Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1122 ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCGTTAGGGTACAATGAGTCCAAGTTGGCGGTTATTATGGCATCTTTCATCATTCAGAAACCGCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTGAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAGCATTAACGCGGATGATGCCCACTCAAAGGGATGGCTTGGTCGTAGCACTGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCAAGAAGAAAACTGAACCAAGTAAATAAACCACGTTCTGCCAATTCCCCTGAGTATAGTAATACAGAGCTGAGGGAACCTGATGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACACAGTCCAAGAAACAGAAACTAAGATGGTAGAGATGTCTGCTCTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAACATCTTTATGAACAGGCTGTTGAAGCTACGAAGAATGTCGAGCTTGGTAATAAAGAACTTACCCAAGCAATTCAGCGGAATAGCAGCAGCAGAACCTTCCTTCTGCTTTTTCTATTTGTGCTCACCTTTTCAATTCTCTTTCTTGATTGGTACAACTCAAATAGTTACAATGTAAGTGGATTCGGAGGAGCGAACCATCTGCCACTTCAATTTCTCGAAGTTCCCTGCATTCATTTTTAG 1011 41.25 MAKFRDRTEDFKDVVRHCAISLGYNESKLAVIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQLDILKNSINADDAHSKGWLGRSTDDSNADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIISKAVPRRKLNQVNKPRSANSPEYSNTELREPDDNFEHQPVRAQQLLDDETRALQVELTSLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAVEATKNVELGNKELTQAIQRNSSSRTFLLLFLFVLTFSILFLDWYNSNSYNVSGFGGANHLPLQFLEVPCIHF 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8788041 8791107 - CrPI670011_11g011220.1 Cre11g1122 512867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1122 336 Gene3D - 212 306 - -
Cre11g1122 336 SUPERFAMILY t-snare proteins 61 273 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Cre11g1122 336 PANTHER SYNTAXIN-18 1 310 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
Cre11g1122 336 MobiDBLite consensus disorder prediction 174 196 - -
Cre11g1122 336 FunFam Syntaxin-81 like 212 306 - -
Cre11g1122 336 Pfam SNARE-complex protein Syntaxin-18 N-terminus 5 86 IPR019529 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1122 K08492 - csv:101207161 572.778