Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0695 ATGTCGTGGCAAACGTACGTCGATGATCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATCGGCCACGATGGCAGCGTCTGGGCTCAGAGCTCCTCATTTCCTCAGTTCAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAACCAGGTCATCTTGCACCTACTGGATTACACCTTGGAGGTACAAAGTATATGGTGATCCAAGGAGAGCCTGGAGCTGTCATCCGTGGAAAGAAGGGATCTGGAGGAATTACCATAAAGAAGACTGGTCAAGCTCTAGTCTTTGGAATTTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTCGAGAGGCTGGGCGATTACCTTGTCGATCAGGGTCTGTAG 402 50.0 MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQFKPEEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4050903 4052398 + CrPI670011_11g006950.1 Cre11g0695 512440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0695 133 PANTHER PROFILIN 1 132 IPR005455 GO:0003779(InterPro)|GO:0003785(PANTHER)|GO:0005938(PANTHER)|GO:0042989(PANTHER)
Cre11g0695 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 FunFam Profilin 1 133 - -
Cre11g0695 133 SMART prof_2 1 133 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Cre11g0695 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
Cre11g0695 133 Pfam Profilin 1 132 IPR048278 GO:0003779(InterPro)
Cre11g0695 133 CDD PROF 2 132 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779(InterPro)
Cre11g0695 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0023 Cre-Chr9:562211 Cre11g0695 Cre-Chr11:4050903 2.80E-61 dispersed
Cre11g0695 Cre-Chr11:4050903 Cre11g1922 Cre-Chr11:30977833 1.60E-56 dispersed
Cre11g0695 Cre-Chr11:4050903 Cre11g0696 Cre-Chr11:4054355 1.60E-59 tandem
Cre11g0695 Cre-Chr11:4050903 Cre07g1699 Cre-Chr7:32460181 1.90E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0695 K05759 - csv:101219322 260.381