Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0975 | ATGGATTTGTTTTTAATTGCCTTGTTGTTATGCTTCGATTCACCTCGTCGGAACGCCTCCCATCGTTCTCGGCGATTGCAATTGGATTCCCGACTTCTTGGAGTCATCAATGCGTTCTTGATTTGCTTTGCCCACCTTGTTTGTTCGATTCATTTAAGGGAGGCCATGAATGCGAATAGTCCGCGATTTCAATCGTTTGGTCAAACTGAGATTAATTGGGACAAGCTTGATAAAGCGAAATTTTATGGCGTAGGAGCCGGTCTCTTTACGGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACGAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCCCTGTCTGTTATTAAGGGCTTACTGAAGAATGACGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATAACTGGTGCAATTCCTGCCAGGATTATCTTTCTTACTGCTTTGGAGACAACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTATGGCAAATGGGTTAGCTGGCATGACTGCCTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAGGAAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCCAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGATTCTTAGGTCAAAACTCTGCTTCTGAGAAATTTGCTCCCAGCCATACCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCTTTGGACACCATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTGATCGCTGAGGATGGATGGAAAGGTTTATATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA | 1131 | 44.12 | MDLFLIALLLCFDSPRRNASHRSRRLQLDSRLLGVINAFLICFAHLVCSIHLREAMNANSPRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAAMANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNSASEKFAPSHTQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6996549 | 7004338 | - | CrPI670011_11g009750.1 | Cre11g0975 | 512720 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0975 | 376 | Gene3D | Mitochondrial carrier domain | 82 | 376 | IPR023395 | - | |
Cre11g0975 | 376 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 67 | 375 | - | - | |
Cre11g0975 | 376 | PRINTS | Mitochondrial carrier protein signature | 294 | 316 | IPR002067 | GO:0055085(InterPro) | |
Cre11g0975 | 376 | PRINTS | Mitochondrial carrier protein signature | 238 | 256 | IPR002067 | GO:0055085(InterPro) | |
Cre11g0975 | 376 | PRINTS | Mitochondrial carrier protein signature | 94 | 108 | IPR002067 | GO:0055085(InterPro) | |
Cre11g0975 | 376 | SUPERFAMILY | Mitochondrial carrier | 74 | 366 | IPR023395 | - | |
Cre11g0975 | 376 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 74 | 162 | IPR018108 | - | |
Cre11g0975 | 376 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 285 | 369 | IPR018108 | - | |
Cre11g0975 | 376 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 177 | 265 | IPR018108 | - | |
Cre11g0975 | 376 | FunFam | Mitochondrial substrate carrier family protein | 82 | 373 | - | - | |
Cre11g0975 | 376 | Pfam | Mitochondrial carrier protein | 86 | 160 | IPR018108 | - | |
Cre11g0975 | 376 | Pfam | Mitochondrial carrier protein | 179 | 266 | IPR018108 | - | |
Cre11g0975 | 376 | Pfam | Mitochondrial carrier protein | 290 | 372 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g1982 | Cre-Chr5:31905459 | Cre11g0975 | Cre-Chr11:6996549 | 1.40E-62 | dispersed | |
Cre09g0161 | Cre-Chr9:1829978 | Cre11g0975 | Cre-Chr11:6996549 | 7.00E-12 | dispersed | |
Cre10g0424 | Cre-Chr10:3103829 | Cre11g0975 | Cre-Chr11:6996549 | 2.30E-10 | dispersed | |
Cre11g0975 | Cre-Chr11:6996549 | Cre09g0075 | Cre-Chr9:1038528 | 2.30E-71 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0975 | K15121 | - | csv:101206140 | 613.609 |