Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0950 ATGGTGCTTTCCCCTACTTTCTCCCCATGCCTTCTCTCCTCTCACCTTCTTCCATGTCTGTGGAGCGAGCTTTGCCTGAGGCCAACACCACCTCCACTCAATGCCACCGATGAAACCCCCGTCGAATGCTACGCCTGCACTCAAGTCGGCGTTCCAGCCTTCCACTCCACCAGCTGCGACCACGCTCACCAGCAACCCGAATGGGAAGCCTCCGCGGGTTCTTCCCTCGTTCCCATTCAACCCACCAAACCCTCCCCATCTCGCCGCCCCGCACTGCCACATCCTTCCGGTTGCTTCGGCACCGTTCTCGACCCGAGAACCAAGCCGGTTCAAAGATGGAACCGGGTTCTGTTATTGGCCCGTGGAATGGCTCTCGCTGTTGATCCTCTTTACTTCTACGCTCTGTCTATCGGAAGAGGAGGCTCCCCCTGCCTCTACATGGACGGTGGATTGGCTGCCGTCGTCACCGTCCTCCGCACGTGCCTCGATTTCGTTCACTTGTGGCACGTTTGGCTTCAATTCCGCCTCGCTTACGTGTCCAAAGAGAGTATGGTGATTGGCTGTGGGAAACTCGTCTGGGACGCACGTGCTATCGCCTCTCATTACGTTCGTTCCTTCAAAGGCTTCTGGTTTGATGCCTTTGTCATCCTCCCTGTTCCTCAGATTGTTTATTGGTTTGTTTTACCAAAACTGATCAGAGAAGAGAGAATAAAACTTATAATGACAGTTGTCTTATTGATGTTCTTGTTCCAATTCCTCCCAAAAGTTTACCACTCCATTATTTTAATGAGAAGAATGCAGAAGGTCACCGGATACATCTTCGGCACCATTTGGTGGGGTTTTGGCCTCAATCTCATTGCCTATTTCATTGCTTCTCATGTTGCTGGGGGTTGCTGGTATGTTCTTGCAATACAACGAGTTGCTTCTTGCATCCAGCAACATTGTGAGAGAAACAAGTGCAATCTATCTCTGTCTTGCTCTGAGGAGGTGTGTTATCAGTTTCTCTCATCAGCGACAACAATTGAAAGTTCGTGTGGTCGTAATTCGACTGCTACATTTAGGAAGCCACTATGCTTGGATGTTAAAGGTCCATTCGCCTATGGCATCTACAAGTGGGCTCTTCCAGTCATTTCCAGCAATTCAGTAGCGGTCAAAATCCTTTATCCCATCTTTTGGGGATTAATGACTCTCAGCACCTTTGGCAATGACCTCGAGCCTACCAGTAATTGGCTGGAAGTATGCTTCAGTATTTGCACGGTGCTAAGTGGACTGCTGCTTTTCACTCTTTTGATTGGTAATATCCAGGTTCTTTTGCACGCTGTCATGGCAAGGAGGCGGAAAATGCAGCTGAGATGTCGAGATTTGGAGTGGTGGATGAGGAGACGACAATTGCCATCTCGTTTGAGGCAACGAGTTCGACACTACGAACACCAAAGATGGGCAGCCATGGGCGGAGAAGATGAGATGGAACTAATCAATGATTTGCCCGAAGGTCTTCGAAGAGACATTAAACGTCATCTTTGTGTTGATCTAATCAGAAAGGTGCCTCTCTTCCAAAACCTGGAGGAGCTGATTCTAGACAACATATGTGATCGAGTCAAGCCACTTGTATTCTCCAAAGATGAAAAGATTATCAGAGAAGGGGATCCTGTTCCAAGGATGTTGTTCATAGTGTGTGGACGAGTAAAACGTAGCCAAAGCCTAAGCAAGGGTATGACAGCAACAAGTTGGATCGAACCAGGAGGATTTCTTGGCGATGAGCTGCTATCGTGGTGTCTTCGGCGCCCATTTCTAGAGAGACTTCCAGCTTCATCCGCTACATTTGTTTGCATTGAACCAACAGAAGCATTTGCCCTGAAAGCAGACCATCTGAAGTACATAACCGATCACTTCCGCTACAAATTCGCGAACGAGAGACTGAAGAGAACTGCAAGATATTACTCCTCCAACTGGAGAACATGGGCTGCTGTGAACATACAATTCGCTTGGCGTCGATACCGAAAGAGGATGAGACGTCCAGTGATAGCCGTGGTGGAAAATGGAAGCAATGAACGTAGGCTTTTGCAGTATGCTGCAATGTTCATGTCATTCAGGCCACATGACCATCTTGAATAG 2115 48.46 MVLSPTFSPCLLSSHLLPCLWSELCLRPTPPPLNATDETPVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQPTKPSPSRRPALPHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVSKESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLIMTVVLLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYQFLSSATTIESSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIGNIQVLLHAVMARRRKMQLRCRDLEWWMRRRQLPSRLRQRVRHYEHQRWAAMGGEDEMELINDLPEGLRRDIKRHLCVDLIRKVPLFQNLEELILDNICDRVKPLVFSKDEKIIREGDPVPRMLFIVCGRVKRSQSLSKGMTATSWIEPGGFLGDELLSWCLRRPFLERLPASSATFVCIEPTEAFALKADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRKRMRRPVIAVVENGSNERRLLQYAAMFMSFRPHDHLE 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6809920 6814399 - CrPI670011_11g009500.1 Cre11g0950 512695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0950 704 MobiDBLite consensus disorder prediction 70 94 - -
Cre11g0950 704 ProSiteProfiles cAMP/cGMP binding motif profile. 517 596 IPR000595 -
Cre11g0950 704 Gene3D - 147 441 - -
Cre11g0950 704 SUPERFAMILY cAMP-binding domain-like 444 631 IPR018490 -
Cre11g0950 704 Gene3D Jelly Rolls 515 633 IPR014710 -
Cre11g0950 704 Pfam Cyclic nucleotide-binding domain 537 626 IPR000595 -
Cre11g0950 704 SUPERFAMILY Voltage-gated potassium channels 105 439 - -
Cre11g0950 704 Gene3D Helix hairpin bin 443 508 - -
Cre11g0950 704 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 100 671 - -
Cre11g0950 704 CDD CAP_ED 517 624 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g2040 Cre-Chr7:36021952 Cre11g0950 Cre-Chr11:6809920 2.40E-214 dispersed
Cre10g0839 Cre-Chr10:9147254 Cre11g0950 Cre-Chr11:6809920 2.00E-184 dispersed
Cre11g0950 Cre-Chr11:6809920 Cre10g1605 Cre-Chr10:30159402 7.20E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0950 K05391 - csv:101203560 1324.69