Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0934 ATGAATATAGCGAAACAAGAAGGAAGGCAATGGCAGAATAATCGGAGAAGAAGAGTTTCCCAGCGCCGCCGTTGTCCTTTTTGGAGCACCGGTCAGAGTTTCTCCGGCACTATTCAGACCACTACTCCTTTGCCGGAAACTCTACTAATGTCTTCTTCATCCGATCCTCCTTCCCCTTCTTCTTCTGATTCCGATCCCTCTAATCCCCCTCCTTCTCCACCTCCTTCCACTGCGCCGCCTCCCGATGCTTCTCCGCCTCCCCCGGATTCCTCCTCCTCCTCTCCTCCTCCGCCGGATTCTTCTCCTCCTCCTCCACCCGATGCTTCTTCTCCACCTCCGCCAGATGCATCCCCGCCGCCGCCTAACGACTCCTCCCCGCCTCCTGGTGATTCCTCTTCTTCACCGCCACCGCCGAAGGATTCCAACTCTAATTCTCCTCCGTCGCCGCCGCCTCCTCCACCACCACCACCACCGCCGCCGCCGCCTCCTCCGCCGCGTGGATCCTCAAGGCATTCTCCTCCGCCTCCGAGATCGATCGACTCAGGATCCTCAGACTCCTCGTCCGGCGGTTCCGCTCCCCAGGCGGTGCCGATCATTGTAGGAGTGGCGGTGGCGGCAGGGTTTTTGCTTTTCGCCATGGCCTTGATATTCTTCGCTTGCACCCGAAAGAAAAAGAAGCAAAATAGTAATTCCATGTATTTCGATGAACAGTCCGGTCCGAAAGGTGGGGATCCATATTACAACGGAAGGAATCACAACTGGAACAACCCGAGCGAACATTTCGTGAACATGGCGCCAATCAGCGGCGGAACCCAAGGAGGAGGGTGGCCATCGCCGCCGCCGCCTCCTCCGCCGGGATTATTGAGCAGTGATATGAGCTCGAATTTCTCAGGGCCACATGGGCCACCGTTGCCGCCGCCGCACCCATCGGTGGCTCTGGGGTTCAATAAGAGCACTTTCACGTACGACGAGCTGATGGCGGCAACCTCGGGATTCTCTCCGGCGAATCTGTTGGGGCAAGGAGGATTCGGGTATGTTCATAAAGGACTACTGCCCAACGGCAAGGAAATTGCAGTGAAAAGCCTGAAAACGGGAAGCGGGCAAGGAGATCGAGAATTTGCGGCCGAGGTGGAGATCATCAGCCGCGTTCACCACCGCCATTTGGTGTCCCTTGTCGGGTATTGTATCGCCGGTGACCGGAAGATGTTGGTTTACGAATTTGTCCCTAATAACAACCTCGAATTCCACCTTCACGGCAAGGGGCGGCCACCATTGGACTGGTCGACGAGAATGAAGATCGCATTGGGCTCAGCCAAGGGCCTAGCCTATCTCCACGAAGACTGCCATCCTCGCATTATCCACAGAGATATCAAGACTGCCAATATTCTTATAGACATGAGTTTCGAGGCTAAGGTGGCTGATTTTGGATTGGCGAAGCTCAACCAAGACAATTACACTCATGTATCGACTCGCGTCATGGGCACATTTGGATATTTGGCTCCGGAGTATGCATCAAGTGGGAAGCTAACGGAGAAATCAGATATATTCTCATTTGGAGTAATGCTTTTGGAGCTGATTACCGGAAGACGACCGGTGGACACGGCCGGGGAAATGGAAGACAGCTTAGTGGACTGGTCAAGGCCTCTTTGTGTGAAAGCAATGAGTGATGGAAACTATGATGAGTTGGCTGATTCACGGTTAGAGAAGAACTATGATGTCCAAGAAATGGCTTGCATGGTGGCTTGCGCCGCCGCTTGCATTCGCCATTCGGCTCGGCGCCGTCCCAAAATGAGCCAGGTGGTACGAGCATTGGAAGGCGATGTGTCGCTGGATGACTTGAACGATGGAGTAAAGCCAGGGCAAAGCTCATACTTCGGGTCCGGCACGTCCTCGGAGTACGACGCAAGCTCCTATAGTGCCGACATGAAGAGGTTCCGAAAGGTGGCGTTGGACAGCCGCGAGTACGCAAGCAGCGATTATGGCGGCACTAGCGAGTACGGCCTAAACCCTTCCTCAACAAGCAGCGAAATGAGTCGGAAGCCTAGTCGTTTATCCTCCCCCGATGCACCCCCCTCACATTCTTAA 2085 54.87 MNIAKQEGRQWQNNRRRRVSQRRRCPFWSTGQSFSGTIQTTTPLPETLLMSSSSDPPSPSSSDSDPSNPPPSPPPSTAPPPDASPPPPDSSSSSPPPPDSSPPPPPDASSPPPPDASPPPPNDSSPPPGDSSSSPPPPKDSNSNSPPSPPPPPPPPPPPPPPPPPRGSSRHSPPPPRSIDSGSSDSSSGGSAPQAVPIIVGVAVAAGFLLFAMALIFFACTRKKKKQNSNSMYFDEQSGPKGGDPYYNGRNHNWNNPSEHFVNMAPISGGTQGGGWPSPPPPPPPGLLSSDMSSNFSGPHGPPLPPPHPSVALGFNKSTFTYDELMAATSGFSPANLLGQGGFGYVHKGLLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGDRKMLVYEFVPNNNLEFHLHGKGRPPLDWSTRMKIALGSAKGLAYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDIFSFGVMLLELITGRRPVDTAGEMEDSLVDWSRPLCVKAMSDGNYDELADSRLEKNYDVQEMACMVACAAACIRHSARRRPKMSQVVRALEGDVSLDDLNDGVKPGQSSYFGSGTSSEYDASSYSADMKRFRKVALDSREYASSDYGGTSEYGLNPSSTSSEMSRKPSRLSSPDAPPSHS 