Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0661 ATGAAGAAGGATAGCTCCATGAATCCTAACTTAACGCTTCTTCTACCTCCGCCCGACGAAGTTTCCTTTGCGTTCATAACCCGGAGCGGTACTTTCACCGATGGCGATTTGCTTGTTAATAGGGACGGCGTGCGGATTGTTTCTCAGACAGACGACGAAAGTCCTCCACCAATAAAGCCCTCAGACAACCATTTGTCTTTAGCAGATTTAGACTCGATAAAAGTCATCGGAAAAGGAAATGGTGGAGTTGTTCAATTAGTCCGACATAAATGGACGAGCCAGTTTTTTGCTCTAAAGGTGATTCAGATGAATGCCGAGGAATCTTATTGTAGGCTCGTTGCTAAGGAACTAAAAATTAATCAGTTGGCACAAAACCCTTTTATCGTTGTCTGTTACCAGATCTTCTATGACAATGGTGCCATTTTCATAATCTTGGAATACATGGATGGCGGATCGCTTGCAGATCTTCTAAAAAAAGTTGAAACAATCCTAGAACCTTATCTTGCAGCCATTTGTTACCAGGTATTAAAGGGGTTAATATACCTTCACCATGAAAAACATGTCATCCATAGAGACCTTAAGCCTTCAAATTTGTTGATAAATCATAGAGGGGAAGTTAAGATTACTGACTTTGGCGTTAGCGCTATACTGGCGAGTACGGCTGATCAAGCAAATTCTTTCGTTGGCACGTATGCTTACATGTCTCCGGAGAGACTCAATGGGGACAAATATGACAACAAAAGTGACATATGGAGTTTGGGTTTGGTTTTGCTAGAATGTGCTACGGGTCAATTTCCATATGCTCCACCGGATAAGGATAAAGGATGGGAAGGTTTTTTTGATGTTATGGTAGCTGTAGTAGAACTAGCATCACCTTCTGCGCCCGAACAATTTTCTCCAGAGTTTTGCTCTTTCATTTCTTCATGCTTACAGAAAGACCCTCAGAAGAGAAGCTCTGCTCGCGAACTTCTGGTACATCCTTTCATCAAAAACAACCTTCTAATTTTTATTTGGAACAGGAGTCAGCCACAGGCTCTTCCACTTTGA 1047 41.83 MKKDSSMNPNLTLLLPPPDEVSFAFITRSGTFTDGDLLVNRDGVRIVSQTDDESPPPIKPSDNHLSLADLDSIKVIGKGNGGVVQLVRHKWTSQFFALKVIQMNAEESYCRLVAKELKINQLAQNPFIVVCYQIFYDNGAIFIILEYMDGGSLADLLKKVETILEPYLAAICYQVLKGLIYLHHEKHVIHRDLKPSNLLINHRGEVKITDFGVSAILASTADQANSFVGTYAYMSPERLNGDKYDNKSDIWSLGLVLLECATGQFPYAPPDKDKGWEGFFDVMVAVVELASPSAPEQFSPEFCSFISSCLQKDPQKRSSARELLVHPFIKNNLLIFIWNRSQPQALPL 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3692369 3694867 + CrPI670011_11g006610.1 Cre11g0661 512406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0661 348 SMART serkin_6 70 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0661 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0661 348 Gene3D Transferase(Phosphotransferase) domain 1 150 337 - -
Cre11g0661 348 CDD PKc_MAPKK_plant_like 68 331 - -
Cre11g0661 348 FunFam Mitogen-activated protein kinase kinase 1 52 149 - -
Cre11g0661 348 SUPERFAMILY Protein kinase-like (PK-like) 55 341 IPR011009 -
Cre11g0661 348 ProSiteProfiles Protein kinase domain profile. 70 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0661 348 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524(InterPro)
Cre11g0661 348 FunFam mitogen-activated protein kinase kinase 3 150 334 - -
Cre11g0661 348 Gene3D Phosphorylase Kinase; domain 1 49 149 - -
Cre11g0661 348 Pfam Protein kinase domain 73 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0661 348 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 46 331 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1964 Cre-Chr2:33071044 Cre11g0661 Cre-Chr11:3692369 3.10E-30 dispersed
Cre09g0692 Cre-Chr9:6644025 Cre11g0661 Cre-Chr11:3692369 1.70E-31 dispersed
Cre10g1535 Cre-Chr10:29314766 Cre11g0661 Cre-Chr11:3692369 2.50E-56 dispersed
Cre11g0661 Cre-Chr11:3692369 Cre11g0697 Cre-Chr11:4058159 1.00E-113 dispersed
Cre11g0661 Cre-Chr11:3692369 Cre03g1805 Cre-Chr3:34901700 4.70E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64523 PF00069 Pkinase 8.70E-70 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0661 K20603 - csv:101206374 634.795