Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1018 ATGGCGGTTCCCCTGGTTCAGTTCCCGATCTTCATGGCTGTCAGAGTCCTCGGGATGCTTGTGGCAGCTCTTCTGTTCATTTGGACTTTGCACTTCCGTGGAGGATTAGCACTTATCTCAGAAAACAAGGATCACATCTTCAATGTCCATCCCGTTCTTATGGTGATTGGACTTATTCTTCTTAATGGTGAAGCAATGTTAGCATACAAGACAGTTTCAGGAACCAAGAACTTTAGAAAACTAGTTCATCTTGCACTCCAATTTGTTGCATTCTTTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAATGACAAAGGAATCGACAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTATCTTTCTGTTTGGCATCCAGTGGTCTGCAGGTTTTGTAACCTTTTGGTACCCAGGTGGCTCTAGAAACAGCAGAGCTACTCTGTTGCCATGGCACGTTTTCTTTGGCATTTACATATATGGCCTTTCAATTGCTACAACTGTTACTGGATTGTTAGAAAAAGCTACATTCCTTCAAACCAGCAAGGTAATATTGCGCTATTCGAATGAGGCCTTGCTGATAAATTCATTGGGTGTCCTCATTGTTCTCTTGGGTGGTCTCGTGATTCTGGCGGTTATCGCTCCGTCGAACGCCAAAGGTGATGTTAACAGAGGACTAGCAGAGTAG 699 43.78 MAVPLVQFPIFMAVRVLGMLVAALLFIWTLHFRGGLALISENKDHIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLALQFVAFFLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWSAGFVTFWYPGGSRNSRATLLPWHVFFGIYIYGLSIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGVLIVLLGGLVILAVIAPSNAKGDVNRGLAE 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 7503153 7505251 + CrPI670011_11g010180.1 Cre11g1018 512763
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1018 232 SMART 561_7 49 175 IPR006593 -
Cre11g1018 232 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Cre11g1018 232 ProSiteProfiles Cytochrome b561 domain profile. 13 217 IPR006593 -
Cre11g1018 232 PANTHER CYTOCHROME B561-RELATED 1 221 IPR043205 GO:0016491(PANTHER)|GO:0016491(InterPro)
Cre11g1018 232 FunFam Cytochrome b reductase 1 4 225 - -
Cre11g1018 232 CDD Cyt_b561_ACYB-1_like 40 183 - -
Cre11g1018 232 Gene3D - 2 229 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1038 Cre-Chr7:15158155 Cre11g1018 Cre-Chr11:7503153 2.10E-40 transposed
Cre09g1265 Cre-Chr9:17083777 Cre11g1018 Cre-Chr11:7503153 1.70E-53 transposed
Cre09g1856 Cre-Chr9:37043164 Cre11g1018 Cre-Chr11:7503153 4.10E-44 transposed
Cre11g1018 Cre-Chr11:7503153 Cre05g2484 Cre-Chr5:36216828 2.50E-44 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1018 K08360 - csv:101212633 415.616