Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0773 ATGATGGCCGGAAGCATAGGCAAAGACGAGTGGTCCGATTACGACAGTAGTTGCTCCTCCTCCGTAACCGTCCCAGACTCGAGCCGTAGCTGGATGAGCAACCTCAGCTTTGGAAGCCGGCGTCGCAGCAGTAGCTCAGCCGCAGAAGGCGGCGTGGAGATGAATAATACGACAACGACGACGACGACGACATTAGCATTACAAATGATGAAGCCACACAAGGCGAACGAAGTGGGATGGGAGGCCATGCGGTGGCTCCGGGGAGTGAAAGGAGAAGTGGGGTTGGAGCATTTCCGGCTGCTACGGCGGGTGGGGAGCGGAGATATTGGGAATGTTTATTTATGTGAGATAAGGAATCCAATGGTGGGGTTGCCAAAGTGCTTTTATGCAATGAAAGTGGTTGATAGAGAAGCGGTTTGTGTGAGGAATAAAGAGAGAAGGGCAGATATGGAAAAGGAAATTTTGAAAGTGCTTGATCATCCTTTTTTGCCTACTCTTTATGCGGATTTTGAAGCTTCTCATTATTCTTGTTTGCTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTGCTCGCCAACGTCAACCCAATAAACGTTTCTCCATTTCTTCTGCTAAATTTTATGCGGCGGAGATAATTTTAGCTCTAGAGTATTTGCACATGATGGGCATAATTTACCGAGATTTAAAGCCGGAAAACGTTTTAGTTAGAGAAGACGGCCACATAATGCTCTCGGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCAAAGCTCATCCGTTGCCGGACCACCGCCTCCGACGTCACCACCGAACGCCACGTCAGATCCTACTCCACCTCAACCACCTCCTGCGCCGCCGCCCCCATTCAACCCGTCCTCTCCTGTTTCTCCATCGCCCGTCGCAAAAAATCCACCACCGTCACCACCATCACCGAACACGCCTCCGCCGCACCCGCCGCCGTGTACGGCGATGACAGCGACGGGGACGGCGAAGAATTCGACCCAGAACCAGAATTAATAGCGGAACCAATAAATGCTCGGTCGAAATCATTCGTTGGAACCCATGAGTATTTGGCGCCGGAGGTGATTTCCGGCCAAGGGCACGGCAGCGGTGTGGATTGGTGGACATTGGGAATATTCTTATACGAAATGTTGTACGGAAAGACACCATTTAAAGGGGAAAACAACGAGAAGACGTTAATGAACATTTTGAAGCAGCCATTAAGGTTTCCAAGAATTGGGTTTAGTAGCAGCAAAGAGTATGAAGAAATGGTGAAAGTTGAGGATTTAATCAAGAAGCTTTTGGTGAAAAATCCCAAAAAAAGAATTGGAAGTTTAAAGGGTTCAGTTGAAATCAAAAGACATGATTTTTTCAAAGGACTGAATTGGGCTTTAATTCGATCCGTACGACCTCCACAAATCCCAAACAATAACCTTAATTACTCCAAATACCCTTCTAACTACTTACCCAAATTGAGCAAGAAACAAAGACAACAACCTTACCAAATCCCTAATCACCATTTTGATTATTTCTAA 1539 47.04 MMAGSIGKDEWSDYDSSCSSSVTVPDSSRSWMSNLSFGSRRRSSSSAAEGGVEMNNTTTTTTTTLALQMMKPHKANEVGWEAMRWLRGVKGEVGLEHFRLLRRVGSGDIGNVYLCEIRNPMVGLPKCFYAMKVVDREAVCVRNKERRADMEKEILKVLDHPFLPTLYADFEASHYSCLLMEFCPGGDLYAARQRQPNKRFSISSAKFYAAEIILALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLIRCRTTASDVTTERHVRSYSTSTTSCAAAPIQPVLSCFSIARRKKSTTVTTITEHASAAPAAVYGDDSDGDGEEFDPEPELIAEPINARSKSFVGTHEYLAPEVISGQGHGSGVDWWTLGIFLYEMLYGKTPFKGENNEKTLMNILKQPLRFPRIGFSSSKEYEEMVKVEDLIKKLLVKNPKKRIGSLKGSVEIKRHDFFKGLNWALIRSVRPPQIPNNNLNYSKYPSNYLPKLSKKQRQQPYQIPNHHFDYF 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4933124 4935298 - CrPI670011_11g007730.1 Cre11g0773 512518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0773 512 CDD STKc_phototropin_like 97 476 - -
Cre11g0773 512 Gene3D Transferase(Phosphotransferase) domain 1 187 254 - -
Cre11g0773 512 Gene3D Transferase(Phosphotransferase) domain 1 347 477 - -
Cre11g0773 512 FunFam protein kinase PINOID 2 96 182 - -
Cre11g0773 512 FunFam serine/threonine-protein kinase D6PK-like 347 477 - -
Cre11g0773 512 Gene3D Phosphorylase Kinase; domain 1 96 186 - -
Cre11g0773 512 Pfam Protein kinase domain 99 253 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0773 512 Pfam Protein kinase domain 349 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0773 512 PANTHER FLIPPASE KINASE 1-RELATED 18 494 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cre11g0773 512 SUPERFAMILY Protein kinase-like (PK-like) 80 495 IPR011009 -
Cre11g0773 512 SMART serkin_6 98 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0773 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0773 512 FunFam protein kinase PINOID 183 251 - -
Cre11g0773 512 MobiDBLite consensus disorder prediction 12 57 - -
Cre11g0773 512 MobiDBLite consensus disorder prediction 1 57 - -
Cre11g0773 512 ProSiteProfiles Protein kinase domain profile. 98 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1087 Cre-Chr3:10069486 Cre11g0773 Cre-Chr11:4933124 3.80E-108 dispersed
Cre07g1427 Cre-Chr7:29299355 Cre11g0773 Cre-Chr11:4933124 1.70E-92 dispersed
Cre10g1529 Cre-Chr10:29217918 Cre11g0773 Cre-Chr11:4933124 7.30E-114 dispersed
Cre11g0773 Cre-Chr11:4933124 Cre05g0703 Cre-Chr5:6210763 2.20E-21 dispersed
Cre11g0773 Cre-Chr11:4933124 Cre04g1741 Cre-Chr4:35499566 7.80E-115 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64531 PF00069 Pkinase 3.30E-31 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0773 K08286 - csv:101202905 855.899