAGCAATCCAGCAGAAGAGGTGGGGATTCTAAGAGAGGATCGCAACAGGGGAAGGCGGGGATGAGCGATCTTGTGGTGGTTAATGAAGATAAAGGGACGTTTGGTTTGGCGGATTTGATGAAGGCTGCGGCGGAGGTTTTAGGGAATGGTGGGTTGGGTTCGGCTTACAAGGCGGTTATGTCCAATGGGTTGTCGGTGGTGGTGAAGAGAATGAGAGAGATGAATAAATTAGGGAAAGATGGGTTCGATGCGGAGATGAGACGACTTGGAAGATTGCGCCATCAGAATATATTAACGCCTTTGGCTTATCATTACAGGAGAGAGGAGAAATTGCTTGTGTCCGAGTACATTCCAAAGGGTAGCCTCTTGTATGTGTTGCATGGTGATCGTGGAGCCTGCCATGCAGATCTCAATTGGGCCACTCGGTTAAGGATCGTGCAGGGGATTGCAAGGGGACTGGGATTCCTCTATTCAGAATTTGCAACGTATGATCTGCCGCATGGGAATCTGAAATCCAGCAACGTTCTTCTAAGCGACAACTATGAGCCACTTTTGAGCGACTACGCGTTCCATCCCCTTATCAATCCCAACAATGCAACTCAGGCAATGTTCGCTTACAAATCCCCTGAGTATGGTCAATACCAGGAAGTCTCTCCCAAGTCTGATGTTTATTGTCTTGGCATTATCATTCTCGAAATCATGACTAGTAAATTTCCTTCTCAATATCTTACAAATGGCAAGGGTGGTACTGATGTGGTGCAGTGGGTCTCATCTGCAATTTCTGAGAAGAGGGAGGCTGAACTCATTGACCCTGAGATTGCAAACGACACCGGTGCACTCAATCACATGGTCCAGCTTCTCATAATCGGCGCGGATTGCACCCACAATAATCCTCAGCAACGGCCAGAAATGAGGGAAGCCATTAGGAGAATAGAAGAGATATGA 1869 46.23 MGAFGIVFFFLLLVAVFPLSSPLSENEALLKLKQSFTHSESLNSWNSDSVPCSARWTGIICNRGVITGLHLSGLQLSGKIDVEALLQLRSLRTISFVNNKFSGPIPEFNKIGVLKSLLLTGNHFSGAIPNDFFSSLTSLKKVWLSSNNFSGNIPNSLAQLSHLIELHLESNQFSGPIPNLKYASIITSLDLSNNKLEGQIPETLSKFDAKAFAGNEGLCGNPLPKSCGENAGRISEEKPLSSPSPPGESQSNVSKLVVASLIAVVVFLMVFIFLSASKRREDEFSVLGREQMEEVVEVHVPSSGGGHDKQSSRRGGDSKRGSQQGKAGMSDLVVVNEDKGTFGLADLMKAAAEVLGNGGLGSAYKAVMSNGLSVVVKRMREMNKLGKDGFDAEMRRLGRLRHQNILTPLAYHYRREEKLLVSEYIPKGSLLYVLHGDRGACHADLNWATRLRIVQGIARGLGFLYSEFATYDLPHGNLKSSNVLLSDNYEPLLSDYAFHPLINPNNATQAMFAYKSPEYGQYQEVSPKSDVYCLGIIILEIMTSKFPSQYLTNGKGGTDVVQWVSSAISEKREAELIDPEIANDTGALNHMVQLLIIGADCTHNNPQQRPEMREAIRRIEEI 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3497722 3500050 + CrPI670011_11g006310.1 Cre11g0631 512376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0631 622 ProSiteProfiles Protein kinase domain profile. 349 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0631 622 Pfam Leucine Rich Repeat 187 206 IPR001611 GO:0005515(InterPro)
Cre11g0631 622 FunFam Nuclear pore complex protein NUP107 23 179 - -
Cre11g0631 622 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Cre11g0631 622 Gene3D Phosphorylase Kinase; domain 1 317 424 - -
Cre11g0631 622 Gene3D Transferase(Phosphotransferase) domain 1 425 622 - -
Cre11g0631 622 SUPERFAMILY Protein kinase-like (PK-like) 353 618 IPR011009 -
Cre11g0631 622 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 622 IPR046959 -
Cre11g0631 622 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515(InterPro)
Cre11g0631 622 SUPERFAMILY L domain-like 23 206 - -
Cre11g0631 622 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Cre11g0631 622 Pfam Protein kinase domain 353 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0631 622 Gene3D Ribonuclease Inhibitor 183 225 IPR032675 -
Cre11g0631 622 MobiDBLite consensus disorder prediction 298 329 - -
Cre11g0631 622 MobiDBLite consensus disorder prediction 229 249 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1193 Cre-Chr8:25204233 Cre11g0631 Cre-Chr11:3497722 1.20E-98 dispersed
Cre10g2058 Cre-Chr10:35281270 Cre11g0631 Cre-Chr11:3497722 4.60E-70 dispersed
Cre11g0631 Cre-Chr11:3497722 Cre11g0754 Cre-Chr11:4739809 1.10E-67 dispersed
Cre01g1322 Cre-Chr1:26428844 Cre11g0631 Cre-Chr11:3497722 2.40E-33 wgd
Cre11g0631 Cre-Chr11:3497722 Cre05g0980 Cre-Chr5:9047551 2.00E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64521 PF00069 Pkinase 4.00E-25 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0631 K28077 - csv:101215919 1066.6