Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0975 ATGGATTTGTTTTTAATTGCCTTGTTGTTATGCTTCGATTCACCTCGTCGGAACGCCTCCCATCGTTCTCGGCGATTGCAATTGGATTCCCGACTTCTTGGAGTCATCAATGCGTTCTTGATTTGCTTTGCCCACCTTGTTTGTTCGATTCATTTAAGGGAGGCCATGAATGCGAATAGTCCGCGATTTCAATCGTTTGGTCAAACTGAGATTAATTGGGACAAGCTTGATAAAGCGAAATTTTATGGCGTAGGAGCCGGTCTCTTTACGGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACGAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCCCTGTCTGTTATTAAGGGCTTACTGAAGAATGACGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATAACTGGTGCAATTCCTGCCAGGATTATCTTTCTTACTGCTTTGGAGACAACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTATGGCAAATGGGTTAGCTGGCATGACTGCCTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAGGAAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCCAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGATTCTTAGGTCAAAACTCTGCTTCTGAGAAATTTGCTCCCAGCCATACCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCTTTGGACACCATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTGATCGCTGAGGATGGATGGAAAGGTTTATATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA 1131 44.12 MDLFLIALLLCFDSPRRNASHRSRRLQLDSRLLGVINAFLICFAHLVCSIHLREAMNANSPRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAAMANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNSASEKFAPSHTQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6996549 7004338 - CrPI670011_11g009750.1 Cre11g0975 512720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0975 376 Gene3D Mitochondrial carrier domain 82 376 IPR023395 -
Cre11g0975 376 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 67 375 - -
Cre11g0975 376 PRINTS Mitochondrial carrier protein signature 294 316 IPR002067 GO:0055085(InterPro)
Cre11g0975 376 PRINTS Mitochondrial carrier protein signature 238 256 IPR002067 GO:0055085(InterPro)
Cre11g0975 376 PRINTS Mitochondrial carrier protein signature 94 108 IPR002067 GO:0055085(InterPro)
Cre11g0975 376 SUPERFAMILY Mitochondrial carrier 74 366 IPR023395 -
Cre11g0975 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 162 IPR018108 -
Cre11g0975 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 285 369 IPR018108 -
Cre11g0975 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 177 265 IPR018108 -
Cre11g0975 376 FunFam Mitochondrial substrate carrier family protein 82 373 - -
Cre11g0975 376 Pfam Mitochondrial carrier protein 86 160 IPR018108 -
Cre11g0975 376 Pfam Mitochondrial carrier protein 179 266 IPR018108 -
Cre11g0975 376 Pfam Mitochondrial carrier protein 290 372 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1982 Cre-Chr5:31905459 Cre11g0975 Cre-Chr11:6996549 1.40E-62 dispersed
Cre09g0161 Cre-Chr9:1829978 Cre11g0975 Cre-Chr11:6996549 7.00E-12 dispersed
Cre10g0424 Cre-Chr10:3103829 Cre11g0975 Cre-Chr11:6996549 2.30E-10 dispersed
Cre11g0975 Cre-Chr11:6996549 Cre09g0075 Cre-Chr9:1038528 2.30E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0975 K15121 - csv:101206140 613.609