Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g0978 ATGGCGTTGGCCATGGTGATTCTTGCTCTGTTTCTACTCCTCTGTTTTTGCTCTGCTTTGCTACGATGGAATGAAGTTCGATATAGCAAAAAAGGGTTGCCTCCAGGTACAATGGGATGGCCTGTTTTTGGGGAAACTACTGAGTTTCTTAAACAAGGTCCAAACTTTATGAAATCTCAAAGAGCGAGGTATGGGAGCATTTTCAAGTCCCATATTTTGGGGTGTCCTACGATTGTTTCTATGGATCCTGAGGTTAATAGATATGTTTTAATGAATGAATCAAAAGGGCTTGTCCCTGGTTACCCTCAATCCATGCTTGACATACTTGGAAAATGCAATATCGCCGCCGTCCATGGCGGCGCTCACAAGCTCATGAGAGGTGCTCTGCTTGCTATTGTTAGCCCCACCATGATTAAAGACCGTCTCCTTCCTAAAATCGATGACTTTATGCGATCTCATTTGAGGAATTGGGATCCCCAAATCATTGATATCCAAGAAAAGACTAAAGAGATGGCTCTCCGGTCGTCTTTGAAGCAGATTGCTGGAATCGAAACCGGTCCGTTGTCAGAATCTTTCATCCCGGAGTTCTTCAAGCTCGTCCTCGGCACCCTCTCGCTCCCCATCGATCTTCCCGGCACGAACTACCGCCGAGGAATTCAGGCGAGGAAGAACATAATAAAGCTATTGCAGCAGCTGATAAATGAGAGAAGAGATTCAAAGATACAAAAGGATGACATGCTTGGGTATTTTATGAGTGAGGAGAACAAATATAAGCTAAACGATGAAGAGATTATTGATCAAATCATCACTCTATTGTACTCTGGCTATGAAACTGTTTCAACAACTTCTATGATGGCTGTAAAGTTTCTCCATGATCATCCCAAAGTTCTTCAGCAACTCAGAGAAGAGCATTTGGCAATCAGAGAGAAGAAAAATCCTGACGACCCCATTGATTGGGATGATCTTAAAGCAATGAAGTTCACTCGTGCGGTGATAAATGAAACATCAAGGCTGGCCACTATTGTTAATGGGGTTTTGAGGAAAACTACAAAGGACATGGAACTAAATGGCTTTCTCATTCCAAAAGGATGGAGGATTTATGTGTATACTAGAGAGATAAACTATGACCCTTTTCTCTATTCTGAACCATTCACCTTCAACCCTTGGAGATGGCTGGACAAAAACTTAGAGTCCCATAATTACTTCTTCATCTTTGGAGGTGGAACTAGACATTGTCCTGGCAAAGAATTGGGAATTGCAGAGATTTCTACTTTTTTACATTACTTTGTAACTAAATACAGATGGGAAGAAGTTGGAGGAGATAAGCTCTTGAAATTTCCAAGAGTGGAGGCTCCAAGTGGGTTCCACATTAGGGTTTCATCTTACTGA 1389 42.12 MALAMVILALFLLLCFCSALLRWNEVRYSKKGLPPGTMGWPVFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVSMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGGAHKLMRGALLAIVSPTMIKDRLLPKIDDFMRSHLRNWDPQIIDIQEKTKEMALRSSLKQIAGIETGPLSESFIPEFFKLVLGTLSLPIDLPGTNYRRGIQARKNIIKLLQQLINERRDSKIQKDDMLGYFMSEENKYKLNDEEIIDQIITLLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKNPDDPIDWDDLKAMKFTRAVINETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDPFLYSEPFTFNPWRWLDKNLESHNYFFIFGGGTRHCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY 462
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 7060392 7062927 + CrPI670011_11g009780.1 Cre11g0978 512723
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre11g0978 462 PANTHER CYTOCHROME P450 26 33 433 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cre11g0978 462 SUPERFAMILY Cytochrome P450 27 442 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 Gene3D Cytochrome P450 24 459 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g0978 462 CDD CYP90-like 60 460 - -
Cre11g0978 462 FunFam Cytochrome P450 85A1 24 461 - -
Cre11g0978 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre11g0978 462 Pfam Cytochrome P450 34 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1726 Cre-Chr7:32709784 Cre11g0978 Cre-Chr11:7060392 6.00E-74 dispersed
Cre10g0437 Cre-Chr10:3275604 Cre11g0978 Cre-Chr11:7060392 3.00E-53 dispersed
Cre10g0438 Cre-Chr10:3295159 Cre11g0978 Cre-Chr11:7060392 9.40E-61 dispersed
Cre10g0597 Cre-Chr10:5467411 Cre11g0978 Cre-Chr11:7060392 3.10E-75 dispersed
Cre11g0978 Cre-Chr11:7060392 Cre09g0053 Cre-Chr9:821641 7.60E-85 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g0978 K09590 - csv:101206858 876.315