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6612529 6618729 - CrPI670011_11g009340.1 Cre11g0934 512679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0934 694 ProSiteProfiles Protein kinase domain profile. 332 610 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0934 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0934 694 MobiDBLite consensus disorder prediction 657 694 - -
Cre11g0934 694 FunFam Proline-rich receptor-like protein kinase PERK1 408 615 - -
Cre11g0934 694 MobiDBLite consensus disorder prediction 62 172 - -
Cre11g0934 694 MobiDBLite consensus disorder prediction 174 193 - -
Cre11g0934 694 MobiDBLite consensus disorder prediction 25 61 - -
Cre11g0934 694 MobiDBLite consensus disorder prediction 611 636 - -
Cre11g0934 694 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524(InterPro)
Cre11g0934 694 MobiDBLite consensus disorder prediction 620 636 - -
Cre11g0934 694 Pfam Protein tyrosine and serine/threonine kinase 337 604 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g0934 694 Gene3D Transferase(Phosphotransferase) domain 1 408 615 - -
Cre11g0934 694 MobiDBLite consensus disorder prediction 1 193 - -
Cre11g0934 694 SMART serkin_6 332 604 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g0934 694 MobiDBLite consensus disorder prediction 226 306 - -
Cre11g0934 694 FunFam proline-rich receptor-like protein kinase PERK1 310 407 - -
Cre11g0934 694 Gene3D Phosphorylase Kinase; domain 1 309 407 - -
Cre11g0934 694 SUPERFAMILY Protein kinase-like (PK-like) 307 604 IPR011009 -
Cre11g0934 694 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 167 648 IPR047117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1669 Cre-Chr6:13440115 Cre11g0934 Cre-Chr11:6612529 2.40E-158 dispersed
Cre11g0731 Cre-Chr11:4424489 Cre11g0934 Cre-Chr11:6612529 1.40E-161 dispersed
Cre11g0934 Cre-Chr11:6612529 Cre11g1014 Cre-Chr11:7454804 4.70E-123 dispersed
Cre11g0930 Cre-Chr11:6569863 Cre11g0934 Cre-Chr11:6612529 2.30E-37 proximal
Cre05g2726 Cre-Chr5:38124533 Cre11g0934 Cre-Chr11:6612529 7.10E-54 transposed
Cre07g1280 Cre-Chr7:26841955 Cre11g0934 Cre-Chr11:6612529 9.30E-171 transposed
Cre08g1089 Cre-Chr8:23989463 Cre11g0934 Cre-Chr11:6612529 2.30E-50 transposed
Cre11g0934 Cre-Chr11:6612529 Cre05g2105 Cre-Chr5:32934522 2.40E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64536 PF07714 PK_Tyr_Ser-Thr 2.60E-46 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0934 - - - 0.0