Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g0996 | ATGGGAATGAAGAGAACTGAGGCTACTGTTTCCTGTCTTGTGGCTTCTTTATTGTTTTGGGCTTCTGCAATAAATGGCTTGTTATCTCCCAAAGGTGTTAACTATGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTTCAAGATCCCCATGGTGTGCTTGAGAATTGGGATGGGGATTCTGTTGACCCATGTAGTTGGACTATGGTTACTTGCTCTCCTGAGAGCCTTGTCATTGGCTTAGGGACTCCAAGCCAGAACCTGTCTGGGACTCTTTCTCCAACCATTGGGAATTTGACAAACCTTCAAATTGTGCTGTTGCAGAACAACAATATAACAGGCCCAATTCCCCCAGAGCTTGGGAGGCTCTCAAAGCTCCAAACACTTGACCTATCAAACAATTTCTTCACAGGGGAAATTCCTTCTCCTTTAGGCCATTTGAGAAGCCTACAGTACTTGAGGCTTAACAACAACAGTCTTTCTGGGGTAATTCCAATGTCTTTAGCTAACATGACACAACTTGCCTTTCTTGATGTGTCTTATAATAACATCAGTGGCCCTCTGCCTAGATTTCCCAGCAAAACATTCAACATTGTTGGGAACCCTCTGATTTGTGCAACTGGGTCCGAGGCCGGTTGCCACGGTACAACTCTAATGCCCATGTCCATGAATTTGAACAGTACACAAACTGGTTTACCTGCTGTGAAATTGAAGAGTCATAAAATGGCCCTTACATTTGGCTTGAGCCTAGCTTGCCTATGTCTGATTGTTCTTGTATTTGGACTGTTCATATGGTGGAGAAAACGAAGCAATCGACCTACATTCTTCGATGTAAAAGACCAACAACATGAGGAAATTTCGCTTGGAAATCTGAGAAGGTTCCAATTTAGAGAACTTCAGATAGCAACAAACAATTTCAGCAGCAAGAACATACTAGGAAAGGGAGGTTTTGGAAATGTTTACAAAGGAATTCTTTCAGATGGAACGGTTGTTGCTGTTAAAAGGCTCAAAGATGGCAATGCAAGCAGAGGCGAAATCCAGTTTCAGACTGAAGTTGAGATGATCAGTCTAGCCGTGCACCGTCATCTCCTCAGATTATACGGATTTTGCAACACACCAACTGAAAGGCTTCTTGTTTACCCATATATGTCGAATGGAAGTGTTGCATCACGTCTCAAAGGAAAACCGGTATTAGACTGGGGAACAAGGAAGAGGATTGCTATAGGAGCTGCAAGGGGATTGTTATACCTACATGAACAGTGTGACCCAAAGATAATACATAGAGATGTTAAGGCTGCAAACATATTGCTTGATGACTACTGCGAGGCTGTCGTCGGAGATTTCGGGTTAGCAAAGCTTCTGGATCATCAAGATTCACATGTCACAACTGCTGTGAGAGGCACCGTGGGACATATAGCTCCTGAGTATCTATCCACCGGACAGTCCTCCGAGAAAACGGATGTTTTCGGCTTTGGAATCCTACTCCTTGAACTGATCACAGGGCAGAGAGCCCTTGAGTTTGGCAAAGCAGCTAATCAGAAAGGAGGCATTCTTGACTGGGTGAAGAAGATTCACCTAGAGAAGAAGCTGGAAATGTTAGTGGACAAGGATCTGAAAGCCAACTATGACAGAGTTGAACTAGAGGAGATGGTTCAAGTGGCTTTATTGTGCACACAATACCTACCAGGACATAGACCAAAGATGTCAGAAGTTGTCAGAATGCTTGAAGGAGAAGGGCTTGCTGTGAGATGGGAAGCTTCTCAGAGAGTTGACTCAACAAAGTGCAAACCCCATGATTTCTCTTCCTCAGACAGATACTCTGATCTCACAGATGATTCATCATTGTTGGTTCAAGCCATGGAGCTCTCTGGTCCAAGATCCTCACCAGTGACCACACTTTCGAGCGGAGGATGA | 1914 | 44.04 | MGMKRTEATVSCLVASLLFWASAINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDSVDPCSWTMVTCSPESLVIGLGTPSQNLSGTLSPTIGNLTNLQIVLLQNNNITGPIPPELGRLSKLQTLDLSNNFFTGEIPSPLGHLRSLQYLRLNNNSLSGVIPMSLANMTQLAFLDVSYNNISGPLPRFPSKTFNIVGNPLICATGSEAGCHGTTLMPMSMNLNSTQTGLPAVKLKSHKMALTFGLSLACLCLIVLVFGLFIWWRKRSNRPTFFDVKDQQHEEISLGNLRRFQFRELQIATNNFSSKNILGKGGFGNVYKGILSDGTVVAVKRLKDGNASRGEIQFQTEVEMISLAVHRHLLRLYGFCNTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGGILDWVKKIHLEKKLEMLVDKDLKANYDRVELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGEGLAVRWEASQRVDSTKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPRSSPVTTLSSGG | 637 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7251364 | 7256558 | - | CrPI670011_11g009960.1 | Cre11g0996 | 512741 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g0996 | 637 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 13 | 626 | - | - | |
