Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1145 ATGGCATCCATTTCGAAACGGCTACTCCTCTTCGCGGCGGCGCTACTCGCCACCGCTGAAATCGCAACCTCCATCACCCGATGCCGGGACTGTGGCGGCGCTTCCGTCCCCTATCCTCTGAGTACAAGCCCCACATGTGGGGACCAATCGTATAAGATCCGGTGCGACGCAGGCTCACTGAAATTCGACACGCTGAACAACACGTACCCGATCATCTCGATCAACCCGTCGATCCAACGGCTGGTGATTCAGCCCTCAAATTTCCTCCCGAACACGTGTGTGACAGCGGATATCGCTCACGACGGAATCAAATTGAACAGTAGTTTACCCTTCAACGTGACGAGCGGGAACACGATCCTGTACTTCAACTGTACGGACTCGCTTCTGCGCTCGCCGTTGAACTGCTCGTCGACGAGTCTGTGCCATTCGTACATCAACGGGTCAAGAGGAGCGGCGGCGTGCGAGGCGGCGCCGCTGTGCTGCACGTTTCGGGCGGGTGGGTCGTCGAATTCGTACATGATTCGGGTGAGGGAATCGGGGTGTAGCGCGTACACGAGCTTTGTGAACTTGAACCCGAGTTTGGGAGTGGTTCCGTGGCCCGAACCCGGGTTGGAGCTGCAGTGGCTTTTGCCGAGGGAGCCGGTTTGTAATACGCAGGCTGATTGTGATGTGAACGCGGTTTGTGGTGTTGACCCGAGTGGGACGGCGTTGAGACGCTGTCTTTGTAATTCTGGGTTTGTGTGGGACCCTGTTGCTGGAATCTGCTCTCAAAATACGTGTCATGATCCTGATGGTTGTAGTAAGCACCGAACTGCACTGATAGCTGGCATTGTATCCGGCGTGGGCGCGGCGTTGATCATCTCAACAATAGCAATGCTAGTGTACAATCGGCATAGAAGAGCGAAAGAAGCTCAAGATCGTTTAACAAAGGAGCGTGAAGCCATTCTGAATTCCAACGGCGGAGGCGGAAGGGCGGCAAAGATCTTCACCGGTAAAGAGATCAAGAGGGCCACCCACAACTTCTCCGTCGACCACCTTCTGGGTGTCGGCGGCTACGGTGAGGTCTACAAAGGCGTTCTCGGGGACGGAACCACCGTGGCCGTAAAGTGCGCCAAGCTCGGAAACGCAAAAGGGACCGACCAAGTCCTGAATGAGGTCCGAATCCTGTGCCAAGTTAACCACCGGAGTCTTGTCCGGCTCCTTGGCTGCTGCGTCGAACTAGAACAGCCAATTTTGGTGTACGAGTATATTCCCAACGGCACTCTTCTCGACCATTTACAAGGTATTAAAGACACAAGGCCACTATCATGGGAGGAACGACTCCGAATTGCGCAGGGAACAGCAGAGGGACTAGCATATCTTCATTTCTCAGCAGTTCCACCCATCTACCACCGAGACGTCAAATCTAGCAACATCCTCTTAGACCACAAGCTAATCCCCAAAGTTTCAGATTTCGGGCTCTCCCGATTGGCAGAAACAGATCTAAGCCATATCTCAACTTGCGCCCAAGGAACTCTAGGCTACCTGGACCCCGAGTACTATCGAAACTATCAATTAACGGACAAGAGCGACGTGTACAGCTTTGGAGTGGTTCTGCTTGAGCTATTGACATCGCAAAAGGCCATTGACTTCGGTCGTGAGGCTGACGACGTCAACTTGGCAGTTTATGTGCAACGGCTGGTGGAGGAAGAGAGATTGGTGGATGCCATTGATCCGTGGCTGAAGAAGGGAGCTACAGATGTGGAGGTTGATACGATGAAGGCTTTGGGGTTCCTTGCAGTGGGGTGCTTGGAACAGAGAAGGCAGAACCGACCTTCTATGAAAGAAGTGGTGGAGGAGATTCAATACATCATTAGCATCGCCATTGCTAAGGCTTAA 1878 53.41 MASISKRLLLFAAALLATAEIATSITRCRDCGGASVPYPLSTSPTCGDQSYKIRCDAGSLKFDTLNNTYPIISINPSIQRLVIQPSNFLPNTCVTADIAHDGIKLNSSLPFNVTSGNTILYFNCTDSLLRSPLNCSSTSLCHSYINGSRGAAACEAAPLCCTFRAGGSSNSYMIRVRESGCSAYTSFVNLNPSLGVVPWPEPGLELQWLLPREPVCNTQADCDVNAVCGVDPSGTALRRCLCNSGFVWDPVAGICSQNTCHDPDGCSKHRTALIAGIVSGVGAALIISTIAMLVYNRHRRAKEAQDRLTKEREAILNSNGGGGRAAKIFTGKEIKRATHNFSVDHLLGVGGYGEVYKGVLGDGTTVAVKCAKLGNAKGTDQVLNEVRILCQVNHRSLVRLLGCCVELEQPILVYEYIPNGTLLDHLQGIKDTRPLSWEERLRIAQGTAEGLAYLHFSAVPPIYHRDVKSSNILLDHKLIPKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFGREADDVNLAVYVQRLVEEERLVDAIDPWLKKGATDVEVDTMKALGFLAVGCLEQRRQNRPSMKEVVEEIQYIISIAIAKA 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9056123 9059172 - CrPI670011_11g011450.1 Cre11g1145 512890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1145 625 FunFam Wall-associated receptor kinase-like 20 417 625 - -
Cre11g1145 625 SUPERFAMILY Protein kinase-like (PK-like) 327 613 IPR011009 -
Cre11g1145 625 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524(InterPro)
Cre11g1145 625 Gene3D Phosphorylase Kinase; domain 1 317 416 - -
Cre11g1145 625 CDD STKc_IRAK 347 615 - -
Cre11g1145 625 SMART serkin_6 341 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1145 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1145 625 Gene3D Transferase(Phosphotransferase) domain 1 417 622 - -
Cre11g1145 625 Pfam Protein tyrosine and serine/threonine kinase 343 613 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1145 625 FunFam Wall-associated receptor kinase-like 20 302 416 - -
Cre11g1145 625 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1145 625 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 28 617 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1487 Cre-Chr8:27685260 Cre11g1145 Cre-Chr11:9056123 2.00E-81 dispersed
Cre10g2067 Cre-Chr10:35359230 Cre11g1145 Cre-Chr11:9056123 1.40E-161 dispersed
Cre11g1145 Cre-Chr11:9056123 Cre11g1337 Cre-Chr11:14037115 9.30E-78 dispersed
Cre11g1145 Cre-Chr11:9056123 Cre04g0891 Cre-Chr4:27558924 4.60E-186 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64547 PF00069 Pkinase 7.00E-44 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1145 - - - 0.0