Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0934 | ATGAATATAGCGAAACAAGAAGGAAGGCAATGGCAGAATAATCGGAGAAGAAGAGTTTCCCAGCGCCGCCGTTGTCCTTTTTGGAGCACCGGTCAGAGTTTCTCCGGCACTATTCAGACCACTACTCCTTTGCCGGAAACTCTACTAATGTCTTCTTCATCCGATCCTCCTTCCCCTTCTTCTTCTGATTCCGATCCCTCTAATCCCCCTCCTTCTCCACCTCCTTCCACTGCGCCGCCTCCCGATGCTTCTCCGCCTCCCCCGGATTCCTCCTCCTCCTCTCCTCCTCCGCCGGATTCTTCTCCTCCTCCTCCACCCGATGCTTCTTCTCCACCTCCGCCAGATGCATCCCCGCCGCCGCCTAACGACTCCTCCCCGCCTCCTGGTGATTCCTCTTCTTCACCGCCACCGCCGAAGGATTCCAACTCTAATTCTCCTCCGTCGCCGCCGCCTCCTCCACCACCACCACCACCGCCGCCGCCGCCTCCTCCGCCGCGTGGATCCTCAAGGCATTCTCCTCCGCCTCCGAGATCGATCGACTCAGGATCCTCAGACTCCTCGTCCGGCGGTTCCGCTCCCCAGGCGGTGCCGATCATTGTAGGAGTGGCGGTGGCGGCAGGGTTTTTGCTTTTCGCCATGGCCTTGATATTCTTCGCTTGCACCCGAAAGAAAAAGAAGCAAAATAGTAATTCCATGTATTTCGATGAACAGTCCGGTCCGAAAGGTGGGGATCCATATTACAACGGAAGGAATCACAACTGGAACAACCCGAGCGAACATTTCGTGAACATGGCGCCAATCAGCGGCGGAACCCAAGGAGGAGGGTGGCCATCGCCGCCGCCGCCTCCTCCGCCGGGATTATTGAGCAGTGATATGAGCTCGAATTTCTCAGGGCCACATGGGCCACCGTTGCCGCCGCCGCACCCATCGGTGGCTCTGGGGTTCAATAAGAGCACTTTCACGTACGACGAGCTGATGGCGGCAACCTCGGGATTCTCTCCGGCGAATCTGTTGGGGCAAGGAGGATTCGGGTATGTTCATAAAGGACTACTGCCCAACGGCAAGGAAATTGCAGTGAAAAGCCTGAAAACGGGAAGCGGGCAAGGAGATCGAGAATTTGCGGCCGAGGTGGAGATCATCAGCCGCGTTCACCACCGCCATTTGGTGTCCCTTGTCGGGTATTGTATCGCCGGTGACCGGAAGATGTTGGTTTACGAATTTGTCCCTAATAACAACCTCGAATTCCACCTTCACGGCAAGGGGCGGCCACCATTGGACTGGTCGACGAGAATGAAGATCGCATTGGGCTCAGCCAAGGGCCTAGCCTATCTCCACGAAGACTGCCATCCTCGCATTATCCACAGAGATATCAAGACTGCCAATATTCTTATAGACATGAGTTTCGAGGCTAAGGTGGCTGATTTTGGATTGGCGAAGCTCAACCAAGACAATTACACTCATGTATCGACTCGCGTCATGGGCACATTTGGATATTTGGCTCCGGAGTATGCATCAAGTGGGAAGCTAACGGAGAAATCAGATATATTCTCATTTGGAGTAATGCTTTTGGAGCTGATTACCGGAAGACGACCGGTGGACACGGCCGGGGAAATGGAAGACAGCTTAGTGGACTGGTCAAGGCCTCTTTGTGTGAAAGCAATGAGTGATGGAAACTATGATGAGTTGGCTGATTCACGGTTAGAGAAGAACTATGATGTCCAAGAAATGGCTTGCATGGTGGCTTGCGCCGCCGCTTGCATTCGCCATTCGGCTCGGCGCCGTCCCAAAATGAGCCAGGTGGTACGAGCATTGGAAGGCGATGTGTCGCTGGATGACTTGAACGATGGAGTAAAGCCAGGGCAAAGCTCATACTTCGGGTCCGGCACGTCCTCGGAGTACGACGCAAGCTCCTATAGTGCCGACATGAAGAGGTTCCGAAAGGTGGCGTTGGACAGCCGCGAGTACGCAAGCAGCGATTATGGCGGCACTAGCGAGTACGGCCTAAACCCTTCCTCAACAAGCAGCGAAATGAGTCGGAAGCCTAGTCGTTTATCCTCCCCCGATGCACCCCCCTCACATTCTTAA | 2085 | 54.87 | MNIAKQEGRQWQNNRRRRVSQRRRCPFWSTGQSFSGTIQTTTPLPETLLMSSSSDPPSPSSSDSDPSNPPPSPPPSTAPPPDASPPPPDSSSSSPPPPDSSPPPPPDASSPPPPDASPPPPNDSSPPPGDSSSSPPPPKDSNSNSPPSPPPPPPPPPPPPPPPPPRGSSRHSPPPPRSIDSGSSDSSSGGSAPQAVPIIVGVAVAAGFLLFAMALIFFACTRKKKKQNSNSMYFDEQSGPKGGDPYYNGRNHNWNNPSEHFVNMAPISGGTQGGGWPSPPPPPPPGLLSSDMSSNFSGPHGPPLPPPHPSVALGFNKSTFTYDELMAATSGFSPANLLGQGGFGYVHKGLLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGDRKMLVYEFVPNNNLEFHLHGKGRPPLDWSTRMKIALGSAKGLAYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDIFSFGVMLLELITGRRPVDTAGEMEDSLVDWSRPLCVKAMSDGNYDELADSRLEKNYDVQEMACMVACAAACIRHSARRRPKMSQVVRALEGDVSLDDLNDGVKPGQSSYFGSGTSSEYDASSYSADMKRFRKVALDSREYASSDYGGTSEYGLNPSSTSSEMSRKPSRLSSPDAPPSHS | 694 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6612529 | 6618729 | - | CrPI670011_11g009340.1 | Cre11g0934 | 512679 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0934 | 694 | ProSiteProfiles | Protein kinase domain profile. | 332 | 610 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0934 | 694 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 452 | 464 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g0934 | 694 | MobiDBLite | consensus disorder prediction | 657 | 694 | - | - | |
Cre11g0934 | 694 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 408 | 615 | - | - | |
Cre11g0934 | 694 | MobiDBLite | consensus disorder prediction | 62 | 172 | - | - | |
Cre11g0934 | 694 | MobiDBLite | consensus disorder prediction | 174 | 193 | - | - | |
Cre11g0934 | 694 | MobiDBLite | consensus disorder prediction | 25 | 61 | - | - | |
Cre11g0934 | 694 | MobiDBLite | consensus disorder prediction | 611 | 636 | - | - | |
Cre11g0934 | 694 | ProSitePatterns | Protein kinases ATP-binding region signature. | 338 | 360 | IPR017441 | GO:0005524(InterPro) | |
Cre11g0934 | 694 | MobiDBLite | consensus disorder prediction | 620 | 636 | - | - | |
Cre11g0934 | 694 | Pfam | Protein tyrosine and serine/threonine kinase | 337 | 604 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g0934 | 694 | Gene3D | Transferase(Phosphotransferase) domain 1 | 408 | 615 | - | - | |
Cre11g0934 | 694 | MobiDBLite | consensus disorder prediction | 1 | 193 | - | - | |
Cre11g0934 | 694 | SMART | serkin_6 | 332 | 604 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0934 | 694 | MobiDBLite | consensus disorder prediction | 226 | 306 | - | - | |
Cre11g0934 | 694 | FunFam | proline-rich receptor-like protein kinase PERK1 | 310 | 407 | - | - | |
Cre11g0934 | 694 | Gene3D | Phosphorylase Kinase; domain 1 | 309 | 407 | - | - | |
Cre11g0934 | 694 | SUPERFAMILY | Protein kinase-like (PK-like) | 307 | 604 | IPR011009 | - | |
Cre11g0934 | 694 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 167 | 648 | IPR047117 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g1669 | Cre-Chr6:13440115 | Cre11g0934 | Cre-Chr11:6612529 | 2.40E-158 | dispersed | |
Cre11g0731 | Cre-Chr11:4424489 | Cre11g0934 | Cre-Chr11:6612529 | 1.40E-161 | dispersed | |
Cre11g0934 | Cre-Chr11:6612529 | Cre11g1014 | Cre-Chr11:7454804 | 4.70E-123 | dispersed | |
Cre11g0930 | Cre-Chr11:6569863 | Cre11g0934 | Cre-Chr11:6612529 | 2.30E-37 | proximal | |
Cre05g2726 | Cre-Chr5:38124533 | Cre11g0934 | Cre-Chr11:6612529 | 7.10E-54 | transposed | |
Cre07g1280 | Cre-Chr7:26841955 | Cre11g0934 | Cre-Chr11:6612529 | 9.30E-171 | transposed | |
Cre08g1089 | Cre-Chr8:23989463 | Cre11g0934 | Cre-Chr11:6612529 | 2.30E-50 | transposed | |
Cre11g0934 | Cre-Chr11:6612529 | Cre05g2105 | Cre-Chr5:32934522 | 2.40E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64536 | PF07714 | PK_Tyr_Ser-Thr | 2.60E-46 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0934 | - | - | - | 0.0 |