Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre11g1191 | ATGGCAGCCATGGCAATGCGAGTGGTGGTGTCATTGGCTCTTCTCTTCATTCTCATTGGGGTCGCCCAGGCCCAGCTCTCCCTCAACTTCTACAATTCAACGTGCCCAAATGTCGAACAAATCGTTCGCCAGGCCGTCACCCTAAAGTTTAACCAAACATTCGTTACTGTTCCCGCAACTCTAAGGCTCTTCTTCCATGACTGCTTTGTTCAGGGATGTGATGCTTCGGTTATGATAGCATCCGCAAGTGGTGATGCAGAAAAAGACGCCGAGGACAACTTGTCATTGGCAGGAGATGGATTTGATACCGTGGTTAAAGCTAAACAAGCAGTGGAAGCTCAATGTCCTGGAATAGTATCGTGTGCGGATGTATTAGCCATCGCTGCAAGGGATGTTGTGGTTTTGGCAAGAGGGCCAAATTTCGCTGTGGAATTAGGACGGCGAGACGGGCTAATCTCGAAAGCATCTTTAGTAGCCGGAAACTTACCGGGACCAAACTTCAACCTGAGCGAATTAAACGCAATGTTCGCCAAAAACAACTTAACCCAAACTGAAATGATTGCGTTATCAGGAGCTCACACGGTTGGGTTCTCACATTGCAACCGTTTTGCGAACCGTCTCTACAACTTCTCGGCCACGTCTAATGTGGACCCTTCTCTGGACTCGGACTACGCCCAGCAGCTCATAGACGCCTGCCCACAAAACGTGGATCCCAGAGTGGCTGTGGACATGGACCCTATTACCCCAAGGAAAATGGATAATGTGTATTACCAAAATCTTGTGAACCACAAGGGGCTATTCACGTCGGATCAGGTGCTTTTTACGGACCCGTTGTCGCAACCGACGGTGAGTGGCTTTGCTAATGACAATCATGGGTTCAAGAAAGCGTTTGCGGCGGCTATGGTTCAGCTTGGGAGAGTGGGGGTTAAGACTGGGGTTTTGGGTGAGATTAGAACTGATTTAGGAGAAAATGATAATGACTCTGATGATGAAGATGTTTTTGAAATACTAGAGGATCATTTTGGTGCTTTTAACACCAACAATTGGATTGAATCTTCTTGTAGAGGAAAAAAAGCACGTGGTCCCACACGTAATCTCAAATTGGTTAAACTACCTCATGGAATTAGATTTGAAGTATCATGGAGGAACAAACGACCCGTTGGAGATAATGCTGATATCTTTAAAAGTCAATGCACTATCTTAGCTAGACAAGTCAACTTTACTCCTCTACAAGTGAAAAGTTGGAGAGATGTTGATACAACAACAAAAAGGAAACTATTTGAGCTTACATTGGAGATGTGTGAAAGAAACCAAAAGAACCGTGCAAAATTGAATGTATATCACACATGTGGTTCACAAAGTATACAACAAAGAGTTGAAAATGAGGTTCGAGACACTAATGAAGAACCTAGTCAAATTAGAATTTGGGAGCTAACTCACTTGAGCAATAATGGATTGGCTGTGAATGAAACTACACAAGAAAAAATGTTGGAACTTAAATCATATGCTTCTCAAGTGATCGATGGTACACTTGACATGAACGAGGATGAGATTTTTGTACGAGTATTTGGACCGGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTTCTGAATTGTTTGGATCATCGTCTAATATATGCGATCTTGAACGTCGCCTTAATGAGTCCGAACAACGTCTTCAAGAATCTGAACGACAAAGAAAAGAATCTGAACAACAAAGAAAAGTTGAGGTAGAAGCACTTAAGCATCAAATGAGTGAATTAGAAAATCGTTTTGATGATAGATTTCAAAAAATGATGGCAGAGATGCGTAAAGAATTTGTTTCTAGTTGA | 1845 | 42.93 | MAAMAMRVVVSLALLFILIGVAQAQLSLNFYNSTCPNVEQIVRQAVTLKFNQTFVTVPATLRLFFHDCFVQGCDASVMIASASGDAEKDAEDNLSLAGDGFDTVVKAKQAVEAQCPGIVSCADVLAIAARDVVVLARGPNFAVELGRRDGLISKASLVAGNLPGPNFNLSELNAMFAKNNLTQTEMIALSGAHTVGFSHCNRFANRLYNFSATSNVDPSLDSDYAQQLIDACPQNVDPRVAVDMDPITPRKMDNVYYQNLVNHKGLFTSDQVLFTDPLSQPTVSGFANDNHGFKKAFAAAMVQLGRVGVKTGVLGEIRTDLGENDNDSDDEDVFEILEDHFGAFNTNNWIESSCRGKKARGPTRNLKLVKLPHGIRFEVSWRNKRPVGDNADIFKSQCTILARQVNFTPLQVKSWRDVDTTTKRKLFELTLEMCERNQKNRAKLNVYHTCGSQSIQQRVENEVRDTNEEPSQIRIWELTHLSNNGLAVNETTQEKMLELKSYASQVIDGTLDMNEDEIFVRVFGPEKHGRVRGYGVGVTPSELFGSSSNICDLERRLNESEQRLQESERQRKESEQQRKVEVEALKHQMSELENRFDDRFQKMMAEMRKEFVSS | 614 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 9722489 | 9731091 | + | CrPI670011_11g011910.1 | Cre11g1191 | 512936 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre11g1191 | 614 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 320 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | CDD | secretory_peroxidase | 25 | 320 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
