Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre11g1018 | ATGGCGGTTCCCCTGGTTCAGTTCCCGATCTTCATGGCTGTCAGAGTCCTCGGGATGCTTGTGGCAGCTCTTCTGTTCATTTGGACTTTGCACTTCCGTGGAGGATTAGCACTTATCTCAGAAAACAAGGATCACATCTTCAATGTCCATCCCGTTCTTATGGTGATTGGACTTATTCTTCTTAATGGTGAAGCAATGTTAGCATACAAGACAGTTTCAGGAACCAAGAACTTTAGAAAACTAGTTCATCTTGCACTCCAATTTGTTGCATTCTTTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAATGACAAAGGAATCGACAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTATCTTTCTGTTTGGCATCCAGTGGTCTGCAGGTTTTGTAACCTTTTGGTACCCAGGTGGCTCTAGAAACAGCAGAGCTACTCTGTTGCCATGGCACGTTTTCTTTGGCATTTACATATATGGCCTTTCAATTGCTACAACTGTTACTGGATTGTTAGAAAAAGCTACATTCCTTCAAACCAGCAAGGTAATATTGCGCTATTCGAATGAGGCCTTGCTGATAAATTCATTGGGTGTCCTCATTGTTCTCTTGGGTGGTCTCGTGATTCTGGCGGTTATCGCTCCGTCGAACGCCAAAGGTGATGTTAACAGAGGACTAGCAGAGTAG | 699 | 43.78 | MAVPLVQFPIFMAVRVLGMLVAALLFIWTLHFRGGLALISENKDHIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLALQFVAFFLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWSAGFVTFWYPGGSRNSRATLLPWHVFFGIYIYGLSIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGVLIVLLGGLVILAVIAPSNAKGDVNRGLAE | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 7503153 | 7505251 | + | CrPI670011_11g010180.1 | Cre11g1018 | 512763 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre11g1018 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Cre11g1018 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Cre11g1018 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 217 | IPR006593 | - | |
| Cre11g1018 | 232 | PANTHER | CYTOCHROME B561-RELATED | 1 | 221 | IPR043205 | GO:0016491(PANTHER)|GO:0016491(InterPro) | |
| Cre11g1018 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Cre11g1018 | 232 | CDD | Cyt_b561_ACYB-1_like | 40 | 183 | - | - | |
| Cre11g1018 | 232 | Gene3D | - | 2 | 229 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre07g1038 | Cre-Chr7:15158155 | Cre11g1018 | Cre-Chr11:7503153 | 2.10E-40 | transposed | |
| Cre09g1265 | Cre-Chr9:17083777 | Cre11g1018 | Cre-Chr11:7503153 | 1.70E-53 | transposed | |
| Cre09g1856 | Cre-Chr9:37043164 | Cre11g1018 | Cre-Chr11:7503153 | 4.10E-44 | transposed | |
| Cre11g1018 | Cre-Chr11:7503153 | Cre05g2484 | Cre-Chr5:36216828 | 2.50E-44 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre11g1018 | K08360 | - | csv:101212633 | 415.616 |