Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0697 | ATGAAGACCAAGACGCCATTGAAGCAGCTCAAGCTCTCTGTTCCTGTTCAAGAAACTTCCATCCGTTCTTTCCTGACTGCAAGTGGAACATTTCACGACGGCAATCTACTACTTAACCAGAAAGGATTACGGCTTGTATCTGAAGAGAAAGAAGCGCAGACTTCAGATTGTAAGGAGCTTGATGTTGATTTCTCATTGGAAGATCTTGAGACTGTGAAAGTTATTGGAAAAGGAAGTGGAGGTGTAGTACAACTTGTTCGACACAAGTGGGTTGGACAACTTTTTGCCTTAAAGGTAATCCAGATGAACATACAAGAGGATATCCGTAAACAGATAGTACAGGAACTGAAAATAAATCAAGCAGCACAATGTCCACATATTGTGGTCTGCTATCATTCTTTCTACCACAATGGTGCCATTTCTCTTGTGCTAGAATACATGGATCGCGGTTCTCTAGCCGATGTAGTCAGACAAATCAAAACAATTCTTGAACCATATCTTGCAGTTGTTTGTAAACAGGTTTTACAAGGTCTTGTTTACTTGCATCATGAGAGGCATGTTATACACAGAGACATCAAGCCATCCAATCTACTTGTGAACCATAAAGGTGAGGTCAAAATCACTGATTTTGGAGTAAGTGCGATGCTAGCAAGTTCTATGGGTCAAAGAGATACATTTGTAGGGACTTACAATTACATGTCGCCTGAACGAATTAGTGGGGGAACATATGACTACAGCAGTGATATATGGAGTTTGGGCTTGGTAGTACTTGAATGTGCCATCGGAAGGTTTCCTTATTTGCAGTCTGAAGAGCAGCAAAGTTGGCCAAGCTTTTATGAACTCCTAGAGGCAATTGTAGCAAAGCCACCGCCTTCTGCCCCACCGGATCAATTTTCCCCCGAGTTCTGTTCCTTCGTTTCTGCTTGCATTAAGAAGGACCCTAAAGAAAGATCGTCATCATTAGATCTTCTGAATCATCCTTTCATCAAGAAATTCGAAGATAAAGACATTGATGTCGGGATTCTCGTAGGCAGCTTGGATCCTCCGACATGGGAGACAAAGAGAAGATTGAAGCTTTTGAAGCTATGGAAATTGTTAGAAGATGCATCGTCGTCTTCTTTAACGTCTAATGTTTCGTCATTGTCGTTGGCGACAACGGTATCATCATCGGAGGGACCTCTCTATGAACTCTCAGAGCTCATGGCCCATCTCCCCATCAAGAGAGGGTTATCAAAGTTCTACGATGGAAAATCACAATCTTTTACATCTCTAGCAAGTGCAAAGAGCTTAGAAGATCTTGCAAAGAGAGTGAATAATATTTCTCAAAGGAAAAGGATGAAGTCTTGTAAGAGCTATGGAGGAGGTTTTGATGCTCAAAAATCTTCTTATTCTCCAAAGCCTTTGATTGCTAAAAAAGTTTCAAAGGGTTCTTCTTTGCTATCTCCTGTTTCTAAGAGAAATAATAGGCTATTTGATAGCCATTCTTGA | 1488 | 40.99 | MKTKTPLKQLKLSVPVQETSIRSFLTASGTFHDGNLLLNQKGLRLVSEEKEAQTSDCKELDVDFSLEDLETVKVIGKGSGGVVQLVRHKWVGQLFALKVIQMNIQEDIRKQIVQELKINQAAQCPHIVVCYHSFYHNGAISLVLEYMDRGSLADVVRQIKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGGTYDYSSDIWSLGLVVLECAIGRFPYLQSEEQQSWPSFYELLEAIVAKPPPSAPPDQFSPEFCSFVSACIKKDPKERSSSLDLLNHPFIKKFEDKDIDVGILVGSLDPPTWETKRRLKLLKLWKLLEDASSSSLTSNVSSLSLATTVSSSEGPLYELSELMAHLPIKRGLSKFYDGKSQSFTSLASAKSLEDLAKRVNNISQRKRMKSCKSYGGGFDAQKSSYSPKPLIAKKVSKGSSLLSPVSKRNNRLFDSHS | 495 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4058159 | 4066813 | + | CrPI670011_11g006970.1 | Cre11g0697 | 512442 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0697 | 495 | Pfam | Protein kinase domain | 70 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0697 | 495 | ProSiteProfiles | Protein kinase domain profile. | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0697 | 495 | FunFam | Mitogen-activated protein kinase kinase 6 | 39 | 148 | - | - | |
Cre11g0697 | 495 | Gene3D | Phosphorylase Kinase; domain 1 | 38 | 148 | - | - | |
Cre11g0697 | 495 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 187 | 199 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g0697 | 495 | FunFam | Mitogen-activated protein kinase kinase 6 | 150 | 348 | - | - | |
Cre11g0697 | 495 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 45 | 351 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Cre11g0697 | 495 | SMART | serkin_6 | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0697 | 495 | SUPERFAMILY | Protein kinase-like (PK-like) | 67 | 374 | IPR011009 | - | |
Cre11g0697 | 495 | MobiDBLite | consensus disorder prediction | 474 | 495 | - | - | |
Cre11g0697 | 495 | CDD | PKc_MAPKK_plant_like | 67 | 333 | - | - | |
Cre11g0697 | 495 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 345 | - | - | |
Cre11g0697 | 495 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g1805 | Cre-Chr3:34901700 | Cre11g0697 | Cre-Chr11:4058159 | 2.70E-125 | dispersed | |
Cre07g1779 | Cre-Chr7:33258926 | Cre11g0697 | Cre-Chr11:4058159 | 3.80E-55 | dispersed | |
Cre08g1200 | Cre-Chr8:25265709 | Cre11g0697 | Cre-Chr11:4058159 | 2.20E-06 | dispersed | |
Cre11g0661 | Cre-Chr11:3692369 | Cre11g0697 | Cre-Chr11:4058159 | 1.00E-113 | dispersed | |
Cre11g0697 | Cre-Chr11:4058159 | Cre11g1922 | Cre-Chr11:30977833 | 1.60E-27 | dispersed | |
Cre08g0921 | Cre-Chr8:22364769 | Cre11g0697 | Cre-Chr11:4058159 | 1.40E-07 | transposed | |
Cre10g1535 | Cre-Chr10:29314766 | Cre11g0697 | Cre-Chr11:4058159 | 1.30E-65 | transposed | |
Cre05g1744 | Cre-Chr5:29164764 | Cre11g0697 | Cre-Chr11:4058159 | 6.20E-07 | transposed | |
Cre11g0697 | Cre-Chr11:4058159 | Cre03g1872 | Cre-Chr3:35647610 | 8.80E-23 | wgd | |
Cre11g0697 | Cre-Chr11:4058159 | Cre07g1698 | Cre-Chr7:32449872 | 1.80E-20 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64526 | PF00069 | Pkinase | 4.30E-66 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0697 | K04368 | - | csv:101218848 | 673.315 |