Cre11g0996 | 637 | Pfam | Leucine rich repeat N-terminal domain | 34 | 73 | IPR013210 | - | |
Cre11g0996 | 637 | Gene3D | Transferase(Phosphotransferase) domain 1 | 383 | 595 | - | - | |
Cre11g0996 | 637 | Gene3D | Phosphorylase Kinase; domain 1 | 275 | 382 | - | - | |
Cre11g0996 | 637 | Gene3D | Ribonuclease Inhibitor | 33 | 215 | IPR032675 | - | |
Cre11g0996 | 637 | Pfam | Leucine rich repeat | 125 | 184 | IPR001611 | GO:0005515(InterPro) | |
Cre11g0996 | 637 | ProSiteProfiles | Protein kinase domain profile. | 306 | 561 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g0996 | 637 | SUPERFAMILY | Protein kinase-like (PK-like) | 282 | 576 | IPR011009 | - | |
Cre11g0996 | 637 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 383 | 595 | - | - | |
Cre11g0996 | 637 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 425 | 437 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g0996 | 637 | SUPERFAMILY | L domain-like | 35 | 305 | - | - | |
Cre11g0996 | 637 | Pfam | Leucine Rich Repeat | 101 | 123 | IPR001611 | GO:0005515(InterPro) | |
Cre11g0996 | 637 | ProSitePatterns | Protein kinases ATP-binding region signature. | 312 | 334 | IPR017441 | GO:0005524(InterPro) | |
Cre11g0996 | 637 | Pfam | Protein tyrosine and serine/threonine kinase | 309 | 575 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g0996 | 637 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 33 | 215 | - | - | |
Cre11g0996 | 637 | FunFam | Somatic embryogenesis receptor kinase 1 | 275 | 382 | - | - | |
Cre11g0996 | 637 | SMART | serkin_6 | 306 | 575 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g2140 | Cre-Chr6:29185208 | Cre11g0996 | Cre-Chr11:7251364 | 3.10E-185 | dispersed | |
Cre08g1725 | Cre-Chr8:29510445 | Cre11g0996 | Cre-Chr11:7251364 | 7.10E-195 | dispersed | |
Cre09g1792 | Cre-Chr9:36378118 | Cre11g0996 | Cre-Chr11:7251364 | 9.20E-219 | dispersed | |
Cre10g1082 | Cre-Chr10:21439598 | Cre11g0996 | Cre-Chr11:7251364 | 3.20E-131 | dispersed | |
Cre11g0996 | Cre-Chr11:7251364 | Cre11g1014 | Cre-Chr11:7454804 | 1.20E-72 | dispersed | |
Cre11g0996 | Cre-Chr11:7251364 | Cre04g1994 | Cre-Chr4:37315942 | 5.20E-153 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64540 | PF00069 | Pkinase | 6.00E-44 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g0996 | - | - | - | 0.0 |