Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0808 ATGGAGGAAAATGAAAACTGTGGCTGTTGGGCTGTCCTTAAACGCACCGTTTCAGATGTCTCCAAATCTTCCCCTTCTTCCAAACATTCCCCCAACTCCATTCCTCGCCTTACCTTACTTTACGATTCAGCTACCGAGACCCGATATTTAAACGCAAGCGACCGAGATTTGTGTGCGCCGGCCGAAGCTCGGCTATCCTTCGACAATGCTCCGCCGCTGCCGCCGACGAGGTTAGAGGACAAATTTAAACGCCAGTTACTGAAATTTTCATTTCAGGAACTAAGATCGGCGACCGGAAATTTCCGGCCAGATAGCATTCTGGGAGAAGGAGGGTTTGGATTCGTTTTCAAAGGATGGATTGAAGAGAATGGGACGGCGCCGGCCAAACCTGGATCAGGAATCACAGTCGCCGTCAAAAGCTTGAAACCGGATGGTCTTCAAGGACACAGAGAATGGGAGGCTGAGGTTAGCTTTCTTGGACAGCTTCACCATCCCAATCTTGTTAAACTTATTGGGTACTGTATTGAAGATGATCAAAGGCTTCTTGTATATGAATTTATGACGCGTGGTAGTCTTGAAAACCATCTTTTCAGAAGGACTATACCTCTTCCATGGTCAAACAGGATTAAAATTGCACTTGCTGCAGCCAAAGGCTTGGCCTTCCTCCACAATGGTCCGGAACCTGTCATATATAGAGATTTCAAAACATCAAACATATTGCTTGATACAGAGTACAATGCGAAGCTTTCGGATTTTGGTTTGGCAAAGGCTGGGCCTCAAGGAGACAAAACACATGTTTCCACCAGAGTAGTTGGAACATATGGCTATGCTGCGCCAGAATATCTAATGACAGGGCATTTGACATCAAAGAGTGATGTCTATAGCTTCGGCGTTGTCCTACTCGAGATCTTAACGGGGAGGAGATCAATGGACAAGAAACGTCCAAGTGGTGAGCAGAACCTAGTGTCATGGGCTCGACCATATTTAGATGACAAAAGGAAGCTTTACCATATAGTGGACCCTCGCTTGGAGCTTAACTACTCCATCCAGGGGGTTCAAAAAGTCTCTCGACTAGCTTCTCACTGCATCAGTAGAGATCCAAAATCTCGTCCTACCATGGATGAAGTTGTCAAGGTTCTCATTCCACTACAAGATCTTAACGACCTTGCCATCCTAGCATATCATTCACGCCTGTCTCAGCAAGGTCGACGAAAGAAGAAATCAGATGGACTACACCAGTTAACATACACCCAGTCAAGAAATATTAGAACCTCTCCTTTGAATGTTGGAGTTCATCGTCGTCGGTAA 1308 45.87 MEENENCGCWAVLKRTVSDVSKSSPSSKHSPNSIPRLTLLYDSATETRYLNASDRDLCAPAEARLSFDNAPPLPPTRLEDKFKRQLLKFSFQELRSATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWEAEVSFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALAAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYLMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLDDKRKLYHIVDPRLELNYSIQGVQKVSRLASHCISRDPKSRPTMDEVVKVLIPLQDLNDLAILAYHSRLSQQGRRKKKSDGLHQLTYTQSRNIRTSPLNVGVHRRR 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5328199 5334691 - CrPI670011_11g008080.1 Cre11g0808 512553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0808 435 ProSitePatterns Protein kinases ATP-binding region signature. 107 139 IPR017441 GO:0005524(InterPro)
Cre11g0808 435 FunFam Serine/threonine-protein kinase BIK1 73 186 - -
Cre11g0808 435 CDD STKc_IRAK 107 383 - -
Cre11g0808 435 PANTHER OS01G0588500 PROTEIN-RELATED 80 384 IPR050823 -
Cre11g0808 435 FunFam Probable serine/threonine-protein kinase PBL8 187 400 - -
Cre11g0808 435 Gene3D Transferase(Phosphotransferase) domain 1 187 395 - -
Cre11g0808 435 ProSiteProfiles Protein kinase domain profile. 101 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0808 435 SUPERFAMILY Protein kinase-like (PK-like) 84 383 IPR011009 -
Cre11g0808 435 Pfam Protein tyrosine and serine/threonine kinase 105 380 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0808 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0808 435 Gene3D Phosphorylase Kinase; domain 1 75 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0622 Cre-Chr1:5517637 Cre11g0808 Cre-Chr11:5328199 1.60E-141 dispersed
Cre08g0836 Cre-Chr8:21449392 Cre11g0808 Cre-Chr11:5328199 7.40E-113 dispersed
Cre09g1225 Cre-Chr9:14984005 Cre11g0808 Cre-Chr11:5328199 1.60E-90 dispersed
Cre10g0286 Cre-Chr10:1748411 Cre11g0808 Cre-Chr11:5328199 1.50E-97 dispersed
Cre10g0461 Cre-Chr10:3630291 Cre11g0808 Cre-Chr11:5328199 1.80E-82 dispersed
Cre10g2375 Cre-Chr10:37826383 Cre11g0808 Cre-Chr11:5328199 4.10E-55 dispersed
Cre11g0808 Cre-Chr11:5328199 Cre11g1560 Cre-Chr11:25254329 6.00E-108 dispersed
Cre11g0808 Cre-Chr11:5328199 Cre05g0232 Cre-Chr5:2214244 3.40E-47 wgd
Cre11g0808 Cre-Chr11:5328199 Cre06g2002 Cre-Chr6:27557887 6.90E-197 wgd
Cre11g0808 Cre-Chr11:5328199 Cre08g1301 Cre-Chr8:26089121 4.30E-61 wgd
Cre11g0808 Cre-Chr11:5328199 Cre09g0304 Cre-Chr9:2962938 1.40E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64532 PF07714 PK_Tyr_Ser-Thr 8.60E-49 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0808 - - - 0.0