Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0731 | ATGTCAACCCCTACTCCGGCGCCGACGTCTCCGCCGGCGACCAATACGACGTCTCCGCCGCCACCAACCCCTAGTGCTCCGCCACCATCGACTCCAACGCAACCTCCGCCGTCCACTACACCACCACCAACAACCACTCCGTCGCCGCCTCCGCCTTCCGCTGCAACGCCGCCCACTCCTTCTCGGCCCCCGCCGACTTCCGCGCCACCTCCGGCCACCCCGTCACTGCCTCCACCGTCTACTCCCCAAGCCGCCCCGCCCACTGCATCTCCCTCGCCGCCGGCTTCCACCCCTCCGCCGTCCAGGCCTTCGACTTCTCCACCTCCTCCGTCTTCTACTAGCCCTCCGTCTCCTCCAACTGGCCGTAGTCCGCCGCCACCAACTTCTCGTACGCCGTCCACTCCGTCAAGAAGTCCTCCACCTCCCTCAACGTCGTCGTCGTCCTCCTCTTCTAATATTTCAACTGGACTTGTCGTCGGAATTGCAATTGGTGGAGTGGTAATTGTTCTTCTGCTAAGTATATTGTGCCTTTGTTGTACGAAGAAAAGGAGAAGACGACGCGATGAAGAGGGATTTTATCCACACCCTCCGCCTGGCCCTAAAGTTGACCCTTATGCTGGTCAGCAGCAATGGCAGCACAATGCTCCTCTACCGCCTGATCCTTTAATCGGGACGGTGCCTAAGCCATCTCCTCCTCCGGTAGTTGCATCTCGACCCCCGCATTCTCCGACTGGCGTTCCACCTCAACCGCTCTATATGAGTAGCAGTGGAGGTTCGGGTTCTATGTATTCTGGGCCTGAAACGCCGCTCCCTCCGCCGCCTCCCCCTCCTATGGCCTTTGGTTTCTCAAAGAGTACTTTTACTTATGAGGAATTGGCAATGGCGACGGATGGCTTCTCGGATGCAAATCTCCTCGGACAAGGTGGATTCGGATATGTGCATAGAGGAGTTCTTCCTAATGGAAAGGAAGTTGCAGTCAAGCAGTTGAAAGCTGGGAGCGGGCAGGGCGAACGAGAATTTCAGGCCGAAGTTGATATTATCAGCCGAGTTCATCATAAACATCTTGTTTCTTTGGTTGGATATTGCATAACTGGGTCTCAAAGATTGCTTGTTTATGAGTTTGTTCCAAACAACACTTTAGAGTTCCATTTACATGGTAAAGGGCGGCCAACGATGGATTGGCAGACGAGACTTAAAATCGCATTAGGATCAGCAAAAGGACTAGCTTATATTCATGAGGATTGTCACCCGAAAATCATTCATCGCGATATTAAGGCTGCTAACATATTGTTAGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTTGCAAAGTTTACTTCTGATGTCAATACCCATGTATCAACTCGAGTGATGGGTACTTTTGGGTATCTTGCACCAGAGTATGCCTCTAGTGGCAAACTTACTGAGAAATCAGATGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACTGGTCGTCGACCAGTCGATATGAGTAATACTTCCATGGAAGATAGTCTTGTGGACTGGGCTAGGCCGCTAATGAACCGAGCTTTAGAAGATGGAAACTTTGATGCTTTGGTCGATCCAAGGATGCAAAACAACTACAACCACAATGAGATGGCTCGCATGGTTGCCTGTGCCGCTGCTTGTGTTCGACATTCTGCTAGGCGTCGACCACGAATGAGTCAGGTAGTACGAGCGCTCGAAGGAGACACATCACTATCGGATCTCAACGAAGGGGTCAAACCCGGGCAGAGCACAATGTACAGTTCTCATGGAAGCTCAGATTATGACACCCACCAGTACAACGAGGACTTGAGAAAGTTCAGGAAGATGGCACTGGGAAGTACAGAATATGGAGCAAGCAGCGAATACAGCGGACCAACGAGCGAGTACGGGCTGTATCCTTCGGGATCGAGCAGCGAAGGGCAAACCACCAGAGAAATGGAGATGAGAACAGCAAAGAAAGAAAGTGGAGGCTTCAGTGGACGCTCTTGA | 2010 | 51.89 | MSTPTPAPTSPPATNTTSPPPPTPSAPPPSTPTQPPPSTTPPPTTTPSPPPPSAATPPTPSRPPPTSAPPPATPSLPPPSTPQAAPPTASPSPPASTPPPSRPSTSPPPPSSTSPPSPPTGRSPPPPTSRTPSTPSRSPPPPSTSSSSSSSNISTGLVVGIAIGGVVIVLLLSILCLCCTKKRRRRRDEEGFYPHPPPGPKVDPYAGQQQWQHNAPLPPDPLIGTVPKPSPPPVVASRPPHSPTGVPPQPLYMSSSGGSGSMYSGPETPLPPPPPPPMAFGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVDIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWQTRLKIALGSAKGLAYIHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMSNTSMEDSLVDWARPLMNRALEDGNFDALVDPRMQNNYNHNEMARMVACAAACVRHSARRRPRMSQVVRALEGDTSLSDLNEGVKPGQSTMYSSHGSSDYDTHQYNEDLRKFRKMALGSTEYGASSEYSGPTSEYGLYPSGSSSEGQTTREMEMRTAKKESGGFSGRS | 669 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4424489 | 4427752 | - | CrPI670011_11g007310.1 | Cre11g0731 | 512476 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0731 | 669 | FunFam | proline-rich receptor-like protein kinase PERK1 | 277 | 374 | - | - | |
Cre11g0731 | 669 | ProSitePatterns | Protein kinases ATP-binding region signature. | 305 | 327 | IPR017441 | GO:0005524(InterPro) | |
Cre11g0731 | 669 | MobiDBLite | consensus disorder prediction | 1 | 142 | - | - | |
