Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1014 ATGTGCGAGCTGAAGATTGGCTCCAGCAAGTCGCCCCCACGTTTTGTAAAACCGCCCCCACTATTATCCGCCGAAGGATATTTCTGGGGTTACCGAGTGGACTTGAGAGATTCCATTTTCGACCTTCAGGACTTGCATTGGGTTTGTTCTAGTTCTGCTGAAATTGCTCTGCACTTTGTTGATCTGGTAGATTTGAGGTTCTTTTGTTTTCATGGTTTGAGTTCTGGGTCTGTGAATTGGATTATGGCTTCACCTTCTCCAAGTATTTCTCCTCCTGAGAATCCATCAGATTCCTCAGTTTCTTCACCTCCTTCTCCTTCTTCTCCGGTGGAGTCTGCAACCTCTCCCTCGTCTCCCACATCTTCTGAGCCTAATCAGACTGGTGAACCTCCTTCATCACTTTCTAGTTCTTCAGCTCCACCTCCTCAGTCACCACCAGCTGTTCCTGATGCTCCTCCTCCTTCTCCTCCATTGTCTCCTCCTCCATTGACAGCATCACCACCTGCAACACCAGCATCCCCACCTCCTTCTCCCCCTGCTGGTTCACCACCTTCACCTCCCCAATCTTCGCCCTCGCCGCCATCGCCTCCGCCACCTTCAACACCGTCCTCCCCACCACCACCACCACCACCTTCAACATCAACCTCTCCACCACCACCTTCAACAACATCACCACCACCTTCCTCTGCATCACCACCTCCCCCAGAGAGATCAACTACCTCTCCTCCTCCTCAAACTTCACCTCCCCCTCCTGATTTATCACCTCCGCCGCCACCAGCAGCAGCAGATGGTTCTCCACCTCCTGCATCCAATCCTAGACCTCCATCTTCAACGCCCTCTCCCCCTCCCCCTGATACAATTTCACCTTCTCCACCTCCACCAACTAATGTCCCAACACCACCTTCATCAACAGGAGAATCACCTAAAGTATCTCCCCCATCCCACAAGGCTTCTCCTCCTCCTTCTGATTCTCAATCTCCACCTTCAGATAACTCCCCTCCACCAAGATCCACAGTACCATCACCTCCTTCTTCGGTTCCTTCATCGTCTGCTCCTCCTCCAGTTAGTGACCCTGGTTCTCCAACTAATTCATCTGGTGGAACTCCTGTTACCCCTCCAACTTCTGTTACACCAGAACGACCAATTGCAACAATCAATGGTACCAATGTTACAGCAAATAACTCAACCACTAGCAAGGGGGGTTTCAGCACTGGAGCATCTGTGGCAGTTGGCAGTGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCTCTGTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAGAATATCCCTTACACCATGGCTTCTCCTTTTTCCTCGCAAAACTCAGATTCCCTTTTCCTAAGGCCCCATTCTTCAGCTCCTGTAGTAGGAAGTCGTACTGATAGTGATTTCAAGTATTCATCATCGGAAGGAGGTGGAGTAGGTAATTCCAGATCGTTTGCTTATGATGACCTACACCAGGCAACAAGTGGGTTTTCATCGAATAATCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTATAAAGGCACCCTTGCAGATGGAAGAGACGTGGCTGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCCGAAGTTGAGATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTTGGTTACTGTATCTCTGATTATCAAAGATTGCTTGTCTACGATTATGTTCCAAACAATACCCTTCATTACCATCTACACGGGGAGAACAGGCCAGTTTTGGCTTGGGCTACACGTGTTCGGATTGCTGCTGGTGCAGCTCGTGGAATTGCTTACCTACATGAAGATTGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTTGAAGCTCAGGTCGCAGATTTTGGGCTTGCTAAATTGGCACTGGATTCACATACTCATGTAACAACTCGTGTTATGGGAACCTTTGGATACATGGCCCCAGAGTACGCAACGAGTGGGAAATTGACAGATAAATCTGATGTTTTCTCTTTCGGGGTTGTACTTTTGGAGTTAATTACTGGTCGCAAGCCTGTGGATTCTTCTCAGCCTCTAGGGGATGAGAGCTTAGTTGAATGGGCTCGACCCTTGCTTGCACAAGCCATTGAGGATGAGAATTTTGAAGAACTGGTGGATCCAAGGCTAGACAACAATTATGTAGACAGAGAAATGTTCCGGATGATCGAAGCAGCCGCTGCTTGTGTTCGTCATTCGGCAGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTGCAAATGGGGTGAAACCTGGGCAGAGTGGAGTGTTTGATTCAGCTGAACAATCTGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTATAGTTACGGTTATTCCGACCGAGATCGCAGTCGAAGTTATAGTCAAAGTCATAGTAGCTGGAGTAGAGAATCCAGAGATCAAAGTCCCTCGGCGCCTATGAATCGATCCCGGCAATGGAACATCTGA 2580 48.06 