Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0945 | ATGGCTAAGAAGGACGATTCTGCAAGGCCTCCACTTCAGCGCCCCACCATTACTCTGCCGCCGCGCCCTTCTATGGAGGCTTTTTTCGCTGGCGGACCCACTGGAGTTAGCCCTGGCCCGATGACTCTTCTCTCCAGTTACTTCGCCGACGGTGCCGTTGACTCGCCCTCCTTCTCCCAGCTTCTCGCCGGAGCTATGGCCTCTCCGATGGCTATGGGGTTTTTCGGAACTGGGTCCACACCCAATTATTACGCCAAGGATGGAACCGCCTCGGAATTGGAATTTGGGATGAAACAATCGAAGCCGCTGAATTTAGTGGTAGCTCGGCCTCCTTTGTTCTCGGTCCCGCCGGGGCTTAGTCCTTCTGGGTTGCTTAATTCGCCTGGGTTTTATCCTCCTCAGAGTCCATTCGGAATGTCGCACCAGCAAGCATTGGCTCAGGTTACTGCTCAAGCGGCATTGGCAAATTCTCATATGCATATGCAGCAAGCTGAATATCAACATTCTTCGGTACCAGCTCCTACAGAACCGTTGACACGGGATCCATCATTTTCTCTTGATGAAGCATCTCAACTGGCCATATTACCCTCCACTTCAGACACAAAAAGTCTGATTGCAGAACCGACAGAAGTCTCTCACCCTGACAGAAAATATCAACCTCCTCCTCCTCACGTCTCTGATAAACCTGCAGATGATGGCTATAATTGGCGTAAATATGGACAGAAGTTGGTTAAGGGCAGTGAATATCCCCGAAGCTATTACAAATGCACTCATTTGAATTGCCCTGTAAAAAAGAAGATTGAGCGCTCACCTGATGGTCAGATTACTGAAATTATTTACAAAGGACAGCACAACCACGAACCTCCTCCAGCCAACAAACGTGCAAGAGATAATAGTGAACCGAGTGGATGTACAAATTCTTTGATGAAGCCTGAATGTGGTTTGCAAAATCAAGCTGGAATTTTGAACAAGTCAAGTGAAAATGTGCAATTAGGGTCTAGCGACAGTGAAGAACGAGCTGATACAGAGATAACAGATGACAGAGATGAAGATGAGCCAAATCCAAAGAGGCAGAACATTGACGCAGGGACATCTGGTGTTGCCTTGTCACATAAAACACTCACAGAACCAAAAATCATTGTTCAAACAAGAAGTGAGGTTGACCTGTTAGATGACGGTTATAGGTGGCGCAAGTACGGGCAGAAAGTGGTTAAAGGAAATCCTAACCCTAGGAGCTACTACAAATGCACTAGTGCTGGGTGCAACGTCCGAAAGCATGTTGAGAGATCTTCAACAGACTCGAAAGCTGTTGTTACTACATACGAAGGGAAACATAACCATGATGTTCCTGCAGCTAGAAACAGCAGCCACCACACGGTCAACAATACTGTCCCCCAGATCAAACCACACAAAGTTGTAGCTCAGAAACATCCATTACTTAAAGAGATGGAATATGGAACTAATGACCAGAGACCTGCCGTTTTGCGGCTTAAAGAAGAGCAAATCACCGTGTAA | 1515 | 47.13 | MAKKDDSARPPLQRPTITLPPRPSMEAFFAGGPTGVSPGPMTLLSSYFADGAVDSPSFSQLLAGAMASPMAMGFFGTGSTPNYYAKDGTASELEFGMKQSKPLNLVVARPPLFSVPPGLSPSGLLNSPGFYPPQSPFGMSHQQALAQVTAQAALANSHMHMQQAEYQHSSVPAPTEPLTRDPSFSLDEASQLAILPSTSDTKSLIAEPTEVSHPDRKYQPPPPHVSDKPADDGYNWRKYGQKLVKGSEYPRSYYKCTHLNCPVKKKIERSPDGQITEIIYKGQHNHEPPPANKRARDNSEPSGCTNSLMKPECGLQNQAGILNKSSENVQLGSSDSEERADTEITDDRDEDEPNPKRQNIDAGTSGVALSHKTLTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERSSTDSKAVVTTYEGKHNHDVPAARNSSHHTVNNTVPQIKPHKVVAQKHPLLKEMEYGTNDQRPAVLRLKEEQITV | 504 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6767412 | 6772000 | - | CrPI670011_11g009450.1 | Cre11g0945 | 512690 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0945 | 504 | SMART | WRKY_cls | 230 | 288 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre11g0945 | 504 | SMART | WRKY_cls | 390 | 449 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre11g0945 | 504 | SUPERFAMILY | WRKY DNA-binding domain | 382 | 450 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre11g0945 | 504 | MobiDBLite | consensus disorder prediction | 195 | 234 | - | - | |
Cre11g0945 | 504 | MobiDBLite | consensus disorder prediction | 326 | 369 | - | - | |
Cre11g0945 | 504 | ProSiteProfiles | WRKY domain profile. | 225 | 289 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre11g0945 | 504 | FunFam | WRKY transcription factor 33 | 377 | 443 | - | - | |
Cre11g0945 | 504 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cre11g0945 | 504 | ProSiteProfiles | WRKY domain profile. | 385 | 450 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre11g0945 | 504 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 163 | 461 | IPR044810 | GO:0003700(InterPro) | |
Cre11g0945 | 504 | FunFam | WRKY transcription factor | 221 | 290 | - | - | |
Cre11g0945 | 504 | Gene3D | WRKY domain | 375 | 451 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre11g0945 | 504 | Gene3D | WRKY domain | 223 | 290 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre11g0945 | 504 | MobiDBLite | consensus disorder prediction | 281 | 311 | - | - | |
Cre11g0945 | 504 | SUPERFAMILY | WRKY DNA-binding domain | 227 | 289 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre11g0945 | 504 | Pfam | WRKY DNA -binding domain | 231 | 287 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre11g0945 | 504 | Pfam | WRKY DNA -binding domain | 391 | 448 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2227 | Cre-Chr2:35905384 | Cre11g0945 | Cre-Chr11:6767412 | 3.30E-60 | dispersed | |
Cre06g2110 | Cre-Chr6:28904915 | Cre11g0945 | Cre-Chr11:6767412 | 9.10E-39 | dispersed | |
Cre09g0476 | Cre-Chr9:4541985 | Cre11g0945 | Cre-Chr11:6767412 | 1.90E-22 | dispersed | |
Cre10g0629 | Cre-Chr10:5852646 | Cre11g0945 | Cre-Chr11:6767412 | 1.30E-68 | dispersed | |
Cre10g0687 | Cre-Chr10:6515505 | Cre11g0945 | Cre-Chr11:6767412 | 5.30E-72 | dispersed | |
Cre10g1316 | Cre-Chr10:26507672 | Cre11g0945 | Cre-Chr11:6767412 | 6.40E-24 | dispersed | |
Cre10g2352 | Cre-Chr10:37666503 | Cre11g0945 | Cre-Chr11:6767412 | 3.60E-66 | dispersed | |
Cre11g0945 | Cre-Chr11:6767412 | Cre11g1198 | Cre-Chr11:9855583 | 3.30E-17 | dispersed | |
Cre11g0945 | Cre-Chr11:6767412 | Cre05g2563 | Cre-Chr5:36872689 | 3.00E-119 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54665 | PF03106 | WRKY | 3.20E-25 | CL0274 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0945 | - | - | - | 0.0 |