Cre11g0731 | 669 | MobiDBLite | consensus disorder prediction | 1 | 152 | - | - | |
Cre11g0731 | 669 | MobiDBLite | consensus disorder prediction | 578 | 603 | - | - | |
Cre11g0731 | 669 | Gene3D | Phosphorylase Kinase; domain 1 | 278 | 374 | - | - | |
Cre11g0731 | 669 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 375 | 583 | - | - | |
Cre11g0731 | 669 | MobiDBLite | consensus disorder prediction | 623 | 651 | - | - | |
Cre11g0731 | 669 | SUPERFAMILY | Protein kinase-like (PK-like) | 274 | 572 | IPR011009 | - | |
Cre11g0731 | 669 | MobiDBLite | consensus disorder prediction | 622 | 669 | - | - | |
Cre11g0731 | 669 | Gene3D | Transferase(Phosphotransferase) domain 1 | 375 | 585 | - | - | |
Cre11g0731 | 669 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 419 | 431 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g0731 | 669 | MobiDBLite | consensus disorder prediction | 582 | 601 | - | - | |
Cre11g0731 | 669 | PRINTS | Proline rich extensin signature | 4 | 20 | - | - | |
Cre11g0731 | 669 | PRINTS | Proline rich extensin signature | 49 | 74 | - | - | |
Cre11g0731 | 669 | PRINTS | Proline rich extensin signature | 24 | 41 | - | - | |
Cre11g0731 | 669 | MobiDBLite | consensus disorder prediction | 248 | 263 | - | - | |
Cre11g0731 | 669 | SMART | serkin_6 | 299 | 535 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0731 | 669 | MobiDBLite | consensus disorder prediction | 185 | 272 | - | - | |
Cre11g0731 | 669 | Pfam | Protein tyrosine and serine/threonine kinase | 304 | 572 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g0731 | 669 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 125 | 616 | IPR047117 | - | |
Cre11g0731 | 669 | ProSiteProfiles | Protein kinase domain profile. | 299 | 578 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0731 | 669 | MobiDBLite | consensus disorder prediction | 220 | 247 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g2700 | Cre-Chr5:37929580 | Cre11g0731 | Cre-Chr11:4424489 | 1.40E-132 | dispersed | |
Cre07g1280 | Cre-Chr7:26841955 | Cre11g0731 | Cre-Chr11:4424489 | 1.30E-156 | dispersed | |
Cre07g1603 | Cre-Chr7:31509250 | Cre11g0731 | Cre-Chr11:4424489 | 4.20E-78 | dispersed | |
Cre07g1723 | Cre-Chr7:32687217 | Cre11g0731 | Cre-Chr11:4424489 | 1.70E-86 | dispersed | |
Cre08g0561 | Cre-Chr8:18375020 | Cre11g0731 | Cre-Chr11:4424489 | 1.10E-67 | dispersed | |
Cre08g1550 | Cre-Chr8:28157548 | Cre11g0731 | Cre-Chr11:4424489 | 1.70E-80 | dispersed | |
Cre11g0731 | Cre-Chr11:4424489 | Cre11g0934 | Cre-Chr11:6612529 | 1.40E-161 | dispersed | |
Cre11g2138 | Cre-Chr11:33088320 | Cre11g0731 | Cre-Chr11:4424489 | 2.10E-71 | dispersed | |
Cre09g0631 | Cre-Chr9:5960346 | Cre11g0731 | Cre-Chr11:4424489 | 2.70E-67 | transposed | |
Cre11g1771 | Cre-Chr11:29327663 | Cre11g0731 | Cre-Chr11:4424489 | 1.40E-44 | transposed | |
Cre11g0731 | Cre-Chr11:4424489 | Cre05g0313 | Cre-Chr5:2903402 | 7.40E-39 | wgd | |
Cre11g0731 | Cre-Chr11:4424489 | Cre06g1669 | Cre-Chr6:13440115 | 4.80E-197 | wgd | |
Cre11g0731 | Cre-Chr11:4424489 | Cre09g0221 | Cre-Chr9:2312487 | 1.50E-62 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64529 | PF07714 | PK_Tyr_Ser-Thr | 7.70E-47 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0731 | - | - | - | 0.0 |