MCELKIGSSKSPPRFVKPPPLLSAEGYFWGYRVDLRDSIFDLQDLHWVCSSSAEIALHFVDLVDLRFFCFHGLSSGSVNWIMASPSPSISPPENPSDSSVSSPPSPSSPVESATSPSSPTSSEPNQTGEPPSSLSSSSAPPPQSPPAVPDAPPPSPPLSPPPLTASPPATPASPPPSPPAGSPPSPPQSSPSPPSPPPPSTPSSPPPPPPPSTSTSPPPPSTTSPPPSSASPPPPERSTTSPPPQTSPPPPDLSPPPPPAAADGSPPPASNPRPPSSTPSPPPPDTISPSPPPPTNVPTPPSSTGESPKVSPPSHKASPPPSDSQSPPSDNSPPPRSTVPSPPSSVPSSSAPPPVSDPGSPTNSSGGTPVTPPTSVTPERPIATINGTNVTANNSTTSKGGFSTGASVAVGSVVGVLVLSLVIMALWFVQKRKRRKKNIPYTMASPFSSQNSDSLFLRPHSSAPVVGSRTDSDFKYSSSEGGGVGNSRSFAYDDLHQATSGFSSNNLLGEGGFGCVYKGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDYQRLLVYDYVPNNTLHYHLHGENRPVLAWATRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKPVDSSQPLGDESLVEWARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVFDSAEQSAQIRMFQRMAFGSQDYSYGYSDRDRSRSYSQSHSSWSRESRDQSPSAPMNRSRQWNI 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7454804 7461325 + CrPI670011_11g010140.1 Cre11g1014 512759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1014 859 FunFam Proline-rich receptor-like protein kinase PERK8 475 577 - -
Cre11g1014 859 FunFam proline-rich receptor-like protein kinase PERK8 578 790 - -
Cre11g1014 859 MobiDBLite consensus disorder prediction 832 859 - -
Cre11g1014 859 Gene3D Phosphorylase Kinase; domain 1 473 577 - -
Cre11g1014 859 MobiDBLite consensus disorder prediction 821 859 - -
Cre11g1014 859 SMART serkin_6 502 758 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1014 859 SUPERFAMILY Protein kinase-like (PK-like) 485 775 IPR011009 -
Cre11g1014 859 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 385 811 IPR047117 -
Cre11g1014 859 CDD STKc_IRAK 508 778 - -
Cre11g1014 859 MobiDBLite consensus disorder prediction 86 134 - -
Cre11g1014 859 MobiDBLite consensus disorder prediction 86 395 - -
Cre11g1014 859 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524(InterPro)
Cre11g1014 859 ProSiteProfiles Protein kinase domain profile. 502 763 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1014 859 MobiDBLite consensus disorder prediction 135 359 - -
Cre11g1014 859 Gene3D Transferase(Phosphotransferase) domain 1 578 790 - -
Cre11g1014 859 Pfam Protein tyrosine and serine/threonine kinase 505 775 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1014 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1014 859 MobiDBLite consensus disorder prediction 360 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g2392 Cre-Chr10:37962893 Cre11g1014 Cre-Chr11:7454804 6.90E-72 dispersed
Cre11g0587 Cre-Chr11:2970653 Cre11g1014 Cre-Chr11:7454804 4.30E-73 dispersed
Cre11g0934 Cre-Chr11:6612529 Cre11g1014 Cre-Chr11:7454804 4.70E-123 dispersed
Cre11g0996 Cre-Chr11:7251364 Cre11g1014 Cre-Chr11:7454804 1.20E-72 dispersed
Cre11g1014 Cre-Chr11:7454804 Cre11g2267 Cre-Chr11:34447006 3.40E-78 dispersed
Cre11g1657 Cre-Chr11:27819523 Cre11g1014 Cre-Chr11:7454804 3.40E-69 dispersed
Cre11g1728 Cre-Chr11:28899094 Cre11g1014 Cre-Chr11:7454804 8.10E-66 dispersed
Cre02g0547 Cre-Chr2:2571349 Cre11g1014 Cre-Chr11:7454804 9.90E-67 transposed
Cre02g2434 Cre-Chr2:37710187 Cre11g1014 Cre-Chr11:7454804 7.90E-58 transposed
Cre05g2700 Cre-Chr5:37929580 Cre11g1014 Cre-Chr11:7454804 1.20E-139 transposed
Cre11g1014 Cre-Chr11:7454804 Cre04g0723 Cre-Chr4:25370642 5.90E-57 wgd
Cre11g1014 Cre-Chr11:7454804 Cre05g2494 Cre-Chr5:36345912 3.20E-145 wgd
Cre11g1014 Cre-Chr11:7454804 Cre07g1976 Cre-Chr7:35186442 2.70E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64541 PF07714 PK_Tyr_Ser-Thr 1.60E-45 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1014 - - - 0.0