Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0773 | ATGATGGCCGGAAGCATAGGCAAAGACGAGTGGTCCGATTACGACAGTAGTTGCTCCTCCTCCGTAACCGTCCCAGACTCGAGCCGTAGCTGGATGAGCAACCTCAGCTTTGGAAGCCGGCGTCGCAGCAGTAGCTCAGCCGCAGAAGGCGGCGTGGAGATGAATAATACGACAACGACGACGACGACGACATTAGCATTACAAATGATGAAGCCACACAAGGCGAACGAAGTGGGATGGGAGGCCATGCGGTGGCTCCGGGGAGTGAAAGGAGAAGTGGGGTTGGAGCATTTCCGGCTGCTACGGCGGGTGGGGAGCGGAGATATTGGGAATGTTTATTTATGTGAGATAAGGAATCCAATGGTGGGGTTGCCAAAGTGCTTTTATGCAATGAAAGTGGTTGATAGAGAAGCGGTTTGTGTGAGGAATAAAGAGAGAAGGGCAGATATGGAAAAGGAAATTTTGAAAGTGCTTGATCATCCTTTTTTGCCTACTCTTTATGCGGATTTTGAAGCTTCTCATTATTCTTGTTTGCTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTGCTCGCCAACGTCAACCCAATAAACGTTTCTCCATTTCTTCTGCTAAATTTTATGCGGCGGAGATAATTTTAGCTCTAGAGTATTTGCACATGATGGGCATAATTTACCGAGATTTAAAGCCGGAAAACGTTTTAGTTAGAGAAGACGGCCACATAATGCTCTCGGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCAAAGCTCATCCGTTGCCGGACCACCGCCTCCGACGTCACCACCGAACGCCACGTCAGATCCTACTCCACCTCAACCACCTCCTGCGCCGCCGCCCCCATTCAACCCGTCCTCTCCTGTTTCTCCATCGCCCGTCGCAAAAAATCCACCACCGTCACCACCATCACCGAACACGCCTCCGCCGCACCCGCCGCCGTGTACGGCGATGACAGCGACGGGGACGGCGAAGAATTCGACCCAGAACCAGAATTAATAGCGGAACCAATAAATGCTCGGTCGAAATCATTCGTTGGAACCCATGAGTATTTGGCGCCGGAGGTGATTTCCGGCCAAGGGCACGGCAGCGGTGTGGATTGGTGGACATTGGGAATATTCTTATACGAAATGTTGTACGGAAAGACACCATTTAAAGGGGAAAACAACGAGAAGACGTTAATGAACATTTTGAAGCAGCCATTAAGGTTTCCAAGAATTGGGTTTAGTAGCAGCAAAGAGTATGAAGAAATGGTGAAAGTTGAGGATTTAATCAAGAAGCTTTTGGTGAAAAATCCCAAAAAAAGAATTGGAAGTTTAAAGGGTTCAGTTGAAATCAAAAGACATGATTTTTTCAAAGGACTGAATTGGGCTTTAATTCGATCCGTACGACCTCCACAAATCCCAAACAATAACCTTAATTACTCCAAATACCCTTCTAACTACTTACCCAAATTGAGCAAGAAACAAAGACAACAACCTTACCAAATCCCTAATCACCATTTTGATTATTTCTAA | 1539 | 47.04 | MMAGSIGKDEWSDYDSSCSSSVTVPDSSRSWMSNLSFGSRRRSSSSAAEGGVEMNNTTTTTTTTLALQMMKPHKANEVGWEAMRWLRGVKGEVGLEHFRLLRRVGSGDIGNVYLCEIRNPMVGLPKCFYAMKVVDREAVCVRNKERRADMEKEILKVLDHPFLPTLYADFEASHYSCLLMEFCPGGDLYAARQRQPNKRFSISSAKFYAAEIILALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLIRCRTTASDVTTERHVRSYSTSTTSCAAAPIQPVLSCFSIARRKKSTTVTTITEHASAAPAAVYGDDSDGDGEEFDPEPELIAEPINARSKSFVGTHEYLAPEVISGQGHGSGVDWWTLGIFLYEMLYGKTPFKGENNEKTLMNILKQPLRFPRIGFSSSKEYEEMVKVEDLIKKLLVKNPKKRIGSLKGSVEIKRHDFFKGLNWALIRSVRPPQIPNNNLNYSKYPSNYLPKLSKKQRQQPYQIPNHHFDYF | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4933124 | 4935298 | - | CrPI670011_11g007730.1 | Cre11g0773 | 512518 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0773 | 512 | CDD | STKc_phototropin_like | 97 | 476 | - | - | |
Cre11g0773 | 512 | Gene3D | Transferase(Phosphotransferase) domain 1 | 187 | 254 | - | - | |
Cre11g0773 | 512 | Gene3D | Transferase(Phosphotransferase) domain 1 | 347 | 477 | - | - | |
Cre11g0773 | 512 | FunFam | protein kinase PINOID 2 | 96 | 182 | - | - | |
Cre11g0773 | 512 | FunFam | serine/threonine-protein kinase D6PK-like | 347 | 477 | - | - | |
Cre11g0773 | 512 | Gene3D | Phosphorylase Kinase; domain 1 | 96 | 186 | - | - | |
Cre11g0773 | 512 | Pfam | Protein kinase domain | 99 | 253 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0773 | 512 | Pfam | Protein kinase domain | 349 | 459 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0773 | 512 | PANTHER | FLIPPASE KINASE 1-RELATED | 18 | 494 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cre11g0773 | 512 | SUPERFAMILY | Protein kinase-like (PK-like) | 80 | 495 | IPR011009 | - | |
Cre11g0773 | 512 | SMART | serkin_6 | 98 | 459 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0773 | 512 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 224 | 236 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g0773 | 512 | FunFam | protein kinase PINOID | 183 | 251 | - | - | |
Cre11g0773 | 512 | MobiDBLite | consensus disorder prediction | 12 | 57 | - | - | |
Cre11g0773 | 512 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Cre11g0773 | 512 | ProSiteProfiles | Protein kinase domain profile. | 98 | 459 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g1087 | Cre-Chr3:10069486 | Cre11g0773 | Cre-Chr11:4933124 | 3.80E-108 | dispersed | |
Cre07g1427 | Cre-Chr7:29299355 | Cre11g0773 | Cre-Chr11:4933124 | 1.70E-92 | dispersed | |
Cre10g1529 | Cre-Chr10:29217918 | Cre11g0773 | Cre-Chr11:4933124 | 7.30E-114 | dispersed | |
Cre11g0773 | Cre-Chr11:4933124 | Cre05g0703 | Cre-Chr5:6210763 | 2.20E-21 | dispersed | |
Cre11g0773 | Cre-Chr11:4933124 | Cre04g1741 | Cre-Chr4:35499566 | 7.80E-115 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64531 | PF00069 | Pkinase | 3.30E-31 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0773 | K08286 | - | csv:101202905 | 855.899 |