Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g1147 | ATGGAGTTTCTTGAGCTTAAAGCCGCCGCCGATAATGCCGGCGGTGCTTCCTCGTCCGGACGGAAACGCCGGAGCGTGCAACCGTTTCCACGGCGGTGGGAAAATGAAGACGATGAAAACAGGGGGCAGAGGAATGATGATGAGGTTGAAGTTAAATATGGGGTTACCTCTGTTTGCGGAAGAAAAAGAGAAATGGAAGACACGGTTTCTGTTCATCTTTACTTTGCTACTCAAAAAAATGAACCCCAAATTCCTCTTCATTTTTTTGGGGTGTTCGACGGCCATGGTTGCTCTCATGTGTCGAAGAGCTGTAAGAATCGAATGCATGACATAGTGAAAGAAGAGATTGATGAAATGAAAATAGAAGAAACAGAGGAATGGAAGAAAATAATGAGAAGAAGCTTTAGGCGTATGGATGGGGAAGTAATGAAACAGAGAGAAGAAGCCTCTTCTTCTGAATCTAATAATATTAGTTGTAGATGCGAACTTCAAACTCCAAATCGATACGACACCGTTAGATCCAATGCTCTCATTGCTCTCTTAATGCCACACAAGTTCATCATCGCCAACTGCGGCGATTCCCGCGCCGTCCTTTCCCGGAAAACTACCGGAATCCTCCCTCTCTCCTCCGACCATAAGCCAGATCGAGGAGATGAATTGTCACGAATAGAGTCATGTGGAGGGCGCGTGATATACCGGGAAGGGGCAAGAGTGTTGGGAGTTTATGCAACATCAAGAGCAATAGGCGATGGTTGTTTAAAGCCTTACGTGATATCGGAGCCGGAGGTGGTGATTATGGATCGAACAGCGGAGGATGAGTTCATGATATTGGCTACCGATGGCCTGTGGGACGTGGTTACAAATGAAACTGCATGCGACGCAGTCCGAACGTGCATGCGTGCACACCACCCGTTGTCGTCCTCGTCAGAATCGTCGGGATCTATGAGTGGCGGCTCTGACAAAACATGTTCCGACGCCTCCATTTTACTGACCAAGTTGGCCATGGCCAAGCATAGTTCAGATAACATTACCATTGTGGTTATAGATTTGAGAACAACATCATCACCACAACCAAAGCATTGA | 1083 | 46.91 | MEFLELKAAADNAGGASSSGRKRRSVQPFPRRWENEDDENRGQRNDDEVEVKYGVTSVCGRKREMEDTVSVHLYFATQKNEPQIPLHFFGVFDGHGCSHVSKSCKNRMHDIVKEEIDEMKIEETEEWKKIMRRSFRRMDGEVMKQREEASSSESNNISCRCELQTPNRYDTVRSNALIALLMPHKFIIANCGDSRAVLSRKTTGILPLSSDHKPDRGDELSRIESCGGRVIYREGARVLGVYATSRAIGDGCLKPYVISEPEVVIMDRTAEDEFMILATDGLWDVVTNETACDAVRTCMRAHHPLSSSSESSGSMSGGSDKTCSDASILLTKLAMAKHSSDNITIVVIDLRTTSSPQPKH | 360 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9076453 | 9077691 | - | CrPI670011_11g011470.1 | Cre11g1147 | 512892 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g1147 | 360 | MobiDBLite | consensus disorder prediction | 27 | 48 | - | - | |
Cre11g1147 | 360 | ProSiteProfiles | PPM-type phosphatase domain profile. | 52 | 350 | IPR001932 | - | |
Cre11g1147 | 360 | SUPERFAMILY | PP2C-like | 51 | 351 | IPR036457 | - | |
Cre11g1147 | 360 | FunFam | Protein phosphatase 2C 50 | 51 | 357 | - | - | |
Cre11g1147 | 360 | CDD | PP2Cc | 51 | 350 | IPR001932 | - | |
Cre11g1147 | 360 | SMART | PP2C_4 | 42 | 348 | IPR001932 | - | |
Cre11g1147 | 360 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Cre11g1147 | 360 | Pfam | Protein phosphatase 2C | 52 | 343 | IPR001932 | - | |
Cre11g1147 | 360 | Gene3D | - | 42 | 356 | IPR036457 | - | |
Cre11g1147 | 360 | ProSitePatterns | PPM-type phosphatase domain signature. | 88 | 96 | IPR000222 | GO:0043169(InterPro) | |
Cre11g1147 | 360 | PANTHER | PROTEIN PHOSPHATASE | 43 | 349 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g1069 | Cre-Chr5:9954650 | Cre11g1147 | Cre-Chr11:9076453 | 2.60E-55 | dispersed | |
Cre08g0939 | Cre-Chr8:22579871 | Cre11g1147 | Cre-Chr11:9076453 | 1.10E-49 | dispersed | |
Cre09g0017 | Cre-Chr9:475703 | Cre11g1147 | Cre-Chr11:9076453 | 9.20E-16 | dispersed | |
Cre11g1147 | Cre-Chr11:9076453 | Cre11g1291 | Cre-Chr11:11882183 | 4.60E-21 | dispersed | |
Cre11g1147 | Cre-Chr11:9076453 | Cre03g0435 | Cre-Chr3:2773531 | 2.80E-87 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g1147 | K14497 | - | csv:101220425 | 495.738 |