Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0640 ATGGCGGTGAAGAAAATGAAGTGGAGATCCATTTTCTCCAGCTGCTGCGAGGTTGATTCGCAGTCGTCGGAGGTGATGAAAGTAGTGGCGGCGAATAAGCCGAGTTCCTTCCAAAGGATTTCGAAACTGGATTTGAGTAACCCTAATTCCACTCTATCTGAAGATCTTTCCATCTCTCTCGCCGGATCTGACATCCACGCTTTCACTCTCGCCGAATTGAAGCTCATCTCTCAGACCTTTTCTTCCTCAAACTTCCTTGGAGAAGGTGGATTCGGCCCCGTCTACAAAGGATTCCTCGATGACAATCTCAGGCCTGGCTTGTCTCCTCAGCCCGTCGCTATTAAACTCCTCGATTTGGATGGAACACAAGGCCACAGAGAATGGCTGACGGAGGTGATTTTTCTAGGACAGCTTAAGCACGCTCATCTAGTGAAGCTAATTGGATATTGCTGCGAAGACGAACATAGGATGCTTGTGTATGAGTATATGCCCAGAGGAAGCTTGGAGAATCAACTTTTCAAAAAATATTCGATCCCATTGCCATGGTCGACGAGAATGAAGATCGCTCTTGGAGCTGCCAAAGGTCTGGCCTTCCTCCACGAAGCAGATAAACCAGTCATTTACCGAGATTTCAAAGCCTCCAACATACTGCTCGACTCTGATTATACCGCGAAGCTGTCTGATTTTGGACTAGCCAAAGACGGTCCAGAAGGAGACAACACGCATGTCTCGACCCGAGTAATGGGGACGCATGGATATGCTGCGCCGGAGTATATAATGACGGGTCATTTGACGGCGATGAGTGACGTGTATAGCTTCGGAGTAGTGCTTTTGGAGCTGTTGACAGGGCGGCGGTCGGTGGAGAAGAGCAGTCGTAAGAGGCAGCAGAACTTGGCAGAGTGGGCGAGGCCGATGCTGAATGATCCAAGGAAGCTAAGCCGTATAATAGACCCAAGACTTGAAGGCCAATACTCGGAAATGGGAGCTCAGAAAGCAGCCACATTGGCTTACCAATGCTTGAGCCACCGCCCAAAGCAGAGGCCCACCATGAGCGCCGTCGTCAAGGTATTAGAGCCGCTTAAGGATTTCGATGACATTTCTTCGGGCACCTTCGTTTATACGGTTCTCGCCCAAAACGATCTTCACAACAAACCAACGGGAAATTCAACTTTAGAAGAAGCTAAAAAGTAA 1191 48.95 MAVKKMKWRSIFSSCCEVDSQSSEVMKVVAANKPSSFQRISKLDLSNPNSTLSEDLSISLAGSDIHAFTLAELKLISQTFSSSNFLGEGGFGPVYKGFLDDNLRPGLSPQPVAIKLLDLDGTQGHREWLTEVIFLGQLKHAHLVKLIGYCCEDEHRMLVYEYMPRGSLENQLFKKYSIPLPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDNTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVEKSSRKRQQNLAEWARPMLNDPRKLSRIIDPRLEGQYSEMGAQKAATLAYQCLSHRPKQRPTMSAVVKVLEPLKDFDDISSGTFVYTVLAQNDLHNKPTGNSTLEEAKK 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3552540 3554401 - CrPI670011_11g006400.1 Cre11g0640 512385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0640 396 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0640 396 SUPERFAMILY Protein kinase-like (PK-like) 56 358 IPR011009 -
Cre11g0640 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0640 396 PANTHER OS01G0588500 PROTEIN-RELATED 55 361 IPR050823 -
Cre11g0640 396 FunFam Serine/threonine-protein kinase BIK1 47 162 - -
Cre11g0640 396 FunFam Probable serine/threonine-protein kinase PBL8 163 375 - -
Cre11g0640 396 Gene3D Transferase(Phosphotransferase) domain 1 163 371 - -
Cre11g0640 396 CDD STKc_IRAK 86 360 - -
Cre11g0640 396 Gene3D Phosphorylase Kinase; domain 1 44 162 - -
Cre11g0640 396 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1736 Cre-Chr3:34154283 Cre11g0640 Cre-Chr11:3552540 3.00E-119 dispersed
Cre10g2391 Cre-Chr10:37940700 Cre11g0640 Cre-Chr11:3552540 3.70E-127 dispersed
Cre11g0640 Cre-Chr11:3552540 Cre11g1560 Cre-Chr11:25254329 1.80E-111 dispersed
Cre05g1748 Cre-Chr5:29255370 Cre11g0640 Cre-Chr11:3552540 6.10E-126 transposed
Cre07g1488 Cre-Chr7:30122264 Cre11g0640 Cre-Chr11:3552540 4.70E-126 transposed
Cre11g0640 Cre-Chr11:3552540 Cre03g1778 Cre-Chr3:34629078 9.40E-169 wgd
Cre11g0640 Cre-Chr11:3552540 Cre09g0094 Cre-Chr9:1184326 2.50E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64522 PF07714 PK_Tyr_Ser-Thr 9.90E-48 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0640 - - - 0.0