Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0834 | ATGCTGGGCGCGTTGGGACACGCGCCTTTCATCTATTTTCTCTCTGCTTTTCCTCCTCCCTCCTCTGTTCCAAATCCCAACCTTCCTCGCTTCTCTCTAATGGCTATCTCTTCTCGAATTGCCGTCGTCGGCGACGTCCATGGGCATTGGGATTTACGAGAAGATTCCAAGGGACTTCAACTATTGCAGCCAGATTTAGTGCTCTTTACAGGTGACTTTGGCGAAGAGAATGTTGAACTGGTCCAAAGTATTGCAGATCTTAAATTTGCAAAAGCAGCTATATTGGGAAACCATGATGCTTGGTTTACACCGTGTTTTTCTCACGAGAAAAAGGATGGCGTTCAACTTCAGTTGGAATGTCTTGGCGAGAGTCATATTGGTTACCGACGTATGGACTTTCCTCGGCAAAAACTAAGCATTGTTGGTGGACGACCTTTTTCTCATGGTGGAAAGGGGATGTTTCGGAGACAACTACTTTCTGCAAGATATGGTGTCAAAGACATGAAAACAAGTGCTAAGAGAATATATGAAGCTGCGATAGGCGCACCCGAGGATCATTTGGTTATAATTCTTGCACACAATGGGCCTACAGGTCTTGGTTCTTGTGCAAATGACATTTGTGGAAAAGATTGGGAATTTGGAGGTGGAGACTATGGTGATGAAGATCTAGCACAAGCCATATCTCAGTTGAAAGAGAATGGAAAGTTTCATGTCCCTCCTTTGGTTGTGTTCGGGCATATGCATAAAGAACTCGCATACGGTGGTCATCGTAAAATGATAGTCGTTACAGCTGACAACACCATTTACCTTAATGGAGCTGTCGTTCCGAGGGTTAACAGTTACTCCGGCGAAGAAGGCAAGGTAAAAGGAAACTTCACAAGTACCGGAACCTCGTCTTCGCAATCTGTTTCAAGAGGCACAAAGCGAGCATTCACTGTAGTTGACATTTCAGATAGGAAGGTGGATAAGATTACTGAAAGTTGGATTTCTGTTGTTGGTGATGAGATCTGCTTGGATGAAGCACGTTTGATTTATCAAAGTGGAATTGAAGCAAAAAGGAAAATTTGGTATAATACACAAACCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGGAGGAGGAGGAAGGGAGATTGAAATTTAAGCTTTGTTTTTTTGGGCCTTGTTCTTCTTGTGGGTCGTTTGCTTTTTTTATGTTCACCATGACTGTGGAGGTTGGAAGGGCTAATTTGGTGGGTGAAAATGAGGATATGGATCAATTTCCTATTGGTATGCGTATTCTTGCTGTGGATGATGACCCCATTTGCCTTAAGGTTTTGGAGAATTTGCTTCGTAAATGCCAATATCATGTTACAACAACCAATCAGGCGGTTCAGGCACTTAATATGTTGAGGGAGAACAAAAACAGGTTTGACCTGGTTATCAGCGATGTTAACATGCCAGACATGGATGGTTTTAAGCTCCTTGAGCTAGTAGGCCTTGAAATGGACCTACCTGTTATCATGTTGTCTGCGCATAGCAATACCGAACTTGTAAAGAAGGGAGTTATTCATGGGGCGTGTGACTATTTGCTGAAACCTGTTCGAATTGAAGAATTGAAGAATATATGGCAACATGTCCTTCGGAGAAAGAAGCCTTCTGCTAAGAACCAAAATAAGTGCACTAATGGAAATAACACGAGTCAAAGTGTTGAAGGTGCAAAAGGTTTCCCACCTGCAATCAGTACTGATAATGAGAAACCTGGTAAAAGGCAAAAAGACCAGGACGACGACGAGGAAGGAGGTGAAGAAGACAGTACTTATGAGAATGATGACTCCTCAACCCAAAAAAAGCCAAGGGTAAATTGGTATGACGGAGATGAAAATTTGCACAGGAAGTTTGTGGCAGCTGTTAACTTTTTGGGCTATGAAAAGGCTGTTCCTAAGAAGATACTTGATCTGATGAATGTTGAAGGACTTACAAGAGAAAATGTGGCCAGCCATCTTCAGAAATACAGACAATACCTTAAAAAACTGTGTAGTGAGGAAGCTCAGCAATGTAACGTGATGGGTGCATTTGGAGGTAAACAAACCTCCTTCAGGCCCATGGCTTCACTCAATGGATTTTCAATGACTGGAACAGGAAGGCTCTCAAATGCTACATTCTCGCCGTATCCCTCTCAAGAAATAGTTGGTCAATTAAACTCTACTTCTGGATTGAGTTTACATGGAATTGCTTCCTCTGGAATGTTCCAGTCCCATAAATTGAGTAGCTCATTAAATACCGTTGGGAAATCCCATCCAGCTTTCTTGCTTGCCAACCAACCTCCACACACATTCAATGGTATTTCAATGTCATCGGATCACATCCAGTTGCATCAGGATAAATGCACTCTGTCATTCAAAGAGTCTAATTCGATAAATGATGCCTCAAGTTTTACTGTTTCCACCAGCTTCCCTGATGCTAGAATGGCTGTTGGTAGCTCAAGCACTTATGATTTCGGTTCGAGCCATTTGTTGATGTTACGAGGACAGAAGCAACAGATTCAAGGTGGTGGAGAATTTGGAGGTCAGTCTTCTCTTAAGGTAACTCTAGACAACCCAGAACCGTTGGCAAACGGCACAGGTGTTTCTAATATTTTGGGCCATGGTGAGTCTAACAAAAACTGGCCGGGATCAATCCAGCTGCCCAAGTTTTCATCTAATGTCTCAGTCACTGGAATTTACCCTCCTGCTGGAATGCCTGCTACTTATTTGACAATTTCCTCGGCTCAGCCTGATAACGACAACTTTCCTGTTGGTTTTCCTTCAACAAGTGTGGATTCAAGTTCTCAGCTTGATTTAAGAGGGGACACACAATGCTATGAAGAACTAATTGGTAGTGTTGTTGAAGCCATGAATGGAAGATCAAAACAACAATGGGATGCAGCTAAACAGGATTATTATGGCAACCATAATTCCATTGTGAGAGACTCTCTAGTTTCTGGGAATAGTGTTGTAGATCCCTTGAACCAGATTGCAAATCAGAACAATGCAATCTGTCTAGAAAACATTGGAAGCTCTTCGACTAACCAATTGAATGATGGTGCTCCAACCTTCATTCACGATGGTGCGGAAATATCTGCAATGGACACTTGGATGAACTACGATGGAAAAATTCTCATGGATCACACGAAGCTACAAAGTGGATTTGCAAATTCTAGTTTTAATTCCTTGGATGAATTGGTTAATGCTCTGTCAAAACAGGATCAAGATCAATCCATTCAAATAAATGACGAATTTGGATTTGATGCCCAATCTCTCGGATGGATCGTTGGAATTTCATGTAGCTTTATTTCACTGAACCTTGATGGCAATGCGAAAATTTTAGCAGACAGCAAGCTGAAAACTCCCAATATGCAAAAGTGGTAA | 3396 | 42.05 | MLGALGHAPFIYFLSAFPPPSSVPNPNLPRFSLMAISSRIAVVGDVHGHWDLREDSKGLQLLQPDLVLFTGDFGEENVELVQSIADLKFAKAAILGNHDAWFTPCFSHEKKDGVQLQLECLGESHIGYRRMDFPRQKLSIVGGRPFSHGGKGMFRRQLLSARYGVKDMKTSAKRIYEAAIGAPEDHLVIILAHNGPTGLGSCANDICGKDWEFGGGDYGDEDLAQAISQLKENGKFHVPPLVVFGHMHKELAYGGHRKMIVVTADNTIYLNGAVVPRVNSYSGEEGKVKGNFTSTGTSSSQSVSRGTKRAFTVVDISDRKVDKITESWISVVGDEICLDEARLIYQSGIEAKRKIWYNTQTQKKKKKKKKKKKEEEEEGRLKFKLCFFGPCSSCGSFAFFMFTMTVEVGRANLVGENEDMDQFPIGMRILAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALNMLRENKNRFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSNTELVKKGVIHGACDYLLKPVRIEELKNIWQHVLRRKKPSAKNQNKCTNGNNTSQSVEGAKGFPPAISTDNEKPGKRQKDQDDDEEGGEEDSTYENDDSSTQKKPRVNWYDGDENLHRKFVAAVNFLGYEKAVPKKILDLMNVEGLTRENVASHLQKYRQYLKKLCSEEAQQCNVMGAFGGKQTSFRPMASLNGFSMTGTGRLSNATFSPYPSQEIVGQLNSTSGLSLHGIASSGMFQSHKLSSSLNTVGKSHPAFLLANQPPHTFNGISMSSDHIQLHQDKCTLSFKESNSINDASSFTVSTSFPDARMAVGSSSTYDFGSSHLLMLRGQKQQIQGGGEFGGQSSLKVTLDNPEPLANGTGVSNILGHGESNKNWPGSIQLPKFSSNVSVTGIYPPAGMPATYLTISSAQPDNDNFPVGFPSTSVDSSSQLDLRGDTQCYEELIGSVVEAMNGRSKQQWDAAKQDYYGNHNSIVRDSLVSGNSVVDPLNQIANQNNAICLENIGSSSTNQLNDGAPTFIHDGAEISAMDTWMNYDGKILMDHTKLQSGFANSSFNSLDELVNALSKQDQDQSIQINDEFGFDAQSLGWIVGISCSFISLNLDGNAKILADSKLKTPNMQKW | 1131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5529015 | 5545334 | - | CrPI670011_11g008340.1 | Cre11g0834 | 512579 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0834 | 1131 | SMART | REC_2 | 427 | 539 | IPR001789 | GO:0000160(InterPro) | |
Cre11g0834 | 1131 | CDD | REC_typeB_ARR-like | 429 | 543 | - | - | |
Cre11g0834 | 1131 | Coils | Coil | 357 | 378 | - | - | |
Cre11g0834 | 1131 | MobiDBLite | consensus disorder prediction | 544 | 618 | - | - | |
Cre11g0834 | 1131 | SUPERFAMILY | CheY-like | 426 | 552 | IPR011006 | - | |
