Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0696 | ATGTCGTGGCAAGTTTACGTCGATGATCATTTGATGTGCGAAATTGAGGGCAATCACCTCACATCTGCGGCCATTATCGGCCAAGACGGCAGTGTTTGGGCTAAAAGCGAAAATTTCCCTCAGCTCAAGCCTGAAGAAATTACTGGCATCTTGAATGACTTCAATGAACCCGGGACGCTTGCTCCGACTGGTTTGTACATTGGTGGTTCAAAATATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGCTCTGGCTTTAGTCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATTGTTGAAAGGCTTGGGGATTATCTCGTCGAACAGGGCCTCTAA | 396 | 47.22 | MSWQVYVDDHLMCEIEGNHLTSAAIIGQDGSVWAKSENFPQLKPEEITGILNDFNEPGTLAPTGLYIGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTALALVIGIYDEPMTPGQCNMIVERLGDYLVEQGL | 131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4054355 | 4055701 | + | CrPI670011_11g006960.1 | Cre11g0696 | 512441 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0696 | 131 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 130 | IPR036140 | - | |
Cre11g0696 | 131 | PRINTS | Plant profilin signature | 52 | 66 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Plant profilin signature | 104 | 117 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Plant profilin signature | 117 | 130 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Plant profilin signature | 27 | 40 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Plant profilin signature | 84 | 99 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Plant profilin signature | 71 | 80 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PANTHER | PROFILIN | 1 | 130 | IPR005455 | GO:0003779(InterPro)|GO:0003785(PANTHER)|GO:0005938(PANTHER)|GO:0042989(PANTHER) | |
Cre11g0696 | 131 | CDD | PROF | 2 | 130 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | Gene3D | Dynein light chain 2a, cytoplasmic | 2 | 131 | - | - | |
Cre11g0696 | 131 | FunFam | Profilin | 1 | 131 | - | - | |
Cre11g0696 | 131 | SMART | prof_2 | 1 | 131 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Profilin signature | 113 | 130 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Profilin signature | 21 | 30 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Profilin signature | 64 | 78 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Profilin signature | 40 | 60 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | PRINTS | Profilin signature | 100 | 113 | IPR005455 | GO:0003779(InterPro) | |
Cre11g0696 | 131 | Pfam | Profilin | 1 | 131 | IPR048278 | GO:0003779(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre07g1699 | Cre-Chr7:32460181 | Cre11g0696 | Cre-Chr11:4054355 | 7.90E-56 | dispersed | |
Cre11g0696 | Cre-Chr11:4054355 | Cre11g1922 | Cre-Chr11:30977833 | 6.90E-60 | dispersed | |
Cre11g0695 | Cre-Chr11:4050903 | Cre11g0696 | Cre-Chr11:4054355 | 1.60E-59 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0696 | K05759 | - | cit:102628130 | 250.366 |