| Cre11g1191 | 614 | ProSiteProfiles | Plant heme peroxidase family profile. | 25 | 325 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PANTHER | - | 9 | 321 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | Pfam | Plant transposase (Ptta/En/Spm family) | 432 | 540 | IPR004252 | - | |
| Cre11g1191 | 614 | FunFam | Peroxidase | 163 | 304 | - | - | |
| Cre11g1191 | 614 | FunFam | Peroxidase | 29 | 171 | - | - | |
| Cre11g1191 | 614 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 185 | 195 | IPR019793 | - | |
| Cre11g1191 | 614 | PRINTS | Plant peroxidase signature | 59 | 79 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Plant peroxidase signature | 184 | 196 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Plant peroxidase signature | 137 | 152 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Plant peroxidase signature | 118 | 128 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Plant peroxidase signature | 99 | 112 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Plant peroxidase signature | 243 | 258 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Plant peroxidase signature | 259 | 276 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Plant peroxidase signature | 299 | 312 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Plant peroxidase signature | 35 | 54 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Haem peroxidase superfamily signature | 137 | 149 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Haem peroxidase superfamily signature | 245 | 260 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Haem peroxidase superfamily signature | 57 | 71 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Haem peroxidase superfamily signature | 185 | 200 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | PRINTS | Haem peroxidase superfamily signature | 119 | 136 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | Pfam | Peroxidase | 42 | 289 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre11g1191 | 614 | Gene3D | - | 29 | 320 | - | - | |
| Cre11g1191 | 614 | Gene3D | Peroxidase, domain 2 | 163 | 304 | - | - | |
| Cre11g1191 | 614 | Coils | Coil | 550 | 602 | - | - | |
| Cre11g1191 | 614 | ProSitePatterns | Peroxidases active site signature. | 57 | 68 | IPR019794 | GO:0004601(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g1921 | Cre-Chr5:31381953 | Cre11g1191 | Cre-Chr11:9722489 | 3.70E-102 | dispersed | |
| Cre05g2011 | Cre-Chr5:32133140 | Cre11g1191 | Cre-Chr11:9722489 | 9.90E-81 | dispersed | |
| Cre10g1052 | Cre-Chr10:20716309 | Cre11g1191 | Cre-Chr11:9722489 | 2.40E-130 | dispersed | |
| Cre10g1450 | Cre-Chr10:28339605 | Cre11g1191 | Cre-Chr11:9722489 | 3.50E-61 | dispersed | |
| Cre11g1083 | Cre-Chr11:8306662 | Cre11g1191 | Cre-Chr11:9722489 | 1.10E-47 | dispersed | |
| Cre11g1191 | Cre-Chr11:9722489 | Cre11g1193 | Cre-Chr11:9770968 | 2.40E-118 | dispersed | |
| Cre11g2230 | Cre-Chr11:34060218 | Cre11g1191 | Cre-Chr11:9722489 | 6.00E-22 | dispersed | |
| Cre11g1191 | Cre-Chr11:9722489 | Cre11g1192 | Cre-Chr11:9735754 | 3.90E-97 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre11g1191 | K00430 | - | csv:101213098 | 552.362 |