Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0723 | ATGGAACCTTCATCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGATATCATCCAGAAGTACGAGATCCTCGAGCGGGTCGGATCCGGCGCTTATTCCGATGTCCACCGTGCGCGGCGGCTCTCCGATGGCGTTATCGTCGCCTTGAAGGAGATCCACGATTATCAGTCGGCGTTCCGCGAAATCGAGGCGCTTCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCACGAGTACTTTTGGCGCGAGGATGAGGATGCCGTGCTTGTTCTCGAGTTTATGAGAACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGATCGGACCGGGTAGAATCTGGGCGGGGGCTTCCGGCCGGGGAGTTGAAGCGGTGGATGATCCAGATTTTGAGTGGTCTTGATGCTTGTCATAGGAATATGATCGTGCATAGGGATATGAAACCTAGCAATTTGTTGATCTCCGATGATGGCGTGCTCAAGCTTGCCGATTTTGGACAGGCAAGGATACTCATGGAGCCTGAATATGTTGAATCGAATGAGATCTCTCAACCATGTGAGATGAACTCTTCAGATCAGGTGCCTGCTTCTCAGCCATCTACAATTTTTCCAGGAACAGAAAGCTCGGTTCGAGAAGGTAACAGAACTGAGGAACAAGAACCAATTAGCAAAGAAGAATATTTTAGAGTTTTAGACGAGTTGAAAGCAAAAAATTCAGCAAATGAATTTGACAAGGAAACATATACTTATGATGGAGATACATCTTGCTTAGCAACATGTACCACAAGTGACCTTGAAGATGATCCATTCAAAGGTTCATCATATTCTTACGAAATGGAAGGGGGAGTTCCAGCAGATGATGGACAAGGTTCTCTCACCTCGTGTGTCGGTACTCGCTGGTTCAGGGCCCCTGAATTACTCTATGGCTCTACGAGCTACGGTTTGGAGATCGACTTATGGTCATTGGGCTGCATTTTTGCTGAACTTTTTACATTGGAACCCCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAAAATCTTCACTACTCTAGGCAACTTGACTGAAGATTCGTGGCCAGGTTGTTCCGAACTTCCTGATTTTCAAATTATATCATTCAACACAATAGAAAAGCCGATCGGTCTAGAAGCATGTCTTCCCAACTGTTCTCCTGATGAAATTTCTATTGTTAAAAGACTTCTTTGTTACAACCCGGCTAATCGAGCGACTGCTATGGAATTGTTACAAGATAAGTATTTCACTGAGGAGCCACTTCCCGTTCCCTTGTCTGAGCTTCATGTTCCTACGACAAAAACTGGACAGGATGAGTATTCTCCTGCAGGATGGTACGACTACAATGAGTCGGATTCTGATATGGATGAATTCGGCCCCATGAATGTTACCACCACTGCCACTGGTTACTCCATTCAATTTGATTGA | 1449 | 46.31 | MEPSSAKSWSIHTRPDIIQKYEILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDRVESGRGLPAGELKRWMIQILSGLDACHRNMIVHRDMKPSNLLISDDGVLKLADFGQARILMEPEYVESNEISQPCEMNSSDQVPASQPSTIFPGTESSVREGNRTEEQEPISKEEYFRVLDELKAKNSANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYEMEGGVPADDGQGSLTSCVGTRWFRAPELLYGSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELPDFQIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYNPANRATAMELLQDKYFTEEPLPVPLSELHVPTTKTGQDEYSPAGWYDYNESDSDMDEFGPMNVTTTATGYSIQFD | 482 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4363799 | 4365759 | + | CrPI670011_11g007230.1 | Cre11g0723 | 512468 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0723 | 482 | Gene3D | Transferase(Phosphotransferase) domain 1 | 270 | 433 | - | - | |
Cre11g0723 | 482 | MobiDBLite | consensus disorder prediction | 188 | 223 | - | - | |
Cre11g0723 | 482 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 109 | - | - | |
Cre11g0723 | 482 | FunFam | Cyclin-dependent kinase F-1 | 12 | 106 | - | - | |
Cre11g0723 | 482 | PANTHER | CELL DIVISION PROTEIN KINASE | 20 | 423 | IPR050108 | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0019912(PANTHER) | |
Cre11g0723 | 482 | Gene3D | Transferase(Phosphotransferase) domain 1 | 110 | 199 | - | - | |
Cre11g0723 | 482 | Pfam | Protein kinase domain | 21 | 179 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0723 | 482 | Pfam | Protein kinase domain | 292 | 423 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0723 | 482 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 441 | IPR011009 | - | |
Cre11g0723 | 482 | ProSiteProfiles | Protein kinase domain profile. | 21 | 423 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0723 | 482 | MobiDBLite | consensus disorder prediction | 188 | 212 | - | - | |
Cre11g0723 | 482 | ProSitePatterns | Protein kinases ATP-binding region signature. | 27 | 50 | IPR017441 | GO:0005524(InterPro) | |
Cre11g0723 | 482 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 144 | 156 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g0723 | 482 | SMART | serkin_6 | 21 | 423 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre11g0723 | Cre-Chr11:4363799 | Cre05g2344 | Cre-Chr5:35045280 | 5.20E-36 | dispersed | |
Cre11g0723 | Cre-Chr11:4363799 | Cre03g1910 | Cre-Chr3:36136732 | 3.00E-28 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64528 | PF00069 | Pkinase | 6.00E-32 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0723 | - | - | - | 0.0 |