Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1147 ATGGAGTTTCTTGAGCTTAAAGCCGCCGCCGATAATGCCGGCGGTGCTTCCTCGTCCGGACGGAAACGCCGGAGCGTGCAACCGTTTCCACGGCGGTGGGAAAATGAAGACGATGAAAACAGGGGGCAGAGGAATGATGATGAGGTTGAAGTTAAATATGGGGTTACCTCTGTTTGCGGAAGAAAAAGAGAAATGGAAGACACGGTTTCTGTTCATCTTTACTTTGCTACTCAAAAAAATGAACCCCAAATTCCTCTTCATTTTTTTGGGGTGTTCGACGGCCATGGTTGCTCTCATGTGTCGAAGAGCTGTAAGAATCGAATGCATGACATAGTGAAAGAAGAGATTGATGAAATGAAAATAGAAGAAACAGAGGAATGGAAGAAAATAATGAGAAGAAGCTTTAGGCGTATGGATGGGGAAGTAATGAAACAGAGAGAAGAAGCCTCTTCTTCTGAATCTAATAATATTAGTTGTAGATGCGAACTTCAAACTCCAAATCGATACGACACCGTTAGATCCAATGCTCTCATTGCTCTCTTAATGCCACACAAGTTCATCATCGCCAACTGCGGCGATTCCCGCGCCGTCCTTTCCCGGAAAACTACCGGAATCCTCCCTCTCTCCTCCGACCATAAGCCAGATCGAGGAGATGAATTGTCACGAATAGAGTCATGTGGAGGGCGCGTGATATACCGGGAAGGGGCAAGAGTGTTGGGAGTTTATGCAACATCAAGAGCAATAGGCGATGGTTGTTTAAAGCCTTACGTGATATCGGAGCCGGAGGTGGTGATTATGGATCGAACAGCGGAGGATGAGTTCATGATATTGGCTACCGATGGCCTGTGGGACGTGGTTACAAATGAAACTGCATGCGACGCAGTCCGAACGTGCATGCGTGCACACCACCCGTTGTCGTCCTCGTCAGAATCGTCGGGATCTATGAGTGGCGGCTCTGACAAAACATGTTCCGACGCCTCCATTTTACTGACCAAGTTGGCCATGGCCAAGCATAGTTCAGATAACATTACCATTGTGGTTATAGATTTGAGAACAACATCATCACCACAACCAAAGCATTGA 1083 46.91 MEFLELKAAADNAGGASSSGRKRRSVQPFPRRWENEDDENRGQRNDDEVEVKYGVTSVCGRKREMEDTVSVHLYFATQKNEPQIPLHFFGVFDGHGCSHVSKSCKNRMHDIVKEEIDEMKIEETEEWKKIMRRSFRRMDGEVMKQREEASSSESNNISCRCELQTPNRYDTVRSNALIALLMPHKFIIANCGDSRAVLSRKTTGILPLSSDHKPDRGDELSRIESCGGRVIYREGARVLGVYATSRAIGDGCLKPYVISEPEVVIMDRTAEDEFMILATDGLWDVVTNETACDAVRTCMRAHHPLSSSSESSGSMSGGSDKTCSDASILLTKLAMAKHSSDNITIVVIDLRTTSSPQPKH 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9076453 9077691 - CrPI670011_11g011470.1 Cre11g1147 512892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1147 360 MobiDBLite consensus disorder prediction 27 48 - -
Cre11g1147 360 ProSiteProfiles PPM-type phosphatase domain profile. 52 350 IPR001932 -
Cre11g1147 360 SUPERFAMILY PP2C-like 51 351 IPR036457 -
Cre11g1147 360 FunFam Protein phosphatase 2C 50 51 357 - -
Cre11g1147 360 CDD PP2Cc 51 350 IPR001932 -
Cre11g1147 360 SMART PP2C_4 42 348 IPR001932 -
Cre11g1147 360 MobiDBLite consensus disorder prediction 1 48 - -
Cre11g1147 360 Pfam Protein phosphatase 2C 52 343 IPR001932 -
Cre11g1147 360 Gene3D - 42 356 IPR036457 -
Cre11g1147 360 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169(InterPro)
Cre11g1147 360 PANTHER PROTEIN PHOSPHATASE 43 349 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1069 Cre-Chr5:9954650 Cre11g1147 Cre-Chr11:9076453 2.60E-55 dispersed
Cre08g0939 Cre-Chr8:22579871 Cre11g1147 Cre-Chr11:9076453 1.10E-49 dispersed
Cre09g0017 Cre-Chr9:475703 Cre11g1147 Cre-Chr11:9076453 9.20E-16 dispersed
Cre11g1147 Cre-Chr11:9076453 Cre11g1291 Cre-Chr11:11882183 4.60E-21 dispersed
Cre11g1147 Cre-Chr11:9076453 Cre03g0435 Cre-Chr3:2773531 2.80E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1147 K14497 - csv:101220425 495.738