Cre11g0834 | 1131 | CDD | MPP_NostocDevT-like | 38 | 277 | IPR027629 | - | |
Cre11g0834 | 1131 | SUPERFAMILY | Metallo-dependent phosphatases | 39 | 270 | IPR029052 | - | |
Cre11g0834 | 1131 | Pfam | Response regulator receiver domain | 429 | 537 | IPR001789 | GO:0000160(InterPro) | |
Cre11g0834 | 1131 | NCBIfam | TIGR04168 family protein | 59 | 292 | IPR027629 | - | |
Cre11g0834 | 1131 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 613 | 669 | IPR006447 | GO:0003677(InterPro) | |
Cre11g0834 | 1131 | Gene3D | - | 427 | 577 | - | - | |
Cre11g0834 | 1131 | PANTHER | CALCINEURIN-LIKE METALLO-PHOSPHOESTERASE SUPERFAMILY PROTEIN | 30 | 348 | IPR027629 | - | |
Cre11g0834 | 1131 | MobiDBLite | consensus disorder prediction | 552 | 568 | - | - | |
Cre11g0834 | 1131 | ProSiteProfiles | Response regulatory domain profile. | 428 | 543 | IPR001789 | GO:0000160(InterPro) | |
Cre11g0834 | 1131 | FunFam | Two-component response regulator | 609 | 675 | - | - | |
Cre11g0834 | 1131 | Pfam | Calcineurin-like phosphoesterase | 39 | 249 | IPR004843 | GO:0016787(InterPro) | |
Cre11g0834 | 1131 | Gene3D | - | 609 | 675 | - | - | |
Cre11g0834 | 1131 | SUPERFAMILY | Homeodomain-like | 611 | 673 | IPR009057 | - | |
Cre11g0834 | 1131 | Gene3D | - | 35 | 327 | IPR029052 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g2086 | Cre-Chr6:28618326 | Cre11g0834 | Cre-Chr11:5529015 | 3.50E-148 | dispersed | |
Cre06g2198 | Cre-Chr6:29791254 | Cre11g0834 | Cre-Chr11:5529015 | 3.70E-45 | dispersed | |
Cre06g2200 | Cre-Chr6:29809250 | Cre11g0834 | Cre-Chr11:5529015 | 1.30E-48 | dispersed | |
Cre08g1683 | Cre-Chr8:29248526 | Cre11g0834 | Cre-Chr11:5529015 | 2.50E-64 | dispersed | |
Cre09g0522 | Cre-Chr9:4911764 | Cre11g0834 | Cre-Chr11:5529015 | 3.90E-21 | dispersed | |
Cre09g1194 | Cre-Chr9:14108136 | Cre11g0834 | Cre-Chr11:5529015 | 2.90E-21 | dispersed | |
Cre09g1935 | Cre-Chr9:38182481 | Cre11g0834 | Cre-Chr11:5529015 | 1.20E-21 | dispersed | |
Cre09g2496 | Cre-Chr9:44218898 | Cre11g0834 | Cre-Chr11:5529015 | 3.70E-19 | dispersed | |
Cre10g0445 | Cre-Chr10:3420046 | Cre11g0834 | Cre-Chr11:5529015 | 3.70E-18 | dispersed | |
Cre10g1770 | Cre-Chr10:32074803 | Cre11g0834 | Cre-Chr11:5529015 | 3.00E-15 | dispersed | |
Cre11g0834 | Cre-Chr11:5529015 | Cre01g1541 | Cre-Chr1:28617391 | 1.80E-15 | dispersed | |
Cre11g0834 | Cre-Chr11:5529015 | Cre05g1811 | Cre-Chr5:30211195 | 1.80E-108 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54658 | PF00149 | Metallophos | 1.40E-09 | CL0163 | Cre | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0834 | K14491 | - | csv:101203718 | 1190.64 |