Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0731 ATGTCAACCCCTACTCCGGCGCCGACGTCTCCGCCGGCGACCAATACGACGTCTCCGCCGCCACCAACCCCTAGTGCTCCGCCACCATCGACTCCAACGCAACCTCCGCCGTCCACTACACCACCACCAACAACCACTCCGTCGCCGCCTCCGCCTTCCGCTGCAACGCCGCCCACTCCTTCTCGGCCCCCGCCGACTTCCGCGCCACCTCCGGCCACCCCGTCACTGCCTCCACCGTCTACTCCCCAAGCCGCCCCGCCCACTGCATCTCCCTCGCCGCCGGCTTCCACCCCTCCGCCGTCCAGGCCTTCGACTTCTCCACCTCCTCCGTCTTCTACTAGCCCTCCGTCTCCTCCAACTGGCCGTAGTCCGCCGCCACCAACTTCTCGTACGCCGTCCACTCCGTCAAGAAGTCCTCCACCTCCCTCAACGTCGTCGTCGTCCTCCTCTTCTAATATTTCAACTGGACTTGTCGTCGGAATTGCAATTGGTGGAGTGGTAATTGTTCTTCTGCTAAGTATATTGTGCCTTTGTTGTACGAAGAAAAGGAGAAGACGACGCGATGAAGAGGGATTTTATCCACACCCTCCGCCTGGCCCTAAAGTTGACCCTTATGCTGGTCAGCAGCAATGGCAGCACAATGCTCCTCTACCGCCTGATCCTTTAATCGGGACGGTGCCTAAGCCATCTCCTCCTCCGGTAGTTGCATCTCGACCCCCGCATTCTCCGACTGGCGTTCCACCTCAACCGCTCTATATGAGTAGCAGTGGAGGTTCGGGTTCTATGTATTCTGGGCCTGAAACGCCGCTCCCTCCGCCGCCTCCCCCTCCTATGGCCTTTGGTTTCTCAAAGAGTACTTTTACTTATGAGGAATTGGCAATGGCGACGGATGGCTTCTCGGATGCAAATCTCCTCGGACAAGGTGGATTCGGATATGTGCATAGAGGAGTTCTTCCTAATGGAAAGGAAGTTGCAGTCAAGCAGTTGAAAGCTGGGAGCGGGCAGGGCGAACGAGAATTTCAGGCCGAAGTTGATATTATCAGCCGAGTTCATCATAAACATCTTGTTTCTTTGGTTGGATATTGCATAACTGGGTCTCAAAGATTGCTTGTTTATGAGTTTGTTCCAAACAACACTTTAGAGTTCCATTTACATGGTAAAGGGCGGCCAACGATGGATTGGCAGACGAGACTTAAAATCGCATTAGGATCAGCAAAAGGACTAGCTTATATTCATGAGGATTGTCACCCGAAAATCATTCATCGCGATATTAAGGCTGCTAACATATTGTTAGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTTGCAAAGTTTACTTCTGATGTCAATACCCATGTATCAACTCGAGTGATGGGTACTTTTGGGTATCTTGCACCAGAGTATGCCTCTAGTGGCAAACTTACTGAGAAATCAGATGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACTGGTCGTCGACCAGTCGATATGAGTAATACTTCCATGGAAGATAGTCTTGTGGACTGGGCTAGGCCGCTAATGAACCGAGCTTTAGAAGATGGAAACTTTGATGCTTTGGTCGATCCAAGGATGCAAAACAACTACAACCACAATGAGATGGCTCGCATGGTTGCCTGTGCCGCTGCTTGTGTTCGACATTCTGCTAGGCGTCGACCACGAATGAGTCAGGTAGTACGAGCGCTCGAAGGAGACACATCACTATCGGATCTCAACGAAGGGGTCAAACCCGGGCAGAGCACAATGTACAGTTCTCATGGAAGCTCAGATTATGACACCCACCAGTACAACGAGGACTTGAGAAAGTTCAGGAAGATGGCACTGGGAAGTACAGAATATGGAGCAAGCAGCGAATACAGCGGACCAACGAGCGAGTACGGGCTGTATCCTTCGGGATCGAGCAGCGAAGGGCAAACCACCAGAGAAATGGAGATGAGAACAGCAAAGAAAGAAAGTGGAGGCTTCAGTGGACGCTCTTGA 2010 51.89 MSTPTPAPTSPPATNTTSPPPPTPSAPPPSTPTQPPPSTTPPPTTTPSPPPPSAATPPTPSRPPPTSAPPPATPSLPPPSTPQAAPPTASPSPPASTPPPSRPSTSPPPPSSTSPPSPPTGRSPPPPTSRTPSTPSRSPPPPSTSSSSSSSNISTGLVVGIAIGGVVIVLLLSILCLCCTKKRRRRRDEEGFYPHPPPGPKVDPYAGQQQWQHNAPLPPDPLIGTVPKPSPPPVVASRPPHSPTGVPPQPLYMSSSGGSGSMYSGPETPLPPPPPPPMAFGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVDIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWQTRLKIALGSAKGLAYIHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMSNTSMEDSLVDWARPLMNRALEDGNFDALVDPRMQNNYNHNEMARMVACAAACVRHSARRRPRMSQVVRALEGDTSLSDLNEGVKPGQSTMYSSHGSSDYDTHQYNEDLRKFRKMALGSTEYGASSEYSGPTSEYGLYPSGSSSEGQTTREMEMRTAKKESGGFSGRS 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4424489 4427752 - CrPI670011_11g007310.1 Cre11g0731 512476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0731 669 FunFam proline-rich receptor-like protein kinase PERK1 277 374 - -
