Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0713 | ATGGCCGACGCCACCGTGCCGGAGACCGACTCCGGTGGCAGCGCCAATTCCTGGTCCTCGTCTTCTTCCTCGACGTCATGTTCGATCTCGTCTCCGTCGAAACAAGTCGGTAGCCGAACGTCGTCGAAGCGCAGTCGAGAGAGTAGCAACAATAGTCGTCACCCAAGTTACCGAGGCGTCCGAATGAGGGCGTGGGGCAAATGGGTGTCGGAAATTCGAGAGCCGAAGAAGAAGAGTCGGATCTGGCTCGGCACCTTCGCCACACCCGACATGGCGGCACGTGCTCACGACGTAGCCGCCCTTACTATCAAAGGCAATTCAGCCATCCTCAATTTCCCTGAACTCGCCGCCTCATTACCCCGCCCCGCCTCCTCGTCCCCTCGGGACGTTCAATCCGCCGCCGCCCTCGCCGCTTCAATGCAACTTCCTGACGTCGTCTCACCTCCTCCACCACCGCCACCCCCACCCTCATCGCCTCCCTTCTCGTCATCGTCCGAGTTGGACGAGTCGACACCGGAGGAATTGAGTGAAATTGTGGTGCTGCCCAGTTTGGGAACGGGGTACGAGGAATCGGCCGAGTCAGTGACCGAGTTTGTGTTTGACGAGTGGCAATATAGCTATGAGCCGTGGGATCAACAAAATCAAAGCTCAAAAGAAGAAGAAGAAGAAGCTTATGAGTACTTTATAGATCAAATGGCAATGGCGGAAAAAGAGTGTGTGATTCCCACTGCATTATTTCAACCTTTACCTTTCTCGTGGTAA | 762 | 55.64 | MADATVPETDSGGSANSWSSSSSSTSCSISSPSKQVGSRTSSKRSRESSNNSRHPSYRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQLPDVVSPPPPPPPPPSSPPFSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQYSYEPWDQQNQSSKEEEEEAYEYFIDQMAMAEKECVIPTALFQPLPFSW | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4246311 | 4247072 | - | CrPI670011_11g007130.1 | Cre11g0713 | 512458 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0713 | 253 | ProSiteProfiles | AP2/ERF domain profile. | 56 | 113 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre11g0713 | 253 | SMART | rav1_2 | 56 | 119 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre11g0713 | 253 | Coils | Coil | 218 | 238 | - | - | |
Cre11g0713 | 253 | MobiDBLite | consensus disorder prediction | 142 | 176 | - | - | |
Cre11g0713 | 253 | Pfam | AP2 domain | 55 | 105 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre11g0713 | 253 | MobiDBLite | consensus disorder prediction | 9 | 45 | - | - | |
Cre11g0713 | 253 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 39 | 201 | IPR051032 | - | |
Cre11g0713 | 253 | CDD | AP2 | 55 | 115 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre11g0713 | 253 | Gene3D | AP2/ERF domain | 56 | 114 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre11g0713 | 253 | PRINTS | Ethylene responsive element binding protein signature | 79 | 95 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre11g0713 | 253 | PRINTS | Ethylene responsive element binding protein signature | 57 | 68 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre11g0713 | 253 | SUPERFAMILY | DNA-binding domain | 56 | 114 | IPR016177 | GO:0003677(InterPro) | |
Cre11g0713 | 253 | FunFam | Ethylene-responsive transcription factor 2 | 55 | 114 | - | - | |
Cre11g0713 | 253 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Cre11g0713 | 253 | MobiDBLite | consensus disorder prediction | 144 | 161 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre08g0097 | Cre-Chr8:2118342 | Cre11g0713 | Cre-Chr11:4246311 | 9.30E-27 | dispersed | |
Cre10g0498 | Cre-Chr10:4143869 | Cre11g0713 | Cre-Chr11:4246311 | 1.40E-36 | dispersed | |
Cre11g0713 | Cre-Chr11:4246311 | Cre11g1934 | Cre-Chr11:31117500 | 4.50E-39 | dispersed | |
Cre11g0713 | Cre-Chr11:4246311 | Cre06g1719 | Cre-Chr6:14667212 | 8.40E-46 | wgd | |
Cre11g0713 | Cre-Chr11:4246311 | Cre07g1686 | Cre-Chr7:32302488 | 8.20E-33 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54648 | PF00847 | AP2 | 7.40E-13 | CL0081 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0713 | K09286 | - | csv:101212945 | 341.273 |