Cre11g0731 669 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524(InterPro)
Cre11g0731 669 MobiDBLite consensus disorder prediction 1 142 - -
Cre11g0731 669 MobiDBLite consensus disorder prediction 1 152 - -
Cre11g0731 669 MobiDBLite consensus disorder prediction 578 603 - -
Cre11g0731 669 Gene3D Phosphorylase Kinase; domain 1 278 374 - -
Cre11g0731 669 FunFam Proline-rich receptor-like protein kinase PERK1 375 583 - -
Cre11g0731 669 MobiDBLite consensus disorder prediction 623 651 - -
Cre11g0731 669 SUPERFAMILY Protein kinase-like (PK-like) 274 572 IPR011009 -
Cre11g0731 669 MobiDBLite consensus disorder prediction 622 669 - -
Cre11g0731 669 Gene3D Transferase(Phosphotransferase) domain 1 375 585 - -
Cre11g0731 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0731 669 MobiDBLite consensus disorder prediction 582 601 - -
Cre11g0731 669 PRINTS Proline rich extensin signature 4 20 - -
Cre11g0731 669 PRINTS Proline rich extensin signature 49 74 - -
Cre11g0731 669 PRINTS Proline rich extensin signature 24 41 - -
Cre11g0731 669 MobiDBLite consensus disorder prediction 248 263 - -
Cre11g0731 669 SMART serkin_6 299 535 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0731 669 MobiDBLite consensus disorder prediction 185 272 - -
Cre11g0731 669 Pfam Protein tyrosine and serine/threonine kinase 304 572 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0731 669 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 125 616 IPR047117 -
Cre11g0731 669 ProSiteProfiles Protein kinase domain profile. 299 578 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0731 669 MobiDBLite consensus disorder prediction 220 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2700 Cre-Chr5:37929580 Cre11g0731 Cre-Chr11:4424489 1.40E-132 dispersed
Cre07g1280 Cre-Chr7:26841955 Cre11g0731 Cre-Chr11:4424489 1.30E-156 dispersed
Cre07g1603 Cre-Chr7:31509250 Cre11g0731 Cre-Chr11:4424489 4.20E-78 dispersed
Cre07g1723 Cre-Chr7:32687217 Cre11g0731 Cre-Chr11:4424489 1.70E-86 dispersed
Cre08g0561 Cre-Chr8:18375020 Cre11g0731 Cre-Chr11:4424489 1.10E-67 dispersed
Cre08g1550 Cre-Chr8:28157548 Cre11g0731 Cre-Chr11:4424489 1.70E-80 dispersed
Cre11g0731 Cre-Chr11:4424489 Cre11g0934 Cre-Chr11:6612529 1.40E-161 dispersed
Cre11g2138 Cre-Chr11:33088320 Cre11g0731 Cre-Chr11:4424489 2.10E-71 dispersed
Cre09g0631 Cre-Chr9:5960346 Cre11g0731 Cre-Chr11:4424489 2.70E-67 transposed
Cre11g1771 Cre-Chr11:29327663 Cre11g0731 Cre-Chr11:4424489 1.40E-44 transposed
Cre11g0731 Cre-Chr11:4424489 Cre05g0313 Cre-Chr5:2903402 7.40E-39 wgd
Cre11g0731 Cre-Chr11:4424489 Cre06g1669 Cre-Chr6:13440115 4.80E-197 wgd
Cre11g0731 Cre-Chr11:4424489 Cre09g0221 Cre-Chr9:2312487 1.50E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64529 PF07714 PK_Tyr_Ser-Thr 7.70E-47 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0731 - - - 0.0